DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-c1L and Cyc1

DIOPT Version :9

Sequence 1:NP_651683.1 Gene:Cyt-c1L / 43457 FlyBaseID:FBgn0039651 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_079843.1 Gene:Cyc1 / 66445 MGIID:1913695 Length:325 Species:Mus musculus


Alignment Length:322 Identity:168/322 - (52%)
Similarity:218/322 - (67%) Gaps:31/322 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AMSGIQRTSVRPR-ISFPGRG--------------------------SGFTGNRK-LLGALGAL- 51
            |.:.::||.:.|| :..||..                          ||.:..|| :|.|||.| 
Mouse     4 AAASLRRTVLGPRGVGLPGASAPGLLGGARSRQLPLRTPQAVSLSSKSGPSRGRKVMLSALGMLA 68

  Fly    52 TGTAGLLIYALETSVDASSDCVHPAHQHWNHKGLLSALDKESVRRGYTVYKEVCSSCHSLQYMAY 116
            .|.|||.: ||.::|.||...:||....|:|:||||:||..|:|||:.|||:|||||||:.|:||
Mouse    69 AGGAGLAV-ALHSAVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAY 132

  Fly   117 RNLVGVCMTEAEAKAEAEAITVRDGPNEEGEYYERPGKLSDHFPSPYANEEAARSANNGSYPPDL 181
            |:|||||.||.||||.||.:.|:||||::||.:.|||||||:||.||.|.||||:||||:.||||
Mouse   133 RHLVGVCYTEEEAKALAEEVEVQDGPNDDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDL 197

  Fly   182 SYIVSARKGGEDYVFSLLTGYCDPPAGFALRDGLYFNPYFSGGAIAMGKVVDNEVVSFEDPNVPA 246
            ||||.||.||||||||||||||:||.|.:||:||||||||.|.||.|...:..||:.::| ..||
Mouse   198 SYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQAIGMAPPIYTEVLEYDD-GTPA 261

  Fly   247 SAAQIAKDVCVFLKWTSEPETDERRLLLIKVTLISTFLIGISYYIKRFKWSTLKSRKIFFIP 308
            :.:|:||||..||:|.||||.|.|:.:.:|:.|:...|:.::|.:||.|||.|||||:.:.|
Mouse   262 TMSQVAKDVATFLRWASEPEHDHRKRMGLKMLLMMGLLLPLTYAMKRHKWSVLKSRKLAYRP 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1LNP_651683.1 CYT1 73..300 CDD:225413 137/226 (61%)
Cytochrom_C1 80..299 CDD:280350 135/218 (62%)
Cyc1NP_079843.1 Cytochrom_C1 96..314 CDD:308011 135/218 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845480
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2857
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 370 1.000 Inparanoid score I2111
Isobase 1 0.950 - 0 Normalized mean entropy S421
OMA 1 1.010 - - QHG54185
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003553
OrthoInspector 1 1.000 - - otm43879
orthoMCL 1 0.900 - - OOG6_102032
Panther 1 1.100 - - O PTHR10266
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2430
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.710

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