DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-c1L and Cyt-c1

DIOPT Version :10

Sequence 1:NP_651683.1 Gene:Cyt-c1L / 43457 FlyBaseID:FBgn0039651 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_647958.1 Gene:Cyt-c1 / 38612 FlyBaseID:FBgn0035600 Length:307 Species:Drosophila melanogaster


Alignment Length:297 Identity:197/297 - (66%)
Similarity:230/297 - (77%) Gaps:7/297 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GIQRTSVRPRIS------FPGRGSGFTGNRKLLGALGALTGTAGLLIYALETSVDASSDCVHPAH 77
            |::.....|.:|      ....||..:||:||:|||||:||..|.||||||.||.||...||...
  Fly    10 GLRLLKSAPALSLQQAKNLSSAGSWASGNKKLIGALGAITGGVGALIYALEQSVQASGGEVHSPA 74

  Fly    78 QHWNHKGLLSALDKESVRRGYTVYKEVCSSCHSLQYMAYRNLVGVCMTEAEAKAEAEAITVRDGP 142
            |.||||||..|||.:||||||.|||:|||:|||:||:||||||||..||||||||||.|||:|||
  Fly    75 QLWNHKGLFDALDHQSVRRGYEVYKQVCSACHSMQYIAYRNLVGVTHTEAEAKAEAEQITVKDGP 139

  Fly   143 NEEGEYYERPGKLSDHFPSPYANEEAARSANNGSYPPDLSYIVSARKGGEDYVFSLLTGYCDPPA 207
            ::.|.||.|||||||:|||||.||||||:||||:||||||||||||||||||:|||||||.|.||
  Fly   140 DDTGNYYTRPGKLSDYFPSPYPNEEAARAANNGAYPPDLSYIVSARKGGEDYIFSLLTGYHDAPA 204

  Fly   208 GFALRDGLYFNPYFSGGAIAMGKVVDNEVVSFEDPNVPASAAQIAKDVCVFLKWTSEPETDERRL 272
            |..||:|.||||||.||||:|.:|:.|||:.:|| ..|.:.:|:||||..|||||||||.|:|:.
  Fly   205 GVVLREGQYFNPYFPGGAISMAQVLYNEVIEYED-GTPPTQSQLAKDVATFLKWTSEPEHDDRKQ 268

  Fly   273 LLIKVTLISTFLIGISYYIKRFKWSTLKSRKIFFIPE 309
            |||||..|..||..|||||||.|||:||||||.|:|:
  Fly   269 LLIKVIGILGFLTVISYYIKRHKWSSLKSRKIVFVPK 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1LNP_651683.1 Cytochrom_C1 80..299 CDD:426633 159/218 (73%)
Cyt-c1NP_647958.1 Cytochrom_C1 77..295 CDD:426633 159/218 (73%)

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