DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11898 and mrp-3

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_001359552.1 Gene:mrp-3 / 181677 WormBaseID:WBGene00003409 Length:1505 Species:Caenorhabditis elegans


Alignment Length:1381 Identity:409/1381 - (29%)
Similarity:681/1381 - (49%) Gaps:198/1381 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGHWEQE-LKRS---- 71
            |...|||.|:...:|..:|:..|.:|.|...|::|    ::|.....:|...|:.| ||::    
 Worm   194 PEENANFISRQLLLWFTQIISLGYERTLVADDVFE----MDSQMDQEYLKARWKTEWLKQTEKAR 254

  Fly    72 ------------------------------------------KPNVLRMIFKAYGWSFVPASIVY 94
                                                      :|:|:..:::...|..:..|.: 
 Worm   255 EKQVKLDDKRERARTGSEKAPLLGTFNNYGAVNLDDKDRVIVQPSVIVTLWQIMKWEILGGSFI- 318

  Fly    95 SIMAIAVHTTQPLMLGGLVSFFSESTGKITKHSAYLYAMGVVLCSLISGLFFHPFMKYLFRVGSR 159
            ..::..:....|..|..|:.|.......:.  :....|:|:.|...|..||.:.:...:.|||::
 Worm   319 KFLSDLLQFANPTFLNYLILFIETPNAPLI--NGIGLAVGLFLAGQIKSLFMNTYFIAMTRVGAK 381

  Fly   160 VR--LACAGLVYRKFLRVSVAADNSGVSGYAISLMATDLPTFNESFYCFHELWRGPLEGVVFVYI 222
            ::  |:||  ||.|.|.:|..|......|..:::::.|:..|........:.|..|.:.::.:.:
 Worm   382 IQTMLSCA--VYEKSLLLSNTARRERTVGEMVNILSIDVDRFRMITPQIQQYWSSPFQIIICMVL 444

  Fly   223 IYQLIGWPAVVGLGTIVAFIPL--------QAWAARAIARYKRSSADVGDERVKLMNEIIAAMQL 279
            :.|.||.....|:..:::.:|:        :.|..| :.:||       |||::|:||::..:::
 Worm   445 LSQTIGVAVWAGIVVMISIVPINICVSMITKRWQLR-LMKYK-------DERIRLINEVLNGIKV 501

  Fly   280 IKMYAWEKSFAKLIGKVRKEEMDSIRGSTYIYAGLQCTGMISKLSLFLSLVTYVFT----GDIVT 340
            :|:.|||.:..:.|.:||.:|:..|:.|..:.....|..:.:.:.:.||..| ||.    .:::|
 Worm   502 VKLSAWETAMEETIERVRDKELKMIKQSALLKTFADCLNVGAPVFVALSSFT-VFVLIDPKNVLT 565

  Fly   341 SQKVFIVASYYDHLNDSLLHSWPLAINMWVET--FVVAN-RVKDFLFQHENPADGGVHNFKEAED 402
            ....|:..|.::.|...|:    :|..:..:|  .||:| ||:.||.:.|...        .|.|
 Worm   566 PNIAFVSLSLFNLLRGPLM----MAAELVAQTVQLVVSNKRVRTFLCEKEVDT--------AAID 618

  Fly   403 NPEHGNFFGRTHKPKAEVKSITVHKLSASWDQKKQEKRHRHIEDVSFQAQDQQFVGIVGTVGAGK 467
            ....|..:..|         :.:|..|.:||..:.    |.:.|:.|.|..::.|.:||:||:||
 Worm   619 KEIRGELYTNT---------VEIHSGSFAWDSAEA----RILSDIEFLAGSKELVTVVGSVGSGK 670

  Fly   468 STLLQVILGELDIISGSVEVNGVLSYAPQEPWLLRGSLRDNILFTEPYDEQRYLEVLRVCHLDRD 532
            |:||...|||::.:.|.|.|.|.::|..|:||:|..||:.|:|.....::..|.:|:..|.|..|
 Worm   671 SSLLLAALGEMEKVCGYVGVRGSVAYLSQQPWILNQSLKKNVLMQADLNDVLYKKVIESCALKED 735

  Fly   533 VEQLPLGDSTRVGEGGASLSGGQKARVSLARAVYRKADIYLLDDPLSAVDSHVSKMLLDRCL--N 595
            ::|||.||.|.:||.|.:||||||||::||||||:..|:|.|||||||||:||.|.:.|..:  |
 Worm   736 LKQLPDGDDTEIGEKGINLSGGQKARIALARAVYQSKDVYFLDDPLSAVDAHVGKHIFDNVIGPN 800

  Fly   596 EFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHYDALKKLIRFRM---------------- 644
            ..||...|||||:....|:....:::::.|||...|.|:.|...:..|.                
 Worm   801 GMLSHTTRILVTNCTSFLQESGKIIVMKDGRIKHCGTYNELLTDVEAREYLQEVDNEYAQAQESS 865

  Fly   645 ---------------SVANDVEVAKL-------RAMRTDSVYEEPEPRKSLSQEEHMDRHEIEQQ 687
                           |:|:...:::|       |.....|:.|:.:|...::             
 Worm   866 GEESGGEENSDILPGSIASGSRMSRLSRLSKISRKKSKSSIVEKKKPDALIT------------- 917

  Fly   688 FKEQQQIGSVKLQTYKEYFKVLGHPLVVVLILLMFVVARSSEATMDIFLSKWAT-WEETEPNQHE 751
             ||:..||.|....|..|||.:|    :|..:|.:.:|.....:..:..|.|.| |.:...:.:.
 Worm   918 -KEEAAIGRVNPGVYLLYFKAMG----IVTYVLPYAIAVVLNVSFALGRSLWLTAWSDANIDINH 977

  Fly   752 PIPEYHRTRLRMMILYTFLILCTLIFYVLRTFGFFMMTLRI------SLRIHDQLFQGVIRAFMH 810
            |.......||.   :|....:..:||.      ||.:.|.:      |..:|..|...|:|..:.
 Worm   978 PDTMSVGARLG---VYAGFGITEVIFL------FFSLVLLLIGGVAASKNLHKPLLHNVLRNPLS 1033

  Fly   811 FFTLATSGRILNRFSSDVLAIDVNLPQAMMDSIEFAVNALAVLAVVSTAN---IWLLIPATVV-- 870
            :|.:...|||:||.:.|:..:|:.|..:....:...:|.:..:.:||...   |.::||..::  
 Worm  1034 YFDITPIGRIINRLAKDMEVVDLRLSSSFRFLVMALINMVQTVLIVSYTTPLFIAIIIPVFIIYF 1098

  Fly   871 VALLYGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATIRALNGTKYMERDFHYYQNENTS 935
            ..|.|.     |.::|.|:||.:::||||:|:.:.|.:|::|:||...:....|....:.|.:..
 Worm  1099 FVLKYS-----IKSTRQLQRIASLTRSPIFSNFSETLQGISTVRAFQWSDEFVRRNDEHLNTHVK 1158

  Fly   936 ALYLHVSINRAFAFWTDLI--CVLYILAVTFSFLLFDKHRGYYSGDVGLAITQSMKLVLMCQAGM 998
            ..|.....||..:...:|:  .|::..|:   ..:..|..|..:|.:||:::.|:.:..|....:
 Worm  1159 CSYYSQMANRWLSIRLELLGNIVIFSAAI---LAIIGKESGITAGMLGLSVSYSLNITFMLNMFV 1220

  Fly   999 RQTVELENMMTSVERVMEYVNIPSEPAYETEESVNLPKHWPSGGQLDFRDLRLRYSNHGPYILKG 1063
            ||..|:|..:.||||:.||....||..:..:.: |||.:||:||.::..|...||.:....:||.
 Worm  1221 RQINEVETNVVSVERIDEYSKTKSEAEWRLDNN-NLPSNWPTGGAVNIEDYSCRYRDELDLVLKQ 1284

  Fly  1064 LTFTIRGEEKIGIVGHTAAGKSSIVHALFRLAH-INGHISIDGFETSQLGLHDLRRRISIIPQDP 1127
            ::..|...:|:|:.|.|.|||||:..||||:.. .:|:||||...||.:||||||.:::||||:.
 Worm  1285 ISLNILPGQKVGVCGRTGAGKSSLALALFRIVEAADGNISIDQTITSHIGLHDLREKLTIIPQEN 1349

  Fly  1128 VLFSGSLRFNLDPFEEKTDEELWLALEAVKLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLAR 1192
            |||:.:||||:||..:.||::||||||...||..|..|...:...:.:.|.|||:|||||:||.|
 Worm  1350 VLFANTLRFNIDPKGQFTDQQLWLALENSNLKAHVELLPHKLESPVAEGGENFSVGQRQLLCLTR 1414

  Fly  1193 ALLRQNKILIMDEATANVDPETDNLIQEAIHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVE 1257
            ||||::|:|::|||||.:|..||.::|..|..|||..|::||||||||::|.||::|:|.||:||
 Worm  1415 ALLRKSKVLVLDEATAGIDNRTDTMVQATIREKFADSTIITIAHRLHTIIDYDRIIVMDAGRIVE 1479

  Fly  1258 LGHPHELLHNRHGYLH 1273
            .|.|.|||.||:...:
 Worm  1480 DGIPGELLKNRNSQFY 1495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 407/1374 (30%)
ABC_membrane 92..358 CDD:294371 62/279 (22%)
ABCC_MRP_domain1 423..626 CDD:213217 86/204 (42%)
ABC_membrane 762..988 CDD:294371 56/238 (24%)
ABCC_MRP_domain2 1042..1261 CDD:213211 108/219 (49%)
mrp-3NP_001359552.1 MRP_assoc_pro 25..1501 CDD:188098 409/1381 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I5384
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

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