Protein Alignment Usp1 and Usp14

DIOPT Version :9

• Sequence 1: NP_001263061.1
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_001260321.1
• Gene: Usp14 / 34387
• FlyBaseID: FBgn0032216
• Length: 475
• Species: Drosophila melanogaster
• Alignment Length: 514
• Identity: 90/514 - (17%)
• Similarity: 151/514 - (29%)
• Gaps: 208/514 - (40%)

  Fly   317 LCNIGNSCYLNSVVYTLRFAPHFLHNLHHLIQDLNVVQQTIVRQQTARSASLGKNVSAAQLEHAR 381
            |.|:||:||:|:.|..|...|
  Fly   106 LTNLGNTCYMNATVQCLNAVP-------------------------------------------- 126

  Fly   382 SWSSKDLATSTDQYSGQNGGVNSGNGGSGSSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADT 446
                 :|.|:...:|         |.|: .:.||..|::..:..::..:   |...:..|.   .
  Fly   127 -----ELRTALSTFS---------NDGT-DTMSTAFSISSAMKSIFAQM---EKGTTVTPI---V 170

  Fly   447 LLHAIQDVNATFEGN------QQQDAH----EFLMCVLNCIRETNQSLIKAIGECPEVIANGYIA 501
            ||.|:...:..|...      :||||:    |.|..:...:|..||.....:.:......:.:..
  Fly   171 LLQALHRASPQFAQTGENGTYRQQDANECWAEILKMLQQKLRPKNQEPSNTVQKRHSSFIDQFFG 235

  Fly   502 NPDEVDTGEGQDRTDSTASQNLNAGNGSLATSQTTTTKTSFFSRKSKRKDEVKPSKS---TRVQS 563
            ...||.....:|..:.           |..||:.....:.|.|.      :||..:|   ::::.
  Fly   236 GTFEVKMSSEEDPDEP-----------STVTSENFLQLSCFISM------DVKYMQSGLKSKMKE 283

  Fly   564 PLKENSPTAGGITGAGTAHATANSLFYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQATK 628
            .|.:.|.|.|            ....|:.|..:|                 ...|.|.......:
  Fly   284 QLVKKSETLG------------RDAKYIRTYLVS-----------------RLPAYLTVQFVRFQ 319

  Fly   629 YSSDDEMNSATVLKDKMRLEERIRELNLNFFSSDFEGIVVLTTKCLS--CETITRQKQGMLDISV 691
            |...:.:| |.||||       |:      |..||:...:.|.:..:  |...::.|
  Fly   320 YKGKEGIN-AKVLKD-------IK------FPIDFDAFELCTPELQNKLCPMRSKFK-------- 362

  Fly   692 PVPISGYDNADLQDKPSTYIQNSCITKEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQLN 756
                      ||:||.    ....:.|.....|.|             :.:.||..
  Fly   363 ----------DLEDKK----MEVDVVKRNEPNEEK-------------KDVKYEQF--------- 391

  Fly   757 RFSGGMEKVSTYVPTTFTLPCFCATCCELGEGNKLHVYKLYSVITHVGATLTVGHYIAY 815
            .|..                       :||..|..: |.|.:|:||.|.:.:.|||:|:
  Fly   392 WFDD-----------------------DLGSNNSGY-YTLQAVLTHKGRSSSSGHYVAW 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_001263061.1	Peptidase_C19	308..819	CDD:271592	90/514 (18%)
Usp14	NP_001260321.1	UBQ	4..73	CDD:214563
		UBQ	5..73	CDD:294102
		UCH	103..467	CDD:278850	90/514 (18%)
		Peptidase_C19A	105..467	CDD:239122	90/514 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456838
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930