Protein Alignment Usp1 and Usp12

DIOPT Version :9

• Sequence 1: NP_001263061.1
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_001160048.1
• Gene: Usp12 / 360763
• RGDID: 1308045
• Length: 370
• Species: Rattus norvegicus
• Alignment Length: 562
• Identity: 101/562 - (17%)
• Similarity: 155/562 - (27%)
• Gaps: 274/562 - (48%)

  Fly   269 GSSSNEIE-----SQEPQSHQYYGPNGGSNAAGAGAGLNGSAAALNHAPSMGTLCNIGNSCYLNS 328
            |::::.:|     .|.|.:..|:|                             |.|.||:||.||
  Rat    17 GANASALEKEIGPEQFPVNEHYFG-----------------------------LVNFGNTCYCNS 52

  Fly   329 VVYTLRFAPHFLHNLHHLIQDLNVVQQTIVRQQTARSASLGKNVSAAQLEHARSWSSKDLATSTD 393
            |:..|.|                                            .|.:..|.||
  Rat    53 VLQALYF--------------------------------------------CRPFRDKVLA---- 69

  Fly   394 QYSGQNGGVNSGNGGSGSSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADTLLHAIQDVNATF 458
             |..|              ....:|:...|.:|::::...:......|  ....:..::..|..|
  Rat    70 -YKSQ--------------PRKKESLLTCLADLFHSIATQKKKVGVIP--PKKFITRLRKENELF 117

  Fly   459 EGNQQQDAHEFLMCVLNCIRETNQSLIKAIGECPEVIANGYIANPDEVDTGEGQDRTDSTASQNL 523
            :...||||||||..:||.|.:..|
  Rat   118 DNYMQQDAHEFLNYLLNTIADILQ----------------------------------------- 141

  Fly   524 NAGNGSLATSQTTTTKTSFFSRKSKRKDEVKPSKSTRVQSPLKENSPTAGGITGAGTAHATANSL 588
                                   .:||.|             |:|.....|
  Rat   142 -----------------------EERKQE-------------KQNGRLRNG-------------- 156

  Fly   589 FYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQATKYSSDDEMNSATVLKDKMRLEERIRE 653
                .||....:||                  |.|..                         :.|
  Rat   157 ----DVDSEDNNST------------------PDPTW-------------------------VHE 174

  Fly   654 LNLNFFSSDFEGIVVLTTKCLSCETITRQKQGMLDISVPVPISGYDNADLQDKPSTYIQNSCIT- 717
            :        |:|.:...|:||:||||:.:.:..||:||.|.                 ||:.||
  Rat   175 I--------FQGTLTNETRCLTCETISSKDEDFLDLSVDVE-----------------QNTSITH 214

  Fly   718 -------KEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQLNRFSGGMEKVSTYVPTTF-- 773
                   .|....|.||.|.:|....||.:.:..:.||.:|.:.|.||. .|:::..|...::
  Rat   215 CLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFK-YMDQLHRYTKLSYRV 278

  Fly   774 TLPCFCATCCELGEG-NKLHVYKLYSVITHVGATLTVGHYIA 814
            ..|.........|:. |...:|.|.:|:.|.|:....|||||
  Rat   279 VFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIA 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_001263061.1	Peptidase_C19	308..819	CDD:271592	95/518 (18%)
Usp12	NP_001160048.1	Peptidase_C19G	40..367	CDD:239128	96/539 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1864
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900