DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-c1L and cyc-1

DIOPT Version :9

Sequence 1:NP_651683.1 Gene:Cyt-c1L / 43457 FlyBaseID:FBgn0039651 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_492207.1 Gene:cyc-1 / 172582 WormBaseID:WBGene00000869 Length:285 Species:Caenorhabditis elegans


Alignment Length:268 Identity:125/268 - (46%)
Similarity:175/268 - (65%) Gaps:3/268 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GNRKLLGALGALTGTAGL-LIYALETSVDASSDCVHPAHQHWNHKGLLSALDKESVRRGYTVYKE 103
            |:::.|.||..:|..:|: |:||||.||.||.|.|||....|.|.|..|:.|..||||||.|||:
 Worm     8 GSKRGLAALAGVTAASGMGLVYALENSVSASGDNVHPYALPWAHSGPFSSFDIASVRRGYEVYKQ 72

  Fly   104 VCSSCHSLQYMAYRNLVGVCMTEAEAKAEAEAITVRDGPNEEGEYYERPGKLSDHFPSPYANEEA 168
            ||::|||::::.||:.|...|||.||||||....:.| .:::|...:|||.|:|..|:||.|::|
 Worm    73 VCAACHSMKFLHYRHFVDTIMTEEEAKAEAADALIND-VDDKGASIQRPGMLTDKLPNPYPNKKA 136

  Fly   169 ARSANNGSYPPDLSYIVSARKGGEDYVFSLLTGYCDPPAGFALRDGLYFNPYFSGGAIAMGKVVD 233
            |.:||||:.|||||.:..||.||:||||||||||.:.|||..:.||..:||||.||.|:|.:.:.
 Worm   137 AAAANNGAAPPDLSLMALARHGGDDYVFSLLTGYLEAPAGVKVDDGKAYNPYFPGGIISMPQQLF 201

  Fly   234 NEVVSFEDPNVPASAAQIAKDVCVFLKWTSEPETDERRLLLIKVTLISTFLIGISYYIKRFKWST 298
            :|.:.::| ..||:.:|.||||..|:.|.:||..|.|:...:|:..:..|:..:..|.||..||.
 Worm   202 DEGIEYKD-GTPATMSQQAKDVSAFMHWAAEPFHDTRKKWALKIAALIPFVAVVLIYGKRHIWSF 265

  Fly   299 LKSRKIFF 306
            .||:|..|
 Worm   266 TKSQKFLF 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c1LNP_651683.1 CYT1 73..300 CDD:225413 105/226 (46%)
Cytochrom_C1 80..299 CDD:280350 102/218 (47%)
cyc-1NP_492207.1 Cytochrom_C1 49..264 CDD:366950 100/216 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163631
Domainoid 1 1.000 259 1.000 Domainoid score I1072
eggNOG 1 0.900 - - E1_COG2857
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 295 1.000 Inparanoid score I1665
Isobase 1 0.950 - 0 Normalized mean entropy S421
OMA 1 1.010 - - QHG54185
OrthoDB 1 1.010 - - D439021at33208
OrthoFinder 1 1.000 - - FOG0003553
OrthoInspector 1 1.000 - - otm14400
orthoMCL 1 0.900 - - OOG6_102032
Panther 1 1.100 - - O PTHR10266
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2430
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.760

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