DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp1 and Usp1

DIOPT Version :10

Sequence 1:NP_651687.3 Gene:Usp1 / 43462 FlyBaseID:FBgn0028476 Length:1078 Species:Drosophila melanogaster
Sequence 2:XP_061507059.1 Gene:Usp1 / 1277401 VectorBaseID:AGAMI1_010648 Length:993 Species:Anopheles gambiae


Alignment Length:1057 Identity:329/1057 - (31%)
Similarity:464/1057 - (43%) Gaps:331/1057 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 GNAARSVTGSSSNEIESQEPQSHQYYGPNGGSNAAGAGAGLNGSAAALNH------APSMGTLCN 319
            |:||.:...:.:|..|....|.|     :..::|....|.|..:..:||.      :.|:.||||
Mosquito    13 GSAATATIVNGTNAYELFCEQHH-----HKCNSAIATAAALQTAMKSLNSMVTHTMSNSLATLCN 72

  Fly   320 IGNSCYLNSVVYTLRFAPHFLHNLHHLIQDLNVV----------------------QQTIVRQQT 362
            ||||||:|||:|||||||:|.||||||::.|.:.                      :|:.:..: 
Mosquito    73 IGNSCYMNSVLYTLRFAPNFTHNLHHLVEFLELTLHKANAEKRCLPEHDEQGHGQDEQSAINSK- 136

  Fly   363 ARSASLGKNVSAAQLEHARSWSSKDL--------------------------------------- 388
            .:.:.||............||:.|:|                                       
Mosquito   137 QKGSLLGAGSDGPDALGGHSWNGKELGLHEKHVNGYETHAAPYGRSSSASDGSAMVSEICFSESE 201

  Fly   389 ----------------ATSTDQYSGQN--------GGVNSGNGGSGSSKSTHQSVTEKLHELYNN 429
                            ..||..|:|.:        ..|::|||    :|:..|.|.|.|||||::
Mosquito   202 KCSAPANHARGCNAYGGASTPAYTGDSYNRSRKCEPSVSNGNG----AKTNRQLVCETLHELYHS 262

  Fly   430 LHGNEMADSTEPYHADTLLHAIQDVNATFEGNQQQDAHEFLMCVLNCIRETNQSLIKAIGECPEV 494
            |..||.||:.||:||..||.|:|.|::||||||||||||||||:|:.:||:...|.|.:.|.|:.
Mosquito   263 LARNEAADTIEPFHAGGLLQAVQRVSSTFEGNQQQDAHEFLMCILDSVRESCLKLNKTLIENPDF 327

  Fly   495 IANGYIANPDEVDTGEGQ-DRTDSTASQNLNAGNGSLATSQTTTTKTSFFSRK--SKRKDEVKPS 556
            :....:.:.::....:|. |..|            |:..|..|.:.|.|..|.  .:||:.::.:
Mosquito   328 LKISSLPSLEKPAPAKGTFDSAD------------SVTASTETKSSTQFIGRNIFRRRKESLRNA 380

  Fly   557 KSTRVQSPLKENSPTAGGITGAGTAHATANSLFYLNTVDLSGASSTSGSASTSA---SGVVSTSA 618
            ||...    ||:...|                    .|:|..|||....|..|.   :|.....|
Mosquito   381 KSFAA----KESKANA--------------------AVELPLASSVKPMAPVSKCADAGAGKDKA 421

  Fly   619 ALPTPPQATKYSSDDEMNSATVLKDKMRLEERIRELNLNFFSSDFEGIVVLTTKCLSCETITRQK 683
            :||       :.:....:.||..::  |||||||.|.||||..||||:.|..|:||||||:|.||
Mosquito   422 SLP-------HETTTGGHGATAAEE--RLEERIRTLGLNFFCEDFEGVTVSRTRCLSCETVTEQK 477

  Fly   684 QGMLDISVPVPISGYDNADLQDKPSTYIQNSCITKEYFRGENKYSCNQCTGYTEAIRSISYEVLP 748
            :.|:||::|:..|  :.::....|..:.|::|||:|||||:|||.|..|:|||||.|:||:::||
Mosquito   478 EIMIDIAIPITSS--EISEALKNPQQFYQDACITQEYFRGDNKYRCEVCSGYTEACRTISFDILP 540

  Fly   749 RLLVIQLNRFSGGMEKVSTYVPTTFTLPCFCATCCELGEGNKLHVYKLYSVITHVGATLTVGHYI 813
            ||||:||.||:|.|||:::|:||.|.|.||||.|....:..|.|||:||||||||||.::|||||
Mosquito   541 RLLVLQLKRFNGDMEKINSYIPTPFVLQCFCADCLGKSDSEKRHVYRLYSVITHVGARMSVGHYI 605

  Fly   814 AYTCFLDLASDYVNCPKDR-RNTMTNSQTMASQAVPSNENAAPNNGSSSVASTPVIAAASALASS 877
            |||..|.:...||||.||| |..:..:.::.:||      |..:||...|       ..|.....
Mosquito   606 AYTSSLQIPLHYVNCVKDRQRRALLAASSLEAQA------AGVSNGIKGV-------GISGKGHG 657

  Fly   878 GNI------LMKKMKFGRSKASSSGDMSKNVKQVNGIISK-NITNGIGKLSI---STT------- 925
            |.:      .:||: ||..||||:||:||.:|  |.:|:: :..|||..|.:   :||       
Mosquito   658 GGVDKSASGQLKKL-FGSKKASSAGDISKKLK--NNVINRFSPINGIENLQLNAHATTVCIEKAV 719

  Fly   926 ---------------------------------------------------------CQGVNCCA 933
                                                                     ||.|.|||
Mosquito   720 RAGYSDNFYSIQSMDGVSSARSAVDCSLGGGSNPCDGKTNHPLRSICDKASNLHDLHCQSVGCCA 784

  Fly   934 M-----------------------------------------------------RLC---CTQQ- 941
            :                                                     .:|   |.|. 
Mosquito   785 VLAKNILADDIRHAGCAHAGSGTADEGGGLIGDGLRSSSGPGSAPHHLSPIVAGSMCEMNCAQSR 849

  Fly   942 ------TSSSNST--SC--SDFSEESLQNGSNSNLSFGGSGSTYPTGYGSTGRGGVRANYAHGGP 996
                  ...|.||  :|  |..|..|:.|..||.||:|..            .....|.......
Mosquito   850 YKLDGANGESQSTIGNCHSSLLSSSSINNQGNSELSYGNF------------MDDTVARQQQQQQ 902

  Fly   997 DPIWYMCDDDKIKAMTQREFEELLSPTRKITITPYLLFYARFDLQPQKATPPMPGSSTTPPPPSS 1061
            ...||||||||:|.|||.||||:|||.|:...|||||||||:|::.::...|...|::  |....
Mosquito   903 QLTWYMCDDDKVKIMTQLEFEEILSPNRRHVTTPYLLFYARYDIERKEHNQPKEQSAS--PTQQH 965

  Fly  1062 AQSSWSNENVSSGSHKI 1078
            .|..:.::     .||:
Mosquito   966 QQQQYQHK-----MHKV 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp1NP_651687.3 Peptidase_C19 308..819 CDD:470612 222/607 (37%)
Usp1XP_061507059.1 None

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