DRSC/TRiP Functional Genomics Resources

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Protein Alignment Brd8 and PBRM1

DIOPT Version :9

Sequence 1:NP_651685.2 Gene:Brd8 / 43460 FlyBaseID:FBgn0039654 Length:872 Species:Drosophila melanogaster
Sequence 2:XP_016862214.1 Gene:PBRM1 / 55193 HGNCID:30064 Length:1734 Species:Homo sapiens


Alignment Length:607 Identity:118/607 - (19%)
Similarity:201/607 - (33%) Gaps:178/607 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 TPTLERSPSQAAPTLSMLLEKNMAAAKANESGSLVK------------PEGSGNQEQGVDEATSS 365
            :|..:.||:.....|..|||..:.|  .|.||.|:.            |:.....::.:|..|.:
Human   202 SPHYQSSPAYLKEILEQLLEAIVVA--TNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIA 264

  Fly   366 AA---GTADSDEADPNEAQLL------------EVFKNIDQIIDDIDIDMASVIDDEILKN---- 411
            ..   |:..|..|...:..||            :|||:.:.|.....:..|.:...|:.|:    
Human   265 QRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRM 329

  Fly   412 --VDDVVAS----PSNDKAEVIDFEDKLDALKREQSKSSPASDKPKSVELVIGSSDDSNDNIPLA 470
              ..::.|:    ||:.|..:  .|::....|..::|.:....:..::.:.:....:|.::..||
Human   330 RTPSNLAAARLTGPSHSKGSL--GEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALA 392

  Fly   471 AVASQESKDRGQSGGESTRGTEDAESEPLTSEVAVE----EIGETITIISTSSEDTAGSP----P 527
            |...:|        |||       |:|.:||.:.|.    ::.:|:.....:.......|    |
Human   393 AARYEE--------GES-------EAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLP 442

  Fly   528 TKMEEDGATDSLPKKEDAAEDKSEQESSSQGQNKAGGSTDEPELIDHQATREAQSKSGKDTAGKP 592
            :|          .|..|..:......|..|.:.|.  ...|.|.:||                  
Human   443 SK----------KKYPDYYQQIKMPISLQQIRTKL--KNQEYETLDH------------------ 477

  Fly   593 VTMQEKTTTQSAPVPVDLHDTDEESSSLTDSSKHDDHPRSAKAKPPALKL--ALDDSKSELELSG 655
                         :..||       :.:.:::|..:.|.||..| ..|||  .:...|.||    
Human   478 -------------LECDL-------NLMFENAKRYNVPNSAIYK-RVLKLQQVMQAKKKEL---- 517

  Fly   656 TPQPPSAPARTPLLRKLPHRDRSESPMVDDDATTASDHSTARSTRRRCSSTPVIDSIPNSPASSE 720
                    ||         ||..|    |.|:..:|..|...|.:|:.::.   ||   ......
Human   518 --------AR---------RDDIE----DGDSMISSATSDTGSAKRKRNTH---DS---EMLGLR 555

  Fly   721 HTDDRRETRAASKKLFLSIY---------AMLLDSKHAAPFKRPFHDEHAQRHADLCLRPMDFPT 776
            ....::..|....|:..::.         ..|.|.....|.|:.:.|     :..:.|.|||...
Human   556 RLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPD-----YYKIILEPMDLKI 615

  Fly   777 IKRNIDSGFIRSLSELHRDVLLMAHNVLVAYKPHTAQ-----HKTARLFVQDCQAIKEFSQLPDV 836
            |:.||.:........:..|:.||..|.. .|....:|     |...:|..   :..||...|||.
Human   616 IEHNIRNDKYAGEEGMIEDMKLMFRNAR-HYNEEGSQVYNDAHILEKLLK---EKRKELGPLPDD 676

  Fly   837 QAGITATPVSNTGSLRADKSSG 858
            ..  .|:|     .|:..:.||
Human   677 DD--MASP-----KLKLSRKSG 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brd8NP_651685.2 PaaSYMP <105..188 CDD:291408
PHA03249 402..>582 CDD:223023 35/197 (18%)
Bromo_brd8_like 729..833 CDD:99939 24/117 (21%)
PBRM1XP_016862214.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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