DRSC/TRiP Functional Genomics Resources

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Protein Alignment Brd8 and brd8b

DIOPT Version :9

Sequence 1:NP_651685.2 Gene:Brd8 / 43460 FlyBaseID:FBgn0039654 Length:872 Species:Drosophila melanogaster
Sequence 2:XP_017214481.1 Gene:brd8b / 337414 ZFINID:ZDB-GENE-030722-10 Length:864 Species:Danio rerio


Alignment Length:942 Identity:247/942 - (26%)
Similarity:399/942 - (42%) Gaps:224/942 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAGVQERLQLSRMPLDTWSKREQLILASAVSCSGDQNWITVSRTLKTICGNGSSNRPADWFSQK 65
            ||.|:.:...||..|.:.||.||:|.|||:|..||||||::|||.:|..   ..|.||.||||||
Zfish     1 MSTGMGKHKMLSLGPTEPWSIREKLCLASSVMRSGDQNWVSVSRAIKPF---SESGRPPDWFSQK 62

  Fly    66 NCAMQYGNLLESVEATKRKKRSSESSAGVSSPATVETPTELLLRRLTEERQAEIKAQMRQDQETY 130
            :||.||..|||:.||.|||:.....        .|||..::::||||.||..|:|..::..||.|
Zfish    63 HCASQYSQLLETTEAPKRKRGEKGE--------VVETIEDVIVRRLTAERIEELKRLIKDTQEKY 119

  Fly   131 RRIQREIESLQSDAVTEQELQDMWLEIE--KEQEARRIEEMKLENRMREREQRKKDLASNW--RN 191
            |::::|::.:|:..| :.:|:::|.|||  |:||....|:.|   |..|...:.:..|.|.  |.
Zfish   120 RKLKKEVDLIQAGHV-DPKLEELWAEIELKKKQEEEEAEQKK---RATEAAYQIRQAAKNTPKRV 180

  Fly   192 SSLAVKRSNQAADTTSVD--------------------------MDVEDINTSGNGKQQTGPSPL 230
            .|:.| ||...|.:.|:|                          |.|.|:  .|.|.:::|.|.|
Zfish   181 PSVTV-RSPPGASSPSMDILQPDASQPMTDESCASPMAQGVTVFMPVSDV--MGPGPKESGLSSL 242

  Fly   231 LTSLLKSPTGN--AP-ATPTPGGAAPAAGGTGSVARATAPTITSLLTSGPSSAVANQPVITMKSP 292
            :..   ||...  || |||.|                 :|.::.||..|...|.:::.|:..:..
Zfish   243 VDD---SPQKKHLAPKATPPP-----------------SPLLSELLKKGSLIAASSRLVVEGEVA 287

  Fly   293 TDAAFMSRPITGPPASEASTTPTL---ERSPSQAAPTLSMLLEKNMAAAK--------------- 339
            |..:      .|..|.|..|:.|:   .:..:..|||||.|||....|.:               
Zfish   288 TGLS------NGSHAVELHTSATVLPATQDITADAPTLSRLLESVTPAQQPVSADPPKPPTVVPP 346

  Fly   340 ------ANESGSLVKPEGSGNQEQGVDEATSSAAGTADSDEADPNEAQLLEVFKNIDQIIDDIDI 398
                  ..:||.....||||        |.:..||::...|.:..|.:|:|         :|..:
Zfish   347 APDHLSVPKSGDAAIAEGSG--------AEAVMAGSSTPAEVEGKETELVE---------EDTVV 394

  Fly   399 DMASVIDDEILKNVDDVVASPSNDKAEVIDFEDKLDALKREQSKS---SPASDKPKSVELVIG-- 458
            .::.:..:..|:.|.|::|.   .:.:|.|..:.|||...|.:.|   .||          :|  
Zfish   395 SVSYMGHELDLETVGDIIAI---IEEKVDDPVEALDAAAVEAALSLCEDPA----------VGGH 446

  Fly   459 --SSDDSNDNIPLAAVASQESKDRGQSGGESTRGTEDAESEPLTSEVAVEEIGETITIISTSSE- 520
              :|...:.....|.......:....:|.||...:...:.|   .||.|||..||..:...:.| 
Zfish   447 PLTSPWESQTFKAAEPEPMIQQSAIPAGAESAPNSAIVQGE---MEVLVEEATETEAVEGVTEEP 508

  Fly   521 DTAGSPPTKMEEDGATDSLPKKEDAAEDKSEQESSSQGQNKAGGSTDEPELIDHQATREAQSKSG 585
            :...:|.|:..:|            :|.|:|.|...:|:    |..:|....:::....|....|
Zfish   509 EVPSAPETEQSQD------------SEVKTEVERGGEGE----GGVEETAQPENRTPSPAVKCEG 557

  Fly   586 KDTAGKPVTMQEKTTTQSAPVPVDLHDTDEESSSLTDSSKHDDHPRSAKAKPPALKLALDDSKSE 650
            :|      .:|.:|.|...       |:::.|:|..|:       :..|.:....::.:|:. .|
Zfish   558 ED------WVQPETVTPCL-------DSEDSSASAKDA-------KEVKEEDGGSEVDVDEG-ME 601

  Fly   651 LELSGTPQPPSAPARTPLLRKLPHRDRSESPMVDDDATTASDHSTARSTRRRCSSTPVIDSIPNS 715
            ::..|     ......|.|.:           ||..|:.:.|...:.|.|...:     ||..:|
Zfish   602 MKECG-----DGDGEGPYLSE-----------VDPPASESEDGYGSHSQRYTTA-----DSTASS 645

  Fly   716 PASSEH---TDDRRETRAAS--KKLFLSIYAMLLDSKHAAPFKRPFHDEHAQRHADLCLRPMDFP 775
            ||||:.   ::|:...:|..  ||..:.::....:.::|:.|.:|..|:.|..:..:..||||..
Zfish   646 PASSQFSMCSEDQEALQAQKIWKKAIMLVWRAAANHRYASVFLQPVSDDIAPGYHSIVHRPMDLS 710

  Fly   776 TIKRNIDSGFIRSLSELHRDVLLMAHN-VLVAYKPHTAQHKTARLFVQDCQAIKEF--SQL--PD 835
            .||:||:||.||:.:|..||::||..| |:.....|...|....:.....:.|::|  :||  ..
Zfish   711 AIKKNIESGQIRTTAEFQRDIMLMFQNAVMYNSSDHDVYHMALEMQRDVLEQIQQFLATQLIMQT 775

  Fly   836 VQAGITATPVSNTGSLRADKSSGSKARSGSRK 867
            .::||      :|.|||        .|..:||
Zfish   776 SESGI------STKSLR--------GREANRK 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brd8NP_651685.2 PaaSYMP <105..188 CDD:291408 28/84 (33%)
PHA03249 402..>582 CDD:223023 39/187 (21%)
Bromo_brd8_like 729..833 CDD:99939 31/108 (29%)
brd8bXP_017214481.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595295
Domainoid 1 1.000 151 1.000 Domainoid score I4318
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 195 1.000 Inparanoid score I3810
OMA 1 1.010 - - QHG46231
OrthoDB 1 1.010 - - D1509761at2759
OrthoFinder 1 1.000 - - FOG0004061
OrthoInspector 1 1.000 - - otm24393
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15398
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5075
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.960

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