DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG14515 and LOC100489839

DIOPT Version :9

Sequence 1:	NP_651681.2	Gene:	CG14515 / 43454	FlyBaseID:	FBgn0039648	Length:	168	Species:	Drosophila melanogaster
Sequence 2:	XP_017949106.2	Gene:	LOC100489839 / 100489839	-ID:	-	Length:	550	Species:	Xenopus tropicalis

Alignment Length:	164	Identity:	45/164 - (27%)
Similarity:	68/164 - (41%)	Gaps:	22/164 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 LSLELLLL----IGAAVAFPDG---APADTCVKQRANQPNHGKARSQPAHSNPYEVVADAQTYHP 65
            :...||:|    ..:..:||.|   |..||.:      |.|..:..|.. ::||.:.....|:..
Frog     1 MEARLLVLFSGYFASVFSFPSGQISASCDTML------PQHRGSTPQTT-ASPYFITVSNTTFKS 58

  Fly    66 GQQISVVIYPHSDQSTVFRGFFLQARDANSNEWIGEWVQSENTKTIPEC-----SAITHSDNRDK 125
            |..|:|.|  .|:....|:||.|:|.....:...|.:..:........|     ||::|:.:..|
Frog    59 GDSITVTI--QSNSGNTFKGFLLEALSVGGDTATGTFTITNGDTQGLSCSAGPNSAVSHTSDSSK 121

  Fly   126 LGAKLIWKAPQNKRGQVYFTGTVLQEYGTFWSDI 159
            ......|.||.. .|.|.|..||||.:.||||.:
Frog   122 SSVTTSWTAPSG-AGPVRFRATVLQGFSTFWSGV 154

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG14515	NP_651681.2	Reeler	30..163	CDD:260081	37/135 (27%)
LOC100489839	XP_017949106.2	Reeler	28..151	CDD:396550	35/132 (27%)
		DOMON_SDR_2_like	169..327	CDD:187686
		Cyt_b561_FRRS1_like	292..505	CDD:176490
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910