DRSC/TRiP Functional Genomics Resources

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Protein Alignment Brd8 and brd2a

DIOPT Version :9

Sequence 1:NP_651685.2 Gene:Brd8 / 43460 FlyBaseID:FBgn0039654 Length:872 Species:Drosophila melanogaster
Sequence 2:NP_571275.2 Gene:brd2a / 30445 ZFINID:ZDB-GENE-990415-248 Length:836 Species:Danio rerio


Alignment Length:362 Identity:85/362 - (23%)
Similarity:124/362 - (34%) Gaps:81/362 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 PELIDHQATREAQSKSGKDTAGKPVTMQEKTTTQSAPVPVDLHDTDEESSSLTDSSKHDDHPRSA 633
            ||:.:.......:.|..|...|:.:.....||....|....|       |.|..|....|.|.|.
Zfish   179 PEVEEEIPAPVPRGKQSKPKKGQKLFSGGITTAHQVPAISSL-------SQLAYSPPTPDTPDSV 236

  Fly   634 KAKPPALKLALDDSKSELELSGTPQ----PPSAP------------ARTPLLRKLP--------- 673
            .:.||  :..:..:.....|..||.    ||:.|            ..||....:|         
Zfish   237 LSTPP--QTLITKNFPPPPLHSTPALLGLPPTQPTAKKKGVKRKADTTTPTTTVMPLTLGVGGMG 299

  Fly   674 --------------HRDRSESPMVDDDATTASDHSTARS----------TRRRCSSTPVIDSIPN 714
                          .....:||:...:....|..|.:.|          .||..|..|:.....:
Zfish   300 MGMGMGMSMGMGMGMGLGGDSPLTLSNMGMDSKQSLSLSLGMSLEDKVPARRGGSGRPIKPPRKD 364

  Fly   715 SPAS-SEHTDDRRETRAASKKLFLSIYAMLLDSKHAA---PFKRP-------FHDEHAQRHADLC 768
            .|.| ::|...||...:...:...:|...||..||.|   ||.:|       .||     :.|:.
Zfish   365 LPDSQNQHQPVRRGKLSQQLRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHD-----YYDII 424

  Fly   769 LRPMDFPTIKRNIDSGFIRSLSELHRDVLLMAHNVLVAYKPHTAQHKTARLF--VQDCQAIKEFS 831
            :.|||..||||.:|....|...:...||.||..|   .||.:...|....:.  :||....: |:
Zfish   425 MYPMDLSTIKRKMDHREYRDALQFAADVRLMFSN---CYKYNPPDHDVVAMARRLQDVFEFR-FA 485

  Fly   832 QLPDVQAGITATPVSNTGSLRADKSSGSKARSGSRKS 868
            ::|| :...:..|.|..|.|..|.||.|.:.|.|.:|
Zfish   486 KMPD-EPLESLPPASLGGGLGGDSSSSSSSSSSSSES 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brd8NP_651685.2 PaaSYMP <105..188 CDD:291408
PHA03249 402..>582 CDD:223023 2/12 (17%)
Bromo_brd8_like 729..833 CDD:99939 32/115 (28%)
brd2aNP_571275.2 Bromo_Brdt_I_like 72..178 CDD:99929
Bromo_Brdt_II_like 383..484 CDD:99930 31/109 (28%)
BET 676..738 CDD:293640
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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