Protein Alignment Usp1 and usp1

DIOPT Version :9

• Sequence 1: NP_001263061.1
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_955873.1
• Gene: usp1 / 322007
• ZFINID: ZDB-GENE-030131-726
• Length: 772
• Species: Danio rerio
• Alignment Length: 910
• Identity: 207/910 - (22%)
• Similarity: 341/910 - (37%)
• Gaps: 242/910 - (26%)

  Fly   223 KSGAAGARSSRKRTNTMSLYDRRFQTTTEERRVANGYGGNAARSVTGSSSN-EIESQEPQSHQYY 286
            :||...|..|..:.:.:||   :|....|.:|..     :.:.:....:|| ..|.||...|...
Zfish     7 ESGVVAAAGSPVKKSKLSL---KFFQKKETKRAL-----DFSEAPPEDNSNVTTEPQETICHDQV 63

  Fly   287 GPNGGSNAAGAGAGLNGSAAAL------NHAPSMGTLCNIGNSCYLNSVVYTLRFAPHF---LHN 342
            .|            |...::.|      :..|.:| |.|:||:|||||::..|.:.|.|   :.:
Zfish    64 VP------------LPCPSSPLTCEKRESLVPFVG-LNNLGNTCYLNSILQVLYYCPGFKEAIKS 115

  Fly   343 LHHLIQDLNVVQQTIVRQQTARSASLGKNVSAAQLEHARSWSSKDLATSTDQYSGQNGGVNSGNG 407
            |.|:.:..:..|:..|..:    ...|:|.....:|...|:.|  |.:|.:|.
Zfish   116 LCHVAKLKDKPQEEGVNNE----GDSGENTLPVPMELLGSFHS--LISSVEQL------------ 162

  Fly   408 GSGSSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADTLLHAIQDVNATFEGNQQQDAHEFLMC 472
                     ||......|.||:   .|:|  |.|   ..||:|::.:|..:||..|.||.|.|.|
Zfish   163 ---------QSSFLLNPEKYND---GELA--TPP---RKLLNALRQLNPMYEGYLQHDAQEVLQC 210

  Fly   473 VLNCIRETNQSLIKAIGECPE-VIANGYIANPDEVDTGEGQDRTDSTAS----QNLNAGNGS--- 529
            :|..|:|...::.|...:..: .:.||    .:.|..|||.  :||..|    .:..|||..
Zfish   211 ILVNIQEACDTIKKEQTDNQDTTMING----TESVQDGEGS--SDSQLSGKRKSDTEAGNAKKKP 269

  Fly   530 LATSQTTTTKTSFFSRKSKRK--DEVKPSKSTRVQ-------------SPLKENSPTAGGITGAG 579
            .:.|::...:.:....:||||  .|:....|...|             ...|.:||...  ||..
Zfish   270 KSQSKSKKNEENVPMTRSKRKSSSEISTENSATEQRNGTEEQEKDSTTEEEKNDSPPKD--TGKR 332

  Fly   580 TAHATANSLFYLNTVDLSGASSTSGS---------ASTSASGVVSTSAALPTPPQATKYSSDDEM 635
            |....      |..:..||...:..|         :...|.|.....:...:..:..|.:|::|.
Zfish   333 TRRGK------LGWLRPSGKQPSIFSKFRSMGRITSHVGAKGETKEKSDCSSQEKQDKDNSENEN 391

  Fly   636 NSATVLKDKMRLEERIRELNLNFFSSDFEGIVVLTTKCLSCETITRQKQGMLDISVPV----PIS 696
            .:..|.:|..:.||   :..|:.....|:|.:||.|:||.||..|.:::...||||||    .:|
Zfish   392 KTHEVKQDLGKNEE---QSGLDVLKWMFQGQLVLRTRCLECECFTERREDFQDISVPVQEDETLS 453

  Fly   697 GYDNADLQDKPSTYIQ------NSCITKEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQL 755
            ...::::...|.|.::      :...:.|...|::||.|..|..||||.||:.::..|.::.|.|
Zfish   454 SDSSSEISPDPKTELKTLKWAISQFASVERIVGQDKYFCETCHHYTEAERSLLFDKTPEVITIHL 518

  Fly   756 NRFS---------GGMEKVSTYVPTTFTLPCFCATCCELGEGNKLHV---------YKLYSVITH 802
            ..|:         .|:.||:|.:.|...|              .||.         |:|::|:.|
Zfish   519 KCFAANGSEMDPYAGLSKVNTPLQTPLKL--------------SLHEWCTQPDSPDYELFAVVMH 569

  Fly   803 VGATLTVGHYIAYTCFLDLASDYVNC---------PKDRRNTMTNSQTMASQA-----------V 847
            .|.|::.|||..|...:||  .:.|.         .:|:...|...:...||.           .
Zfish   570 SGVTISSGHYTTYIRMMDL--HHTNIKPQTQDEEHDRDQEEDMKQKKEETSQTDYDDGEVSFSLS 632

  Fly   848 PSNENAAPNNGSSSVASTPVIAAASALASSGNILMKKMKFGRSKASSSGDMSKNVKQVN-----G 907
            ....|.|..:|:::::|    ..|....|.|..|:     |..::.:|.::| |.||.|     .
Zfish   633 GRGRNVARTSGTNNMSS----KTAGKRCSEGVGLL-----GGQRSITSYELS-NSKQNNPDKPSS 687

  Fly   908 IISKNITNGIGKLSISTTCQGVNCCAMRLCCTQQTSSSNSTSCSDFSEESLQNGSNSNLSFGGSG 972
            :.|:.:.....|......|                    :.:.:|.::.|......:.|.|.|.
Zfish   688 LSSRALLQNAVKKEPEEDC--------------------ADAVADGTQVSFDLALRNLLDFEGK- 731

  Fly   973 STYPTGYGSTGRGGVRANYAHGGPDPIWYMCDDDKIKAMTQREFEELLSPTRKITITPYLLFYAR 1037
                                       |.:.||.:::...:.:|....||....|.|||||||.|
Zfish   732 ---------------------------WMLFDDSEVRLYEEEDFLRACSPETCSTSTPYLLFYKR 769

  Fly  1038  1037
            Zfish   770  769

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_001263061.1	Peptidase_C19	308..819	CDD:271592	145/579 (25%)
usp1	NP_955873.1	Peptidase_C19O	61..768	CDD:239136	190/845 (22%)
		UCH	85..584	CDD:278850	143/565 (25%)
		Peptidase_C19	<560..622	CDD:271592	17/63 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1864
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	121	1.000	Inparanoid score	I4735
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D210538at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		oto41610
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X5721
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	7	6.960