Protein Alignment Usp1 and Usp46

DIOPT Version :9

• Sequence 1: NP_001263061.1
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: XP_006250950.1
• Gene: Usp46 / 289584
• RGDID: 1564808
• Length: 406
• Species: Rattus norvegicus
• Alignment Length: 588
• Identity: 101/588 - (17%)
• Similarity: 162/588 - (27%)
• Gaps: 278/588 - (47%)

  Fly   243 DRRFQTTTEERRVANGYGGNAARSVTGSSSNEIE---SQEPQSHQYYGPNGGSNAAGAGAGLNGS 304
            :|:....|.:..::..:.|:.|.|.|.:|:.|.:   .|.|.:..|:|
  Rat    29 NRQLSGLTWDPPLSATFSGHRAFSGTNASALEKDIGPEQFPINEHYFG----------------- 76

  Fly   305 AAALNHAPSMGTLCNIGNSCYLNSVVYTLRFAPHFLHNLHHLIQDLNVVQQTIVRQQTARSASLG 369
                        |.|.||:||.|||:..|.|...|..|:
  Rat    77 ------------LVNFGNTCYCNSVLQALYFCRPFRENV-------------------------- 103

  Fly   370 KNVSAAQLEHARSWSSKDLATSTDQYSGQNGGVNSGNGGSGSSKSTHQSVTEKLHELYNNLHGNE 434
                              ||....|...:|                   :...|.:|::::...:
  Rat   104 ------------------LAYKAQQKKKEN-------------------LLTCLADLFHSIATQK 131

  Fly   435 MADSTEPYHADTLLHAIQDVNATFEGNQQQDAHEFLMCVLNCIRETNQSLIKAIGECPEVIANGY 499
            ......|  ....:..::..|..|:...||||||||..:||.|.:..|...|
  Rat   132 KKVGVIP--PKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK------------- 181

  Fly   500 IANPDEVDTGEGQDRTDSTASQNLNAGNGSLATSQTTTTKTSFFSRKSKRKDEVKPSKSTRVQSP 564
                        |::.           ||.|                          |:..:..|
  Rat   182 ------------QEKQ-----------NGKL--------------------------KNGNMNEP 197

  Fly   565 LKENSPTAGGITGAGTAHATANSLFYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQATKY 629
            .:.:.|
  Rat   198 AENSKP----------------------------------------------------------- 203

  Fly   630 SSDDEMNSATVLKDKMRLEERIRELNLNFFSSDFEGIVVLTTKCLSCETITRQKQGMLDISVPVP 694
                                     .|.:....|:|.:...|:||:|||::.:.:..||:||.|.
  Rat   204 -------------------------ELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVE 243

  Fly   695 ISGYDNADLQDKPSTYIQNSCIT--------KEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLL 751
                             ||:.||        .|....|.||.|..|....||.:.:..:.||.:|
  Rat   244 -----------------QNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMIL 291

  Fly   752 VIQLNRFSGGMEKVSTYVPTTF------TLPCFCATCCELGEGNKLHVYKLYSVITHVGATLTVG 810
            .:.|.||. .||::..|...::      .|..|..:...:   |...:|.|.:|:.|.|:....|
  Rat   292 ALHLKRFK-YMEQLHRYTKLSYRVVFPLELRLFNTSSDAV---NLDRMYDLVAVVVHCGSGPNRG 352

  Fly   811 HYI 813
            |||
  Rat   353 HYI 355

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_001263061.1	Peptidase_C19	308..819	CDD:271592	89/520 (17%)
Usp46	XP_006250950.1	UCH	74..402	CDD:278850	91/543 (17%)
		Peptidase_C19G	76..403	CDD:239128	90/541 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1864
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900