DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11898 and cftr

DIOPT Version :10

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_001038348.1 Gene:cftr / 559080 ZFINID:ZDB-GENE-050517-20 Length:1485 Species:Danio rerio


Alignment Length:1505 Identity:403/1505 - (26%)
Similarity:695/1505 - (46%) Gaps:282/1505 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QPNPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQV-SSFLLGHWEQELK--R 70
            |.:||..||..|::||.||..|:.||.:..|.|||:|:. ||.::..: :..|...|::|:.  :
Zfish     2 QRSPVEDANCLSRYFFWWTNPIMRKGFKEKLRPSDVYQA-PSQDAADILAERLEKEWDREVASGK 65

  Fly    71 SKPNVLRMIFKAYGWSFVPASIVYSIMAIAVHTTQPLMLGGLVSFFSESTGKITKHSAYLYAMGV 135
            .||::||.:.:.|...|:....:..| ..|..|.||.:||.:::.| :...:..:.:.|..|.|:
Zfish    66 KKPSLLRAMARCYIKPFLLFGFLLYI-GEATKTVQPQLLGRIIASF-DPAHEPERANGYFLAFGL 128

  Fly   136 VLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGYAISLMATDLPTFN 200
            .|......|...|.|..|..:|.::|:|...::|:|.|::|....:...:|..:|||:.:|..|:
Zfish   129 GLLFTARFLLLQPAMFGLHHLGMQIRIALFSIIYKKTLKLSSRVLDKISTGQLVSLMSANLGKFD 193

  Fly   201 ESFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIARYKRSSADVGDE 265
            :|....|.:|..||:.::...:|::||...:...|..|.....|||:.:..:..||.....:.::
Zfish   194 QSLGMAHFIWISPLQCILCTGLIWELIDVNSFCALAAISLLGVLQAFLSHKMGPYKAQKVLLTNK 258

  Fly   266 RVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIR--GS-TYIYAGLQCTGMISKLSLFL 327
            |:.|.:||:..:..:|.|.||:....||..:|::|:...|  || .|.|:.          :.|.
Zfish   259 RLALTSEIMENLHSVKAYGWEEIMETLIKNIRQDEVKLTRKIGSLRYFYSS----------AYFF 313

  Fly   328 SLVTYVFTGDI-------VTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVKDFLFQ 385
            |.:..:....:       :..:::|...||...|..::....|.:|.||.:|..:..::::||.:
Zfish   314 SAIFVIVAAVVPHALSRGINLRRIFTTLSYCMVLRMTVTRQLPGSIQMWYDTMRLIWKIEEFLSK 378

  Fly   386 HENPADGGVHNFKEAEDNPEHGNFFGRTHKPKAEVKSITVHKLSASWDQ---------KKQEKRH 441
            .|         :|..|.:              ..:..:.:..::||||:         |::.|.:
Zfish   379 EE---------YKLMEYD--------------LSITELELQDVTASWDEGPGELLERIKQENKAN 420

  Fly   442 RH-----------------IEDVSFQAQDQQFVGIVGTVGAGKSTLLQVILGELDIISGSVEVNG 489
            .|                 ::|:|.:.:..:.:.:.|::|:|||:||..|||||...||.:..:|
Zfish   421 GHHNGDAGLFFTNLYVAPVLKDISLKLKKGEMLAVTGSMGSGKSSLLMTILGELVPSSGKIRHSG 485

  Fly   490 VLSYAPQEPWLLRGSLRDNILFTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGG 554
            .:||:.|..|::.|::||||||...|||.||..|::.|.|:.|:..||..|.|.:.|||.:||||
Zfish   486 RISYSSQTAWIMPGTIRDNILFGLTYDEYRYKSVVKACQLEEDLAALPEKDKTPMAEGGLNLSGG 550

  Fly   555 QKARVSLARAVYRKADIYLLDDPLSAVDSHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHL 619
            |||||:|||||||.||:||||.|.:.:|....|.:.|:||.:.::.|.|||||::::.|:..|.:
Zfish   551 QKARVALARAVYRDADLYLLDAPFTHLDIATEKEIFDKCLCKLMASKTRILVTNKIEHLKRADKI 615

  Fly   620 VLLEGG---------------------------------------------RISV---------- 629
            :||..|                                             |:||          
Zfish   616 LLLHNGESFFYGTFPELQSERPDFSSLLLGLEAYDNISAERRCSILTETLHRVSVDESAGMQPER 680

  Fly   630 ----------------------------------------------------------------- 629
                                                                             
Zfish   681 SAFRQVPPTKPMYIDERKASVIVNPLGVARKASFIQVPEEEVRRTLPDRKFSLVPENELVDESFM 745

  Fly   630 -----------------------------QGHYDALKKLIRFRMSVANDVEVAKLRAMRT----D 661
                                         ||..:.|:...|.|:||....|:|....:.|    |
Zfish   746 GSDVYHNHGVHMAGQRRQSVLAFMTNAQGQGRREHLQSSFRRRLSVVPQSELASELDIYTRRLSD 810

  Fly   662 SVYEEPEPRKSLSQEEHMDR------HEIEQQFKEQQQIGSVKLQTYKEYFKVLGHPLVVVLILL 720
            |.|:    ...:.:||:::.      .|||:.|:      :.|..||..|.. ....|:.|||.:
Zfish   811 STYD----MTGILEEENIEACLTDEIDEIEETFE------TTKWNTYVRYVS-NNKSLLYVLIFI 864

  Fly   721 MFVVA-RSSEATMDIFLSKWATWEETEPNQHEPIPEYHRTRLRMMILYTFLILCTLIFYVLRTF- 783
            :|:.| ..:.:...|||.....|.| |..:.||....|.........|...:..|..:|:|..: 
Zfish   865 LFIAAIEIAGSVAGIFLITDELWRE-EHQRSEPNMTKHSNASSSGQTYAITVTPTSSYYILYIYV 928

  Fly   784 ---------GFFM------MTLRISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDVLAIDV 833
                     |||.      .|:.||.::|.::...|:.|.|.......:|||:|||:.|:..||.
Zfish   929 ATSESLLAMGFFRGLPFVHTTITISKKLHQKMLHAVLSAPMSVLNTMKTGRIMNRFTKDMATIDD 993

  Fly   834 NLPQAMMDSIEFAVNALAVLAVVSTANIWLLIPATVVVALLYGCRCLYIGASRSLKRIETISRSP 898
            .||..|.|.::..|..:..:.|||....::.:.||.:..:....|..::...:.||::||.:|||
Zfish   994 MLPLLMFDFVQLTVVVVGCILVVSIVRPYIFLAATPLAIIFIVMRKYFLRTGQQLKQLETEARSP 1058

  Fly   899 IYSHTNATFKGLATIRALNGTKYMERDFHYYQNENTSALYLHVSINRAFAFWTDLICVLYILAVT 963
            |:||...:.|||.||||.....|.|..||...|.:|:..:|::|..|.|.|..|::.|.:.....
Zfish  1059 IFSHLIMSLKGLWTIRAFERQAYFEALFHKTLNTHTATWFLYLSTLRWFLFRADILFVFFFTLAA 1123

  Fly   964 FSFLLFDKHRGYYSGDVGLAITQSMKLVLMCQAGMRQTVELENMMTSVERVMEYVNIPSE-PAYE 1027
            :..:..::.:   .|::|:.|..:|.::...|..:..::.::.||.||:||.:::::||| |..:
Zfish  1124 WIAVGTNQDK---PGEIGIIICLAMLILGTFQWCVATSIAVDGMMRSVDRVFKFIDLPSETPKPD 1185

  Fly  1028 TEESVNL---------PKHWPSGGQLDFRDLRLRYSNHGPYILKGLTFTIRGEEKIGIVGHTAAG 1083
            ..:..:|         ...||..||::.|:|.::|:..|..:||.|:|:..|.:::||:|.|.:|
Zfish  1186 KGKDSDLIIENVDAQADSSWPHRGQIEVRNLTVKYTEAGHAVLKNLSFSAEGRQRVGILGRTGSG 1250

  Fly  1084 KSSIVHALFRLAHINGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLRFNLDPFEEKTDEE 1148
            |||:.:||.:|.:.:|.|||||...:::.|...|:...::||...:|:|.||.||||:...:|||
Zfish  1251 KSSLFNALLKLVYTDGEISIDGVNWNKMPLQKWRKAFGVVPQKVFIFTGPLRMNLDPYGCHSDEE 1315

  Fly  1149 LWLALEAVKLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIMDEATANVDPE 1213
            ||...|.|.||..:....|.::.:|...|...|.|.:||:||||::|...:||::||.:|::||.
Zfish  1316 LWRVAEEVGLKTVIEQFPDKLDFQLEYGGYVLSNGHKQLICLARSILSGARILLLDEPSAHLDPV 1380

  Fly  1214 TDNLIQEAIHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELLHNRHGYLHRFVEK 1278
            |..::::.:...|:.||:|...|::..:::....:::|.|:|.......:|| |...:|     |
Zfish  1381 TIKVLKKTLRQSFSTCTILLSEHKVEPLLECQSFLMMDKGQVKTYDSIQKLL-NETSHL-----K 1439

  Fly  1279 TGVGTAQHLR 1288
            ..:..|:.|:
Zfish  1440 QAISPAERLK 1449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 MRP_assoc_pro 2..1268 CDD:188098 398/1483 (27%)
cftrNP_001038348.1 CFTR_protein 1..1485 CDD:273530 403/1505 (27%)
Disordered R region. /evidence=ECO:0000250|UniProtKB:P13569 653..826 18/176 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1452..1485
PDZ-binding. /evidence=ECO:0000250|UniProtKB:P13569 1483..1485
Blue background indicates that the domain is not in the aligned region.

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