DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11898 and rdog

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster


Alignment Length:1372 Identity:665/1372 - (48%)
Similarity:909/1372 - (66%) Gaps:84/1372 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RQPNPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGHWEQELKRSK 72
            |..||.|||||||:|.|.|.|::..:|||..|...:||:...:|:|.:|::.....||.|||||.
  Fly    10 RPKNPFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFAELWEDELKRSN 74

  Fly    73 PNVLRMIFKAYGWSFVPASIVYSIMAIAVHTTQPLMLGGLVSFFSESTGKITKHSAYLYAMGVVL 137
            |:|:|||.:|||..|||..:.:||......:..||.|||||.:|:.:...|::::|||||||:|:
  Fly    75 PSVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLGGLVGYFATNQTDISENTAYLYAMGIVI 139

  Fly   138 CSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGYAISLMATDLPTFNES 202
            |.|:..:.||||:.|:|:||:::|||.:||:|||.|:||.::.|.|:.|.||::::.||..|:.:
  Fly   140 CMLVPVITFHPFIFYIFQVGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRAINILSNDLGRFDVA 204

  Fly   203 FYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIARYKRSSADVGDERV 267
            ....|:.|:||:|.::..:::|:.||..||:|:..:::|||||||||:..|.|::.:|:..|.||
  Fly   205 LCFLHDTWKGPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTAERTDMRV 269

  Fly   268 KLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYIYAGLQCTGMISKLSLFLSLVTY 332
            |||||||..:|:|||||||||||::|.:||.:|:.:|||:.||:|.|.||.|||.||:||:|.:|
  Fly   270 KLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYIHAALGCTSMISPLSVFLALCSY 334

  Fly   333 VFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVKDFLFQHENPADGGVH-- 395
            |:.||.:|:|||:.|:||::.||||::..||::|....|..|.|.|.||||...:. |:..::  
  Fly   335 VYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLLDGDK-AEVPINLE 398

  Fly   396 ------------NFKEAEDNPE-HGNFFG---------RTHKPKAEVKSITVHKLSASWDQKKQE 438
                        :.|:.:.|.| :|:...         |.:.|:|..|.:.:..:|||||   ..
  Fly   399 ANQQTGKNKRKISKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKNVSASWD---TS 460

  Fly   439 KRHRH--IEDVSFQAQDQQFVGIVGTVGAGKSTLLQVILGELDIISGSVEVNGVLSYAPQEPWLL 501
            ..|.:  |||.|...:||....:||.||||||:.|.|:|||:.|..|...|:|.:|||.||.|:.
  Fly   461 DGHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVHGKISYASQESWVF 525

  Fly   502 RGSLRDNILFTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARVSLARAVY 566
            .|::||||:|.|.|:|:||.:|::||.|:||:|.||.||.|.|||.|.|||||||||||||||||
  Fly   526 EGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKARVSLARAVY 590

  Fly   567 RKADIYLLDDPLSAVDSHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQG 631
            ||||||||||||||||:||.|.:.|||:.:|||.||||||||:||.|..|:||:|:..|:|..||
  Fly   591 RKADIYLLDDPLSAVDTHVGKHIFDRCIRDFLSNKIRILVTHQVQYLFDVEHLLLMGSGKIMAQG 655

  Fly   632 HYDALKKLIRFRMSVANDVEVAKLRAMRTDSVYEEPEPRKSLSQEEHM----DRHEIEQQFKEQQ 692
            .|..|::..:|:.......:.:.:......|.....:..||:..:.:.    |.| :|...:|||
  Fly   656 SYQELQRSRQFQFLEQTQHDESGIDTHSVSSYLSRSDSEKSMEHQHNQLLRPDEH-VEDVNQEQQ 719

  Fly   693 QIGSVKLQTYKEYFKVLGHPLVVVLILLMFVVARSSEATMDIFLSKWATWEE------------- 744
            .:||:|:..|..|.|.|....::.:::.:||.||.....:|.|||:|..|||             
  Fly   720 TVGSIKMHVYASYIKALDSTFLLGIVISLFVCARIMLTGVDYFLSRWVIWEEQIAVNRTTTLLNE 784

  Fly   745 ---TEPNQHEPIPEYHRT----------------RLRMMILYTFLILCTLIFYVLRTFGFFMMTL 790
               |..|...||   :.|                |..:::.|..::..|||.|::||||||.|.|
  Fly   785 TDTTIANDTLPI---NATDPYIAPLLASDIQAGIRQELVLFYATILGATLIVYLIRTFGFFKMCL 846

  Fly   791 RISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDVLAIDVNLPQAMMDSIEFAVNALAVLAV 855
            ||||.:||:||:|:.||.|:||...:|||||||||.|:..:|.:||..::|.:.|.::...|:.:
  Fly   847 RISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTDLPHTLLDCLAFIIDVSGVVII 911

  Fly   856 VSTANIWLLIPATVVVALLYGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATIRALNGTK 920
            |:.||.||||||.::..:|...|.||:..|||:||:|:|||||::|.||.||:||.|||||....
  Fly   912 VAIANYWLLIPAAIIGVILGMIRYLYVNTSRSVKRLESISRSPVFSLTNQTFQGLTTIRALQAQS 976

  Fly   921 YMERDFHYYQNENTSALYLHVSINRAFAFWTDLICVLYILAVTFSFLL----FDKHRGYYSGDVG 981
            .:|::||.|||.||||.:|.:|..||||.|:|::|::|:.||||||||    ||      |||||
  Fly   977 ALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDVLCIVYMTAVTFSFLLLKDEFD------SGDVG 1035

  Fly   982 LAITQSMKLVLMCQAGMRQTVELENMMTSVERVMEYVNIPSEPAYETEESVNLPKHWPSGGQLDF 1046
            |||..|..:..|||.|||||.||||.|||||||:||...|||...||.|.......|||.|:::|
  Fly  1036 LAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEYTEQPSEALLETPEKFKPKSEWPSKGRIEF 1100

  Fly  1047 RDLRLRYSNHGPYILKGLTFTIRGEEKIGIVGHTAAGKSSIVHALFRLAHINGHISIDGFETSQL 1111
            .:.:||||.....:||.|.|||...|||||||.|.||||||:.::||||...|.|.||..:...:
  Fly  1101 INFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFRLACNEGMIRIDDVDIEHI 1165

  Fly  1112 GLHDLRRRISIIPQDPVLFSGSLRFNLDPFEEKTDEELWLALEAVKLKEFVSNLKDGINCRLHDC 1176
            ||||||.::||||||||||||:||:||||.:|::|||:|.||..|:|:.:||.|..|:|||::|.
  Fly  1166 GLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKALGDVELRSYVSTLIGGLNCRMYDG 1230

  Fly  1177 GANFSMGQRQLVCLARALLRQNKILIMDEATANVDPETDNLIQEAIHTKFAHCTVLTIAHRLHTV 1241
            |:|||:|||||||||||:||.||||||||||||||||||.|||:.|.:|||||||||||||||||
  Fly  1231 GSNFSVGQRQLVCLARAILRHNKILIMDEATANVDPETDKLIQQTIRSKFAHCTVLTIAHRLHTV 1295

  Fly  1242 MDNDRVMVVDMGRVVELGHPHELLHNRHGYLHRFVEKTGVGTAQHLRHLAEQSYRKRVLGRKSED 1306
            ||:|||:|:|.|.|.|||||:|||....|||.:.|:.||..|:..|:..|||||.|::||    |
  Fly  1296 MDSDRVLVMDAGEVRELGHPYELLQRTGGYLRQLVDNTGAATSFALQQAAEQSYSKQILG----D 1356

  Fly  1307 QGSVLDL 1313
            ..:..||
  Fly  1357 DTAAEDL 1363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 645/1324 (49%)
ABC_membrane 92..358 CDD:294371 128/265 (48%)
ABCC_MRP_domain1 423..626 CDD:213217 119/204 (58%)
ABC_membrane 762..988 CDD:294371 117/229 (51%)
ABCC_MRP_domain2 1042..1261 CDD:213211 143/218 (66%)
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 653/1344 (49%)
ABC_membrane 94..360 CDD:294371 128/265 (48%)
ABCC_MRP_domain1 448..650 CDD:213217 119/204 (58%)
ABC_membrane 821..1046 CDD:294371 118/230 (51%)
ABCC_MRP_domain2 1096..1315 CDD:213211 143/218 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440866
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I246
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm14754
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - P PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

Return to query results.
Submit another query.