DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mesh1 and RSH3

DIOPT Version :10

Sequence 1:NP_651682.1 Gene:Mesh1 / 43456 FlyBaseID:FBgn0039650 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_564652.2 Gene:RSH3 / 841853 AraportID:AT1G54130 Length:715 Species:Arabidopsis thaliana


Alignment Length:158 Identity:47/158 - (29%)
Similarity:73/158 - (46%) Gaps:32/158 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YAAFK-HRQQRRKDPQETPYVNHVINVSTILSVEACITDEG----VLMAALLHDVVEDTDASFED 74
            |.|.| ||.|.|....  ||:.|.:..:.:|:      |.|    |::|.:|||.::|:..|::.
plant   220 YEAEKAHRGQMRATGD--PYLQHCVETAMLLA------DIGANSTVVVAGILHDTLDDSFMSYDY 276

  Fly    75 VEKLFGPDVCGLVREVTDDKSLEKQERK-----------RLQIENAAKSSCRAKLIKLADKLDNL 128
            :.:.||..|..||..|:....|.|..|:           ||.....|.:..||.||||||:|.|:
plant   277 ILRTFGSGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNM 341

  Fly   129 RDLQVNTPTGWTQERRDQYFVWAKKVVD 156
            ..|....|.     :|.::   ||:.::
plant   342 MTLYALPPV-----KRQRF---AKETLE 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mesh1NP_651682.1 HDc 13..136 CDD:473873 43/136 (32%)
RSH3NP_564652.2 SpoT 197..>565 CDD:440086 47/158 (30%)

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