DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyt-c1L and cyc1

DIOPT Version :10

Sequence 1:NP_651683.1 Gene:Cyt-c1L / 43457 FlyBaseID:FBgn0039651 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001032470.1 Gene:cyc1 / 564379 ZFINID:ZDB-GENE-031105-2 Length:307 Species:Danio rerio


Alignment Length:301 Identity:169/301 - (56%)
Similarity:210/301 - (69%) Gaps:9/301 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LAMSGIQRTSVRPRISF--PGRGSGFT----GNRKLLGALGAL-TGTAGLLIYALETSVDASSDC 72
            :..||..||.:....:|  |.....|.    |.:..|..:|.| ||.|||.: .|:.||.||...
Zfish     7 VVFSGTGRTLLNTSKAFHTPRASMSFASLPKGKKIALTTIGVLTTGGAGLAL-MLQQSVKASDLE 70

  Fly    73 VHPAHQHWNHKGLLSALDKESVRRGYTVYKEVCSSCHSLQYMAYRNLVGVCMTEAEAKAEAEAIT 137
            :||....|:|.|.||:||..||||||.|||:|||:|||::|:|:||||||..||.|.|..||.|.
Zfish    71 LHPPTYPWSHGGFLSSLDHASVRRGYQVYKQVCSACHSMEYLAFRNLVGVSHTEDEVKTLAEEIE 135

  Fly   138 VRDGPNEEGEYYERPGKLSDHFPSPYANEEAARSANNGSYPPDLSYIVSARKGGEDYVFSLLTGY 202
            |.|||::.||.:.|||||||:||.||||.||||:||||:.||||||||:||.|||||||||||||
Zfish   136 VVDGPDDNGEMFTRPGKLSDYFPKPYANPEAARAANNGALPPDLSYIVNARHGGEDYVFSLLTGY 200

  Fly   203 CDPPAGFALRDGLYFNPYFSGGAIAMGKVVDNEVVSFEDPNVPASAAQIAKDVCVFLKWTSEPET 267
            ||||||.:||:|||:||||.|.||.|...:.|||:.::| ..||:.:|:|||||.||:|.:|||.
Zfish   201 CDPPAGVSLREGLYYNPYFPGQAIGMAPPIYNEVLEYDD-GTPATMSQVAKDVCTFLRWAAEPEH 264

  Fly   268 DERRLLLIKVTLISTFLIGISYYIKRFKWSTLKSRKIFFIP 308
            |:|:.:.:||.|....||.:.|||||.|||.||||||.:.|
Zfish   265 DDRKRMGLKVLLGGALLIPLIYYIKRHKWSVLKSRKIAYRP 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1LNP_651683.1 Cytochrom_C1 80..299 CDD:426633 139/218 (64%)
cyc1NP_001032470.1 Cytochrom_C1 78..294 CDD:426633 137/216 (63%)

Return to query results.
Submit another query.