DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-c1L and Cyc1

DIOPT Version :10

Sequence 1:NP_651683.1 Gene:Cyt-c1L / 43457 FlyBaseID:FBgn0039651 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_079843.1 Gene:Cyc1 / 66445 MGIID:1913695 Length:325 Species:Mus musculus


Alignment Length:322 Identity:168/322 - (52%)
Similarity:218/322 - (67%) Gaps:31/322 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AMSGIQRTSVRPR-ISFPGRG--------------------------SGFTGNRK-LLGALGAL- 51
            |.:.::||.:.|| :..||..                          ||.:..|| :|.|||.| 
Mouse     4 AAASLRRTVLGPRGVGLPGASAPGLLGGARSRQLPLRTPQAVSLSSKSGPSRGRKVMLSALGMLA 68

  Fly    52 TGTAGLLIYALETSVDASSDCVHPAHQHWNHKGLLSALDKESVRRGYTVYKEVCSSCHSLQYMAY 116
            .|.|||.: ||.::|.||...:||....|:|:||||:||..|:|||:.|||:|||||||:.|:||
Mouse    69 AGGAGLAV-ALHSAVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAY 132

  Fly   117 RNLVGVCMTEAEAKAEAEAITVRDGPNEEGEYYERPGKLSDHFPSPYANEEAARSANNGSYPPDL 181
            |:|||||.||.||||.||.:.|:||||::||.:.|||||||:||.||.|.||||:||||:.||||
Mouse   133 RHLVGVCYTEEEAKALAEEVEVQDGPNDDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDL 197

  Fly   182 SYIVSARKGGEDYVFSLLTGYCDPPAGFALRDGLYFNPYFSGGAIAMGKVVDNEVVSFEDPNVPA 246
            ||||.||.||||||||||||||:||.|.:||:||||||||.|.||.|...:..||:.::| ..||
Mouse   198 SYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQAIGMAPPIYTEVLEYDD-GTPA 261

  Fly   247 SAAQIAKDVCVFLKWTSEPETDERRLLLIKVTLISTFLIGISYYIKRFKWSTLKSRKIFFIP 308
            :.:|:||||..||:|.||||.|.|:.:.:|:.|:...|:.::|.:||.|||.|||||:.:.|
Mouse   262 TMSQVAKDVATFLRWASEPEHDHRKRMGLKMLLMMGLLLPLTYAMKRHKWSVLKSRKLAYRP 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1LNP_651683.1 Cytochrom_C1 80..299 CDD:426633 135/218 (62%)
Cyc1NP_079843.1 Cytochrom_C1 96..312 CDD:426633 133/216 (62%)

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