DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-c1L and cyc1

DIOPT Version :9

Sequence 1:NP_651683.1 Gene:Cyt-c1L / 43457 FlyBaseID:FBgn0039651 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001032470.1 Gene:cyc1 / 564379 ZFINID:ZDB-GENE-031105-2 Length:307 Species:Danio rerio


Alignment Length:301 Identity:169/301 - (56%)
Similarity:210/301 - (69%) Gaps:9/301 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LAMSGIQRTSVRPRISF--PGRGSGFT----GNRKLLGALGAL-TGTAGLLIYALETSVDASSDC 72
            :..||..||.:....:|  |.....|.    |.:..|..:|.| ||.|||.: .|:.||.||...
Zfish     7 VVFSGTGRTLLNTSKAFHTPRASMSFASLPKGKKIALTTIGVLTTGGAGLAL-MLQQSVKASDLE 70

  Fly    73 VHPAHQHWNHKGLLSALDKESVRRGYTVYKEVCSSCHSLQYMAYRNLVGVCMTEAEAKAEAEAIT 137
            :||....|:|.|.||:||..||||||.|||:|||:|||::|:|:||||||..||.|.|..||.|.
Zfish    71 LHPPTYPWSHGGFLSSLDHASVRRGYQVYKQVCSACHSMEYLAFRNLVGVSHTEDEVKTLAEEIE 135

  Fly   138 VRDGPNEEGEYYERPGKLSDHFPSPYANEEAARSANNGSYPPDLSYIVSARKGGEDYVFSLLTGY 202
            |.|||::.||.:.|||||||:||.||||.||||:||||:.||||||||:||.|||||||||||||
Zfish   136 VVDGPDDNGEMFTRPGKLSDYFPKPYANPEAARAANNGALPPDLSYIVNARHGGEDYVFSLLTGY 200

  Fly   203 CDPPAGFALRDGLYFNPYFSGGAIAMGKVVDNEVVSFEDPNVPASAAQIAKDVCVFLKWTSEPET 267
            ||||||.:||:|||:||||.|.||.|...:.|||:.::| ..||:.:|:|||||.||:|.:|||.
Zfish   201 CDPPAGVSLREGLYYNPYFPGQAIGMAPPIYNEVLEYDD-GTPATMSQVAKDVCTFLRWAAEPEH 264

  Fly   268 DERRLLLIKVTLISTFLIGISYYIKRFKWSTLKSRKIFFIP 308
            |:|:.:.:||.|....||.:.|||||.|||.||||||.:.|
Zfish   265 DDRKRMGLKVLLGGALLIPLIYYIKRHKWSVLKSRKIAYRP 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1LNP_651683.1 CYT1 73..300 CDD:225413 141/226 (62%)
Cytochrom_C1 80..299 CDD:280350 139/218 (64%)
cyc1NP_001032470.1 CYT1 66..297 CDD:225413 143/231 (62%)
Cytochrom_C1 78..296 CDD:280350 139/218 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590047
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2857
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 370 1.000 Inparanoid score I2087
OMA 1 1.010 - - QHG54185
OrthoDB 1 1.010 - - D439021at33208
OrthoFinder 1 1.000 - - FOG0003553
OrthoInspector 1 1.000 - - otm24321
orthoMCL 1 0.900 - - OOG6_102032
Panther 1 1.100 - - O PTHR10266
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2430
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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