DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Brd8 and RSC4

DIOPT Version :10

Sequence 1:NP_651685.2 Gene:Brd8 / 43460 FlyBaseID:FBgn0039654 Length:872 Species:Drosophila melanogaster
Sequence 2:NP_012933.4 Gene:RSC4 / 853877 SGDID:S000001716 Length:625 Species:Saccharomyces cerevisiae


Alignment Length:276 Identity:47/276 - (17%)
Similarity:101/276 - (36%) Gaps:74/276 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 GSGNQEQGVDEATSSAAGTADSDEADPNEAQLLEVFKNIDQIIDDIDIDM-----------ASVI 404
            |.|    |...|.:.|....|:|         :|...|.:.:||..|.|.           .|::
Yeast   322 GGG----GPAAAGALAISALDND---------IEPESNREDLIDQADYDFNHFEGLGNGYNRSLL 373

  Fly   405 DDEILKNVDD---VVASP-------SNDKAEVIDFE------------DKLDALKREQSKSSPAS 447
            .::.|.|.::   ::|.|       .|:::...|.|            .|.:.:|..|.:....|
Yeast   374 TEDYLLNPNNFKKLIAKPETVQSEVKNERSTTSDIEKTNSLESEHLKIPKYNVIKSMQKEMQSLS 438

  Fly   448 D------KPKSV--ELVIGSSDDSNDNIPLAAVASQESKDRGQ-----SGGESTRGTEDAES--- 496
            :      ||..:  ::.|.||.:.........:.|:.|.::..     :|.|.:: .|:|.|   
Yeast   439 EQHTMEYKPYKLIQQIYIFSSKNLYSQATKPLLGSRPSCNQNWVEYIFNGNELSQ-NENAFSFML 502

  Fly   497 EPLTSEVAVE-----EIGETITIISTSSEDTAGSPPTKMEEDGATDSLPKKEDAAEDKSEQESSS 556
            :|:.:.:.::     .:.:|.|:::.:.|      |.|........:|.:.:....|....::..
Yeast   503 QPMQTFLTLQSHLTSSLKDTETLLTINKE------PVKSRTSNVNSNLSQPQQQENDVIGNDTKQ 561

  Fly   557 QGQNKAGGSTDEPELI 572
            ..:|...|..:..:::
Yeast   562 DIENLTIGGGNNNDIV 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brd8NP_651685.2 PTZ00108 <111..367 CDD:240271 4/15 (27%)
PHA03307 403..>708 CDD:223039 33/213 (15%)
Bromo_brd8_like 729..833 CDD:99939
RSC4NP_012933.4 COG5076 40..423 CDD:227408 21/113 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.