DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11898 and pgp-10

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_509205.2 Gene:pgp-10 / 180981 WormBaseID:WBGene00004004 Length:1382 Species:Caenorhabditis elegans


Alignment Length:1474 Identity:320/1474 - (21%)
Similarity:578/1474 - (39%) Gaps:351/1474 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VKGLQRNLDPSDLY--ETEPSLESTQVSSFLLGHWEQELKRSKPNVLRM-IFKAYGWSFVPA-SI 92
            :|.:...::||.||  :.:.|.::..|:      .:..|.:|..:..:: .|:.|...:..| ||
 Worm    34 LKSMIYPIEPSTLYIDDLKNSKKAYDVT------MDDPLDKSSDSKPKLGFFEPYKRLYAFADSI 92

  Fly    93 VYSIMAIAVHTT------QP---LMLGGLVSF-FSESTGKI--------------TKHS---AYL 130
            ...:||:.:.:.      .|   |::|..||. .....||:              ..||   |::
 Worm    93 DMQLMAMGLFSALLQSALPPFVWLIMGNFVSISILREEGKLGLKNLTSDYPIDDQFAHSATPAFI 157

  Fly   131 YAMGVVLCSLISGLFFHPFMKYLFRVGS-----RVRLACAGLVYRKFLRVSVAADNSGVSGYAIS 190
            ..:|:.:...|:..    ..:..:.:.|     |::.|    ..||.|.:.::...|..||:..:
 Worm   158 SMLGLSIAMFIAAF----CQRIAWEISSIRQVFRIKKA----YIRKLLLMDISWLESRQSGHVAA 214

  Fly   191 LMATDLPTFNESFYCFHELWRGPLEGVVFV--YIIYQL-----IGWPAVVGLGTIVAFIPLQAWA 248
            ::       .||....:......|..|||:  |::..:     |.|.  |.|...:| |||    
 Worm   215 ML-------QESADSIYNGISDHLPMVVFILSYLLVNIGVCLYIQWD--VTLFMCLA-IPL---- 265

  Fly   249 ARAIAR--YKRSSADVGDERVKLMNEIIAAM-QLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYI 310
             ..|:|  |.:..|:..:|..||.|:|...: :.........|||....|:.|.|..|...|...
 Worm   266 -LIISRILYSKWFANTMEEETKLQNKITNLVNETFNCITTVISFAAQKQKINKFEKLSAEHSKLT 329

  Fly   311 YAGLQCTGMISKLSLFLSLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVV 375
            ...|:.:.:...|:..| |...:|||.:...  ::.||      ::|......|||||   .::.
 Worm   330 EERLRSSVVFDSLTQIL-LTELIFTGALCYG--IWRVA------DNSPGRLCALAINM---LYMC 382

  Fly   376 ANRVKDFLFQHENPADGGVHNFKEAEDNPEHGNFFGRTHKPKAEVKSITV--------------- 425
            ...:.  :..|.|.|.....|.||..:        ....:||.||:..::               
 Worm   383 VTSIS--IGFHMNGATRAKDNAKEICE--------VLNEQPKIEVELASIDNNIDYVPVTRCKYR 437

  Fly   426 --------------HKLSASWDQKKQEKRHRHIEDVSFQAQDQQFVGIVGTVGAGKSTLLQVILG 476
                          ..:..|:..:|:.:   .:..:||:.:..:.:.|||:.|:|||||..::|.
 Worm   438 RQSMKFMGKGALHFRDIHFSYPSRKETE---VLRGISFKVEAGEKIAIVGSSGSGKSTLTALLLR 499

  Fly   477 ELDIISGSV-------------EVNGVLSYAPQEPWLLRGSLRDNILFTE-PYDEQRYLEVLRVC 527
            ..|...|::             ::.|..|...|||.|..|::.|||.:.. ...:|...:..|..
 Worm   500 FYDPTKGAILLDGENIKTMCPDDLRGQCSLVSQEPVLFDGTISDNIRYGRLDATQQEINDAARKV 564

  Fly   528 HLDRDVEQLPLGDSTRVGEGGASLSGGQKARVSLARAVYRKADIYLLDDPLSAVDSHVSKMLLDR 592
            ...:.:..||.|..|||||.|..||||||.||::||||.||..:.:.|:..||:| ::.:..::.
 Worm   565 GAWKFINSLPDGMQTRVGERGHQLSGGQKQRVAIARAVIRKPIVLIFDEATSALD-NIHEEEVNA 628

  Fly   593 CLNEFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHYDALKKLIRFRMSVANDVEVAKLRA 657
            .::........|.:.||:..:::.|.:::|..|:|..:|..|.|       ::.||.:.......
 Worm   629 AIDLASEGLTTITIAHRLSTIKNSDRIIVLHEGKIVEEGVPDEL-------IADANGIFHKMYND 686

  Fly   658 MRTDSVYEEP-------------EPRKSLSQEEHMDRHEIEQQFKEQQQIGSVKL-QTYK----- 703
            .|.|.:.::.             :.:.|.|...:||..:..:.:......|:.|| ::|.     
 Worm   687 QRLDQLTQQHQQLHQQQAKPPSLQQQMSFSPPPNMDPDQQRRAWARSSLGGNKKLGKSYSVNSME 751

  Fly   704 -------------------EYFKV------------------------------------LGHPL 713
                               :|.||                                    .|.||
 Worm   752 KEKLKLPVMSKKKSERLDYKYSKVHSMDVKQHTDSMHDDDDLPGKETNFTVLKDLIYSYRTGLPL 816

  Fly   714 V-----------VVLILLMFVVARSSEATMDIFLSKWATWEETEPNQHEPIPEYHRTRLRMMI-- 765
            :           |..:|:.|.||    :.::|.::                |:..|. |::.|  
 Worm   817 LAGAIPTTIVRAVFYLLICFQVA----SVLEISIA----------------PDEERA-LQIFIVA 860

  Fly   766 -LYTFLILCTLIFYVL-RTF------GF--FMMTLRISLRIHDQLFQGVIRAFMHFF--TLATSG 818
             :||.||:...||..| |.|      ||  ||         .:::|:.|:|....:|  ...:.|
 Worm   861 AIYTALIIVKTIFEALGRIFIALYGHGFCKFM---------RNEMFRKVLRHGAAYFDEERNSPG 916

  Fly   819 RILNRFSSDVLAIDVNLPQAMMDSIEFAVNALAVLAVVSTANIWL----------LIPATVVVAL 873
            |::::    |:.....|.:.|...::..:..:..........:|:          ..||..|:.:
 Worm   917 RLVHK----VINESSTLNEIMEQKLDMLIPGVVCSLFSIVCALWINWKMALLCSFQFPAYFVIRI 977

  Fly   874 LYGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATIRALNGTKYMERDFHYYQ-----NEN 933
            |.    :..|..|..:.::...::.  :..:.....::||:|.|      ...|:|.     .:.
 Worm   978 LQ----IREGTKRQRQMVDEEKKAA--NLASVVLANMSTIKAYN------LQSHFYNVFCDALKP 1030

  Fly   934 TSALYLHVSINRAFAFWTDLICVLYILAVTFSFLLFDKHRGYYSGDV-----GLAITQSMKLVLM 993
            .|......|:..|..|.........::|:|..|           |.|     .:::...|::||:
 Worm  1031 VSQCMQKQSLISALVFACQYSFTYILIAITLHF-----------GKVMMLANEISVFDYMRVVLL 1084

  Fly   994 CQAG-------MRQTVELENMMTSVERVMEYVNIPSEPAYETEESVNLPKHWPSGGQLDFRDLRL 1051
            .|.|       :....:......:.|.||..:..|........|....||   ..|.|..:|:..
 Worm  1085 TQFGANFFSQLIASVSDFTKAQIAAENVMRVIREPPVDMDNLSEEGLRPK---LEGNLCLKDVSF 1146

  Fly  1052 RYSNHGPY--ILKGLTFTIRGEEKIGIVGHTAAGKSSIVHALFRLAH-INGHISIDGFETSQLGL 1113
            ||.:. |.  :|..|...:||.|.|.:||.:.:||||::....|:.: .:|.:.||.:....:..
 Worm  1147 RYPSR-PIVPVLTNLNLKVRGGESIALVGPSGSGKSSVISLFQRMYNATDGVVIIDKYNIKSINP 1210

  Fly  1114 HDLRRRISIIPQDPVLFSGSLRFNLDPFEEKTDEELWLALEAVKLKE---FVSNLKDGINCRLHD 1175
            ..|||.|..:.|:|.|||.:::.|:.....:::..:...:||.|:.:   |:::|..|.:..:.:
 Worm  1211 AYLRRCIVQVGQEPDLFSFTIKENIAFGMMESEATIDKVIEAAKIADIHNFITSLPQGYDTEVGE 1275

  Fly  1176 CGANFSMGQRQLVCLARALLRQNKILIMDEATANVDPETDNLIQEAIH-----TKFAHCTVLTIA 1235
            .||..|.||:|.:.:|||::|:..:|::||||:.:|..::..:|.|..     || ..||.:.||
 Worm  1276 FGAQLSGGQKQRIAIARAIIRKPTVLLLDEATSALDSASEREVQNAFERVKRSTK-TQCTCIQIA 1339

  Fly  1236 HRLHTVMDNDRVMVVDMGRVVELGHPHELLHNRHGYLHRFVEKT 1279
            |||.|:.:.|::.|:..|.:.|.| .||.|.|..|..:...:.|
 Worm  1340 HRLSTIRNVDKIYVIVHGEIAEEG-SHEQLINLKGIYYEMNQMT 1382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 317/1461 (22%)
ABC_membrane 92..358 CDD:294371 65/307 (21%)
ABCC_MRP_domain1 423..626 CDD:213217 60/245 (24%)
ABC_membrane 762..988 CDD:294371 45/259 (17%)
ABCC_MRP_domain2 1042..1261 CDD:213211 71/229 (31%)
pgp-10NP_509205.2 MdlB 73..687 CDD:224055 152/669 (23%)
ABC_membrane 156..381 CDD:294371 58/259 (22%)
ABC_MTABC3_MDL1_MDL2 450..687 CDD:213216 67/247 (27%)
ABC_membrane 823..1099 CDD:294371 59/332 (18%)
MdlB 825..1382 CDD:224055 142/619 (23%)
P-loop_NTPase 1141..1381 CDD:304359 74/242 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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