Protein Alignment Usp1 and C04E6.5

DIOPT Version :10

• Sequence 1: NP_651687.3
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_504537.1
• Gene: C04E6.5 / 178977
• WormBaseID: WBGene00015422
• Length: 515
• Species: Caenorhabditis elegans
• Alignment Length: 702
• Identity: 136/702 - (19%)
• Similarity: 213/702 - (30%)
• Gaps: 267/702 - (38%)

  Fly   163 SEFWNRIEEAQEPKPVGKKRRTPGGLKRTRGNKLLKELEIQSPETAAAIAAAQAELNAAGKSGAA 227
            :|....|||.::|               ...||:...|||...|    :...|.|
 Worm    48 AELKEEIEELKKP---------------LEENKMAPLLEIVRSE----VFPEQLE---------- 83

  Fly   228 GARSSRKRTNTMSLYDRRFQTTTEERRVANGYGGNAARSVTGSSSNEIESQEPQSHQYYGPNGGS 292
              ..|:..|||.|            |:.|:.....|:.....||:...:..:.:.|.    |..:
 Worm    84 --HPSKNATNTGS------------RKRAHPKLFEASEPKVKSSNVSTDVIDGKKHN----NRKT 130

  Fly   293 NAAGAGAGLNGSAAALNHAPSMGTLCNIGNSCYLNSVVYTLRFAPHFLHNLHHLIQDLNVVQQTI 357
            |::.:.:.:|.|...        .|.|.||||:|||.:..|.....|......|        ..:
 Worm   131 NSSRSFSKVNSSVTR--------KLVNTGNSCFLNSTMQALSSCHSFALRCEQL--------YCL 179

  Fly   358 VRQQTARSASLGKNVSAAQLEHARSWSS-------------KDLATSTDQYSGQNGGVNSGNGGS 409
            ||          ||:.  ..::..|.|.             |.:|..|.:              |
 Worm   180 VR----------KNID--YFDNEASHSEVLCRKYRVLIDFLKIMAALTKR--------------S 218

  Fly   410 GSSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADTLLHAIQDVNATFEGNQQQDAHEFLMCVL 474
            .|||:..:.:...|                     .|....|..:...|....||||||||:
 Worm   219 NSSKTQPEIIEANL---------------------QTFRELIGMIRNDFANKNQQDAHEFLL--- 259

  Fly   475 NCIRETNQSLIKAIGECPEVIANGYIANPDEVDTGEGQDRTDSTASQNLNAGNGSLATSQTTTTK 539
                    .|.:||.:..|..|:           .||.|..::.....:.|...::.|.
 Worm   260 --------MLFEAIDDVAEYKAD-----------NEGDDVKEAKQLNPIEAFKFNVETC------ 299

  Fly   540 TSFFSRKSKRKDEVKPSKSTRVQSPLKENSPTAGGITGAGTAHATANSLFYLNTVDLSGASSTSG 604
               :..|...|:||:                                       ||:....:...
 Worm   300 ---YVCKGCSKEEVR---------------------------------------VDVRNDLAVHM 322

  Fly   605 SASTSASGVVSTSAALPTPPQATKYSSDDEMNSATVLKDKMRLEERIRE----LNLNFFSSDFEG 665
            ..:.|...::|:|.:..||.: .|.||.:..::.        |.|||..    |.:|......||
 Worm   323 RDNLSVQELLSSSFSTWTPIE-KKCSSCNHQHAI--------LSERITRFPECLVINLERYQLEG 378

  Fly   666 IVVLTTKCLSCETITRQKQGMLDISVPVPISGYDNADLQDKPSTYIQNSCITKEYFRGENKYSCN 730
             ...:||.::|.         |:.|..:.||     .||..|.  |:.:.:.:...:.:::|.
 Worm   379 -PQFSTKKINCS---------LEPSFELDIS-----SLQKFPE--IEKNGLEQSEKQQDSQYG-- 424

  Fly   731 QCTGYTEAIRSISYEVLPRLLVIQLNRFSGGMEKVSTYVPTTFTLPCFCATCCELGE---GNKLH 792
                          ::|.|:                        ..|....|||...   ..|..
 Worm   425 --------------QLLDRM------------------------KSCEIIKCCETKNIIMEEKHD 451

  Fly   793 VYKLYSVITHVGATLTVGHYIAYTCFLDLASDYVNCPKDRRNTMTNSQTMAS 844
            .|.|.:.|.|:|.|.|.||||||| ..|..:.::.|..|.....|.|:...|
 Worm   452 KYSLVAAICHLGETPTNGHYIAYT-REDTENSWLYCSDDLIRPATRSEISLS 502

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_651687.3	Peptidase_C19	308..819	CDD:470612	102/530 (19%)
C04E6.5	NP_504537.1	Peptidase_C19Q	146..513	CDD:239138	108/549 (20%)