DRSC/TRiP Functional Genomics Resources

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Protein Alignment Brd8 and BDF2

DIOPT Version :9

Sequence 1:NP_651685.2 Gene:Brd8 / 43460 FlyBaseID:FBgn0039654 Length:872 Species:Drosophila melanogaster
Sequence 2:NP_010213.1 Gene:BDF2 / 851488 SGDID:S000002228 Length:638 Species:Saccharomyces cerevisiae


Alignment Length:434 Identity:91/434 - (20%)
Similarity:159/434 - (36%) Gaps:86/434 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 ALKREQSKSSPASDKPKSVELVIGSSDDSNDNIPLAAVASQES---KDRGQSGGESTRGTEDAES 496
            |..|..:.||.:|....::.  :|..|||.:   ::||:..:.   :|....|.|.......:..
Yeast    24 ANSRSSNSSSESSSNKNNIN--VGVGDDSGN---VSAVSIDDGPHFRDIFHYGHEENYKLASSGI 83

  Fly   497 EPLTSEVAVEEIGETITIISTSSEDTAGSPPTKMEEDGATDSLPKKEDAAEDKSEQESSSQGQNK 561
            ..|.|.....:....|:|.:.|:.::....|..:|.:        .|.|.|.:.|.|        
Yeast    84 TNLNSSSHAHQTLSPISISNASTPESFPEHPLGLERE--------TEPALEAEMEAE-------- 132

  Fly   562 AGGSTDEPELIDHQATREAQS----KSGKDTAG-----KPVTMQEKTTTQSAPVPVDL------- 610
                    ||..||:.....|    |..||...     .|:.:...........|:||       
Yeast   133 --------ELPPHQSKYLLSSIKATKRLKDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL 189

  Fly   611 -----HDTDEESS---SLTDSSKHDDHPRSAKAKPPALKLALDDSK-SELELSGTPQ---PPSAP 663
                 |..::.:|   ::.|:..:.:.|.|:.:     .:|....| .|.:||..|.   |.||.
Yeast   190 QGNVYHSVEQVTSDFKTMVDNCLNFNGPESSIS-----SMAKRIQKYFEKKLSAMPPRVLPASAL 249

  Fly   664 ARTPLLRKLPHRDRSESPMVDDDATTASDHSTARSTRRRCSSTPVIDSIPNSPASSEHTDDRRET 728
            .:|...||  ..:..:||:|...:.:.::.:...|..|...|........:.|.|.:..|....:
Yeast   250 KKTSRNRK--KNEDMDSPLVIRRSVSTTNDNIGESGNREGVSGGRPKRTIHPPKSKDLFDIYENS 312

  Fly   729 RAASKKL------FLSIYAMLLDSKHA---APFKRPFHDEHA---QRHADLCLRPMDFPTIKRNI 781
            :..||.|      .|.|..:|:..|::   .||.:|. |..|   ..:.|:...|||..||..|:
Yeast   313 KPKSKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPV-DPIALNLPNYFDVVKNPMDLGTISNNL 376

  Fly   782 DSGFIRSLSELHRDVLLMAHNVLVAYKP-----HTAQHKTARLF 820
            .:...:::.:...|:.|:.:|.. .:.|     |:...|...||
Yeast   377 MNWKYKTIDQFVDDLNLVFYNCF-QFNPEGNEVHSMGKKLKELF 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brd8NP_651685.2 PaaSYMP <105..188 CDD:291408
PHA03249 402..>582 CDD:223023 30/149 (20%)
Bromo_brd8_like 729..833 CDD:99939 27/109 (25%)
BDF2NP_010213.1 COG5076 55..378 CDD:227408 74/354 (21%)
Bromodomain <344..419 CDD:413371 18/76 (24%)
Lebercilin <472..>537 CDD:406132
BET 521..576 CDD:407211
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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