DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp1 and Usp12

DIOPT Version :10

Sequence 1:NP_651687.3 Gene:Usp1 / 43462 FlyBaseID:FBgn0028476 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_035799.1 Gene:Usp12 / 22217 MGIID:1270128 Length:370 Species:Mus musculus


Alignment Length:562 Identity:99/562 - (17%)
Similarity:154/562 - (27%) Gaps:274/562 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 GSSSNEIE-----SQEPQSHQYYGPNGGSNAAGAGAGLNGSAAALNHAPSMGTLCNIGNSCYLNS 328
            |::::.:|     .|.|.:..|:|                             |.|.||:||.||
Mouse    17 GANASALEKEIGPEQFPVNEHYFG-----------------------------LVNFGNTCYCNS 52

  Fly   329 VVYTLRFAPHFLHNLHHLIQDLNVVQQTIVRQQTARSASLGKNVSAAQLEHARSWSSKDLATSTD 393
            |:..|.|                                            .|.:..|.||..:.
Mouse    53 VLQALYF--------------------------------------------CRPFREKVLAYKSQ 73

  Fly   394 QYSGQNGGVNSGNGGSGSSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADTLLHAIQDVNATF 458
            ....:|                   :...|.:|::::...:......|  ....:..::..|..|
Mouse    74 PRKKEN-------------------LLTCLADLFHSIATQKKKVGVIP--PKKFITRLRKENELF 117

  Fly   459 EGNQQQDAHEFLMCVLNCIRETNQSLIKAIGECPEVIANGYIANPDEVDTGEGQDRTDSTASQNL 523
            :...||||||||..:||.|.:..|                                         
Mouse   118 DNYMQQDAHEFLNYLLNTIADILQ----------------------------------------- 141

  Fly   524 NAGNGSLATSQTTTTKTSFFSRKSKRKDEVKPSKSTRVQSPLKENSPTAGGITGAGTAHATANSL 588
                                   .:||.|             |:|.....|              
Mouse   142 -----------------------EERKQE-------------KQNGRLRNG-------------- 156

  Fly   589 FYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQATKYSSDDEMNSATVLKDKMRLEERIRE 653
                .||....:||                  |.|..                         :.|
Mouse   157 ----DVDNEDNNST------------------PDPTW-------------------------VHE 174

  Fly   654 LNLNFFSSDFEGIVVLTTKCLSCETITRQKQGMLDISVPVPISGYDNADLQDKPSTYIQNSCIT- 717
            :        |:|.:...|:||:||||:.:.:..||:||.|.                 ||:.|| 
Mouse   175 I--------FQGTLTNETRCLTCETISSKDEDFLDLSVDVE-----------------QNTSITH 214

  Fly   718 -------KEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQLNRFSGGMEKVSTYVPTTF-- 773
                   .|....|.||.|.:|....||.:.:..:.||.:|.:.|.||. .|:::..|...::  
Mouse   215 CLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFK-YMDQLHRYTKLSYRV 278

  Fly   774 TLPCFCATCCELGEG-NKLHVYKLYSVITHVGATLTVGHYIA 814
            ..|.........|:. |...:|.|.:|:.|.|:....|||||
Mouse   279 VFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIA 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp1NP_651687.3 Peptidase_C19 308..819 CDD:470612 93/518 (18%)
Usp12NP_035799.1 Required for plasma membrane localization of USP12/WDR20. /evidence=ECO:0000250|UniProtKB:O75317 1..4
Peptidase_C19G 40..367 CDD:239128 94/539 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..168 8/70 (11%)
Blue background indicates that the domain is not in the aligned region.

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