DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyt-c1L and AT3G27240

DIOPT Version :9

Sequence 1:NP_651683.1 Gene:Cyt-c1L / 43457 FlyBaseID:FBgn0039651 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_189360.1 Gene:AT3G27240 / 822343 AraportID:AT3G27240 Length:307 Species:Arabidopsis thaliana


Alignment Length:270 Identity:145/270 - (53%)
Similarity:190/270 - (70%) Gaps:6/270 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SGFTGNRKLLGALGALTGTAGLLIYALETSVDASSDCVHPAHQHWNHKGLLSALDKESVRRGYTV 100
            :|.:|.| .|..|||  |..|||.::...|.|.:...:......|.|.|:||:.|..|:|||:.|
plant    37 AGSSGVR-ALALLGA--GVTGLLSFSTVASADEAEHGLESPEYPWPHDGILSSYDHASIRRGHQV 98

  Fly   101 YKEVCSSCHSLQYMAYRNLVGVCMTEAEAKAEAEAITVRDGPNEEGEYYERPGKLSDHFPSPYAN 165
            |::||:||||:..::||:||||..||.||||.|..|.|.||||:|||.:.|||||||.||.||||
plant    99 YQQVCASCHSMSLISYRDLVGVAYTEEEAKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYAN 163

  Fly   166 EEAARSANNGSYPPDLSYIVSARKGGEDYVFSLLTGYCDPPAGFALRDGLYFNPYFSGGAIAMGK 230
            |.|||.||.|:||||||.|..||..|.:|||:|||||.|||||.::|:||::||||.||||||.|
plant   164 ESAARFANGGAYPPDLSLITKARHNGPNYVFALLTGYRDPPAGISIREGLHYNPYFPGGAIAMPK 228

  Fly   231 VVDNEVVSFEDPNVPASAAQIAKDVCVFLKWTSEPETDERRLLLIK-VTLISTFLIGISYYIKRF 294
            ::::|.|.:|| .|||:.||:.||:..||.|.:|||.:||:|:..| :.|:|..|:..:|| :|.
plant   229 MLNDEAVEYED-GVPATEAQMGKDIVSFLAWAAEPEMEERKLMGFKWIFLLSLALLQAAYY-RRL 291

  Fly   295 KWSTLKSRKI 304
            |||.|||||:
plant   292 KWSVLKSRKL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1LNP_651683.1 CYT1 73..300 CDD:225413 127/227 (56%)
Cytochrom_C1 80..299 CDD:280350 127/219 (58%)
AT3G27240NP_189360.1 Cytochrom_C1 78..294 CDD:396646 125/217 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 272 1.000 Domainoid score I433
eggNOG 1 0.900 - - E1_COG2857
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 290 1.000 Inparanoid score I832
OMA 1 1.010 - - QHG54185
OrthoDB 1 1.010 - - D923710at2759
OrthoFinder 1 1.000 - - FOG0003553
OrthoInspector 1 1.000 - - mtm1168
orthoMCL 1 0.900 - - OOG6_102032
Panther 1 1.100 - - O PTHR10266
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2430
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.