DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11898 and abcc3

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:XP_009304645.1 Gene:abcc3 / 323301 ZFINID:ZDB-GENE-050517-16 Length:1540 Species:Danio rerio


Alignment Length:1417 Identity:456/1417 - (32%)
Similarity:703/1417 - (49%) Gaps:209/1417 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAVHEQRQPN--PVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGHW 64
            |||.:   ||  |.|.|.|.|:..|.|...:.:||.:..|:..||:....:..|..|...||..|
Zfish   195 SAVMD---PNVCPETTAGFLSRMTFWWFTRMAIKGYKSPLENKDLWSLNKNDSSELVVPGLLNQW 256

  Fly    65 E---------------------------------------------QELKRSKPNVLRMIFKAYG 84
            |                                             |:.|..:|:.|..:.:|:|
Zfish   257 EVEKSKAHSSDDQNVKEQVTFTKPGSGAESNHVNESPEEAEVLLSKQQQKSRQPSFLWALLRAFG 321

  Fly    85 WSFVPASIVYSIMAIAVHTTQPLMLGGLVSFFSESTGKITKHSAYLYAMGVVL--CSLISGLFFH 147
            ..|:..| .:.::...:....|.:|..|::|..:|    ...|.:.||:..::  .||:..|..|
Zfish   322 PYFLIGS-AFKLLQDLITFINPQLLRMLIAFTKQS----DVPSWWGYALAFLMFGTSLLQTLILH 381

  Fly   148 PFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGYAISLMATDLPTFNESFYCFHELWRG 212
            ...:|.|..|.|:|....|.:|||.|.::..|..|...|..::||:.|...|.:.....:.||..
Zfish   382 QHFQYCFVTGMRLRTGIIGAIYRKALVITNEAKRSSTVGEVVNLMSVDAQRFMDLTTFLNMLWSA 446

  Fly   213 PLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIARYKRSSADVGDERVKLMNEIIAAM 277
            ||:..:.::.::|.:|...:.|:..:|..||..|:.|.....|:.......|:|:||||||:..:
Zfish   447 PLQIFLALFFLWQNLGPSVLAGVAVMVLLIPFNAFIAMKTRTYQVEQMKYKDDRIKLMNEILNGI 511

  Fly   278 QLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYIYAGLQCTGMISKLSLFLSLVT--YVFTG---- 336
            :::|:||||.||...|.::|::|:..:|.:.|:.|   .:.|....:.||..:|  .||..    
Zfish   512 KVLKLYAWEPSFRDKILQIRQKELHVLRKTAYLSA---LSTMAWTSAPFLVALTSFAVFVNVDEK 573

  Fly   337 DIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVKDFLFQHENPADGGVHNFKEAE 401
            :::.::|.|:..|.::.|... |:..|..|:..|:..|...|::||| .|:             |
Zfish   574 NVLDAEKAFVSLSLFNILRFP-LNMLPQVISSIVQASVSLKRLQDFL-NHD-------------E 623

  Fly   402 DNPEHGNFFGRTHKPKAEVKSITVHKLSASWDQKKQEKRHRHIEDVSFQAQDQQFVGIVGTVGAG 466
            .:||..:     .|......:::|.....||.::.|.    .:::::........:.:||.||.|
Zfish   624 LDPESVD-----RKSNTTEYAVSVVNGKFSWAKRDQV----ILDNINVLVPQGSLLAVVGHVGCG 679

  Fly   467 KSTLLQVILGELDIISGSVEVNGVLSYAPQEPWLLRGSLRDNILFTEPYDEQRYLEVLRVCHLDR 531
            |::|:..:|||::.:.|.:.:.|.::|.||:.|:...:|||||||..||.||:|..||..|.|..
Zfish   680 KTSLISALLGEMEKLDGQISIRGSVAYVPQQAWIQNATLRDNILFGRPYVEQKYRCVLEACALTP 744

  Fly   532 DVEQLPLGDSTRVGEGGASLSGGQKARVSLARAVYRKADIYLLDDPLSAVDSHVSKMLLDRCLNE 596
            |:|.||.||.|.:||.|.:|||||:.|||||||:|.:||:|||||||||||:||:|.:.|..:..
Zfish   745 DLEVLPGGDLTEIGEKGINLSGGQRQRVSLARALYSEADVYLLDDPLSAVDAHVAKHIFDHVIGP 809

  Fly   597 --FLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHY-DALKKLIRFRMSVANDVEVAKLRAM 658
              .|..|.||||||.:..|..|:::::|..||:|..|.| |.|::         |......||..
Zfish   810 EGALKGKTRILVTHGISFLPQVNNILVLVDGRVSEMGSYQDLLRQ---------NGAFAEFLRNY 865

  Fly   659 RTDSVYEEPEPRKSLSQEE----------HMDR-------HEIEQQFKEQQQI------------ 694
            ..:.:.|:.|...|..:||          |.|.       :|..:||..|..|            
Zfish   866 SLEDIIEDDELTVSFDEEEEEFPEDALSNHTDMVDNEPVVNEARRQFMRQMSIMSNDVENPKKMS 930

  Fly   695 ---------------------------------GSVKLQTYKEYFKVLGHPLVVVLILLMFVVAR 726
                                             |.||||.|.||.|.:| ||:.:.|..::....
Zfish   931 RRRRCSERKHPETPTEKKEPKVEKLIQAETTETGRVKLQVYWEYVKAIG-PLLALFICFLYGCQS 994

  Fly   727 SSEATMDIFLSKWATWEETEPNQHEPIPEYHRTRLRM---------MILYTFLILCTLIFYVLRT 782
            ::....:.:||:|     |....|....|..:||:.:         :::.:..:||       |.
Zfish   995 AAAIGANFWLSEW-----TNDALHNRTQEMLQTRVGVYAALGISQGVLILSICLLC-------RA 1047

  Fly   783 FGFFMMTLRISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDVLAIDVNLPQAM---MDSIE 844
            :.    |||.:...|..:...|:||...||....|||:|||||.||..||..:|..:   |.:..
Zfish  1048 YS----TLRAARHTHQHMLNSVLRAPQAFFEATPSGRVLNRFSKDVDTIDSLIPDNIDIWMRTFW 1108

  Fly   845 FAVNALAVLAVVSTANIWLLIPATVVVALLYGCRCLYIGASRSLKRIETISRSPIYSHTNATFKG 909
            :.||.|.|.:|::...:.:::|   ::...:..:..|:..||.|||:|::||||||||.:.:..|
Zfish  1109 YTVNVLMVCSVLTPIFLIVIVP---LMLFYWWVQRFYVATSRQLKRLESVSRSPIYSHFSESITG 1170

  Fly   910 LATIRAL--NGTKYMERDFHYYQNENTSALYLHVSINRAFAFWTDLI--CVLYILAVTFSFLLFD 970
            .:.|||.  |....:..|...  :||..:.|..:..||......:.|  |:: :.|..|:....|
Zfish  1171 TSVIRAYGRNAAFVLMSDNKV--DENQKSYYPGIVSNRWLGVRIEFIGNCIV-LFAALFAVTGKD 1232

  Fly   971 KHRGYYSGDVGLAITQSMKLVLMCQAGMRQTVELENMMTSVERVMEYVNIPSEPAYETEESVNLP 1035
            |   ...|.|||:::.::::.:.....:|.|.:||:.:.:||||.||....:|..:|..|. ..|
Zfish  1233 K---LSPGLVGLSVSYALQVTMSLNWMVRMTSDLESNIVAVERVKEYSETQTEAPWEVLEK-KPP 1293

  Fly  1036 KHWPSGGQLDFRDLRLRYSNHGPYILKGLTFTIRGEEKIGIVGHTAAGKSSIVHALFRLAH-ING 1099
            ..||..|.::|.|..:||......:||.::..:||.|||||||.|.|||||:...||||.. ..|
Zfish  1294 PDWPPLGNVEFVDYSVRYREGLDLVLKNISLKVRGGEKIGIVGRTGAGKSSMTLCLFRLLEAAAG 1358

  Fly  1100 HISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLRFNLDPFEEKTDEELWLALEAVKLKEFVSN 1164
            .|.||..:.|::||||||.:::||||:||||||:||.||||||..:|||:|.|||...|::||:|
Zfish  1359 EIVIDDVKISEIGLHDLRSKLTIIPQEPVLFSGTLRMNLDPFERYSDEEVWKALELSHLQKFVTN 1423

  Fly  1165 LKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIMDEATANVDPETDNLIQEAIHTKFAHC 1229
            ....:.....:.|.|.|:||||||||||||||:.:||::|||||.||.|||:|||..|.|:|..|
Zfish  1424 QAAKLELECSEGGENLSVGQRQLVCLARALLRKTRILVLDEATAAVDLETDDLIQSTIRTEFQDC 1488

  Fly  1230 TVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELLHNRHGYLHRFVEKTGV 1281
            ||.||||||:|:||..||:|:|.|::.|...|..|: |:.|......:..|:
Zfish  1489 TVFTIAHRLNTIMDYTRVLVLDKGQIAEFDTPTNLM-NQKGLFFGMAKDAGL 1539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 450/1395 (32%)
ABC_membrane 92..358 CDD:294371 73/273 (27%)
ABCC_MRP_domain1 423..626 CDD:213217 87/204 (43%)
ABC_membrane 762..988 CDD:294371 68/241 (28%)
ABCC_MRP_domain2 1042..1261 CDD:213211 119/219 (54%)
abcc3XP_009304645.1 MRP_assoc_pro 10..1539 CDD:188098 455/1415 (32%)
ABC_membrane 330..595 CDD:279056 73/272 (27%)
ABCC_MRP_domain1 640..841 CDD:213217 87/204 (43%)
ABC_membrane 985..1253 CDD:279056 77/292 (26%)
ABCC_MRP_domain2 1300..1520 CDD:213211 119/219 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586011
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.