DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11898 and l(2)03659

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster


Alignment Length:1334 Identity:521/1334 - (39%)
Similarity:802/1334 - (60%) Gaps:79/1334 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAVHEQRQ---PNPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGH 63
            ||.:|:.:   .||..::||.|...|.:|..|..||.::.||.:|||......:|..:.:.|...
  Fly    77 SAQNEKEKVLPENPRARSNFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDILGNRLCAS 141

  Fly    64 WEQELKRS--KPNVLRMIFKAYGWSFVPASIVYSIMAIAVHTTQPLMLGGLVSFFSESTGKITKH 126
            ||:|||..  .|:::|.:.:.:||......:...::.:.:.|.||:.|..|:|:||....  ..:
  Fly   142 WERELKNDGRSPSLVRALLRVFGWQLGFPGLAIFVVELGLRTLQPIFLVKLISYFSGEPD--AAN 204

  Fly   127 SAYLYAMGVVLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGYAISL 191
            :.:.||:..::.|.::.:...|....:..|..::|:|...:::||.||::..|.....||:.::|
  Fly   205 AGFYYAVAQIVISALTVMILTPTTFGIHHVCFKMRVAMGSMIFRKALRLTKGALGDTTSGHVVNL 269

  Fly   192 MATDLPTFNESFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIARYK 256
            ::.|:|..:.:.|..|.||.|||:.:|..|::||.||..||.|:..::.|:|:|.:.....:..:
  Fly   270 ISNDIPRLDSAPYTVHYLWVGPLQVLVITYLMYQEIGISAVFGVLFMLLFMPIQMYLGTRTSAIQ 334

  Fly   257 RSSADVGDERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYIYAGLQCTG--M 319
            ..:|:..|.|::::||||:|:|::||||||:.|.:::...|::||::||...|| .|.....  :
  Fly   335 LKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEMNTIRQGQYI-RGFDFARRIV 398

  Fly   320 ISKLSLFLSLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVKDFLF 384
            :|::::|||||.||..|.:.|.:..|::.:||:.|..::....|.||....:......||:.|:.
  Fly   399 LSRVAIFLSLVGYVILGKVFTPEIAFMITAYYNVLLAAMSIYVPSAIIQTAQFLTSIRRVEQFMQ 463

  Fly   385 QHE-NPADGGVHNFKE-AEDNPEHGNFFGRTHKPKAEV--KSITVHKLSASWDQKKQEKRHRHIE 445
            ..| ..:|......|: ...||...|       .:|::  .:|::..|.|.||....:..   :.
  Fly   464 SEELGSSDKSEGPSKDTVPGNPPSNN-------NEADLLKSAISIRDLKAKWDPNSPDYT---LS 518

  Fly   446 DVSFQAQDQQFVGIVGTVGAGKSTLLQVILGELDIISGSVEVNGVLSYAPQEPWLLRGSLRDNIL 510
            .::.:.:....|.::|..|:|||:|:|.|||||...||.::|||.|||..||.||..|::|.|||
  Fly   519 GINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGSLSYTSQESWLFSGTVRQNIL 583

  Fly   511 FTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARVSLARAVYRKADIYLLD 575
            |.:|.|.|||.||::.|.|:||.:.|||.|:|.|||.||:||||||||:||||:|||||.|||||
  Fly   584 FGQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKARISLARSVYRKASIYLLD 648

  Fly   576 DPLSAVDSHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHYDALKK-- 638
            |||||||:.|::.|.|:|:...|.....:||||:.|.|.|||.:|:|..|:|...|.|::|.|  
  Fly   649 DPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANGQIKALGDYESLLKTG 713

  Fly   639 LIRFRMSVANDVEVAKLRAMRTDSV-YEEPEPRK-----------------------SLSQEEHM 679
            ||....|::           :||.. .||.||..                       |.|.:||:
  Fly   714 LITGLGSLS-----------KTDKAKTEEQEPLNLNSPDNKNEVTPIKENSEQTVGGSSSGKEHV 767

  Fly   680 DRHEIEQQFKEQQQIGSVKLQTYKEYFKVLGHPLVVVLILLMFVVARSSEATMDIFLSKWATWEE 744
            :|          |:.|.:.|..|::||:..|..:..:::|...|:|:.:....|.||:.|...|.
  Fly   768 ER----------QESGGISLALYRKYFQAGGGLVAFLVMLSSSVLAQVAVTGGDYFLTYWVKKES 822

  Fly   745 TEPNQHEPIPEYHRTRLRMMILYTFLILCTLIFYVLRTFGFFMMTLRISLRIHDQLFQGVIRAFM 809
            |.....|  .|...::...:..||.:|:.::|..:..:|..|.:..:.|:|:|:.:|..|.||.|
  Fly   823 TAAGHGE--MEDMESKSMDVYKYTLIIILSVIMNLSSSFLLFNIAKKASIRLHNTIFNRVTRADM 885

  Fly   810 HFFTLATSGRILNRFSSDVLAIDVNLPQAMMDSIEFAVNALAVLAVVSTANIWLLIPATVVVALL 874
            |||::...|.|||||:.|:..:|..||..::|.::.|:....::.|::..|..||:|..::..:.
  Fly   886 HFFSINKHGSILNRFTKDMSQVDEVLPVVLVDVMQIALWLAGIIIVIANVNPLLLVPTLMLSVIF 950

  Fly   875 YGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATIRALNGTKYMERDFHYYQNENTSALYL 939
            |..|.||:..||.|||:|.|:|||:|||..|:..||.|||||:..:.:|::|..||:.::||.::
  Fly   951 YHLRNLYLKTSRDLKRVEAINRSPVYSHLAASLNGLTTIRALDAQRVLEKEFDSYQDAHSSAFFM 1015

  Fly   940 HVSINRAFAFWTDLICVLYILAVTFSFLLFDKHRGYYSGDVGLAITQSMKLVLMCQAGMRQTVEL 1004
            ::|.::||.:..:.|||:||..:|.||..|....|   .||||.|||:|.|:.|.|.|:|||.||
  Fly  1016 YISTSQAFGYCMNCICVIYISIITLSFFAFPPGNG---ADVGLVITQAMGLIDMVQWGVRQTAEL 1077

  Fly  1005 ENMMTSVERVMEYVNIPSEPAYETEESVNLPKHWPSGGQLDFRDLRLRYSNH--GPYILKGLTFT 1067
            ||.||:||||:||.:|..|...|..:....||.||..|::.|::|.|||:.:  ...:||.|:|.
  Fly  1078 ENTMTAVERVVEYESIEPEGMLEAPDDKKPPKTWPEQGEIIFKELNLRYTPNAKAENVLKSLSFV 1142

  Fly  1068 IRGEEKIGIVGHTAAGKSSIVHALFRLAHINGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSG 1132
            |:..||:||||.|.|||||:::|||||::.:|.:.||..:|.|:|||||||:||||||:||||||
  Fly  1143 IQPREKVGIVGRTGAGKSSLINALFRLSYTDGSVLIDTRDTRQMGLHDLRRQISIIPQEPVLFSG 1207

  Fly  1133 SLRFNLDPFEEKTDEELWLALEAVKLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQ 1197
            ::|:|||||:|.:||:||..||.|||||.||:|.||:..::.:.|.|||:|||||||||||:||:
  Fly  1208 TMRYNLDPFDEYSDEKLWGCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAILRE 1272

  Fly  1198 NKILIMDEATANVDPETDNLIQEAIHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPH 1262
            |:||:||||||||||:||.|||..|.:||..||||||||||||::|:|:|||:|.|||||.|.|:
  Fly  1273 NRILVMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPY 1337

  Fly  1263 ELLHNRHG-YLHRFVEKTGVGTAQHLRHLAEQSY 1295
            ||:..... ..|..|.::|..:.:.|..:|::::
  Fly  1338 ELMTKSDSKVFHNLVNQSGRASYEGLLKIAQETF 1371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 513/1297 (40%)
ABC_membrane 92..358 CDD:294371 82/267 (31%)
ABCC_MRP_domain1 423..626 CDD:213217 102/202 (50%)
ABC_membrane 762..988 CDD:294371 85/225 (38%)
ABCC_MRP_domain2 1042..1261 CDD:213211 137/220 (62%)
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 513/1292 (40%)
ABC_membrane 171..437 CDD:294371 82/268 (31%)
ABCC_MRP_domain1 499..699 CDD:213217 102/202 (50%)
ABC_membrane 799..1045 CDD:294371 86/247 (35%)
ABCC_MRP_domain2 1115..1336 CDD:213211 137/220 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440898
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I246
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm14754
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - P PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

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