DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11898 and pgp-9

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_507487.1 Gene:pgp-9 / 180165 WormBaseID:WBGene00004003 Length:1294 Species:Caenorhabditis elegans


Alignment Length:1292 Identity:293/1292 - (22%)
Similarity:521/1292 - (40%) Gaps:295/1292 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 LYAMG-------VVLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGY 187
            ::|.|       :|:|..:|..|...|                   :...:|..:|..:...||.
 Worm   116 IFAAGFLQASCFMVICEKLSNRFRRQF-------------------FHSVMRQEIAWYDKNTSGT 161

  Fly   188 AISLMATDLPTFNESFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAI 252
            ..:.:..:|....|.        .|...|:.| .::.|.||       |..|||  ...|....|
 Worm   162 LSNKLFDNLERVREG--------TGDKVGLAF-QMMAQFIG-------GFAVAF--TYDWLLTLI 208

  Fly   253 ARYKRSSADV-GDERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIR------GSTYI 310
            .........: |....||:  ..||.:..|.||       :.|.:.:|.:.|||      |..| 
 Worm   209 MMSLSPFMMICGLFLAKLL--ATAATKEAKQYA-------VAGGIAEEVLTSIRTVIAFNGQEY- 263

  Fly   311 YAGLQC------------TGMISKLSLFLSLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWP 363
                :|            ||:.....:...|.::.          |.|.|||             
 Worm   264 ----ECKRYEDALEHGKKTGIKKSFLIGAGLASFF----------VIIYASY------------- 301

  Fly   364 LAINMWVET-FVVANRVKD------FL---------------FQHENPADGGVHNFKEAEDN-PE 405
             .:..||.| ||.:.|::.      |.               |.....|.|...:..|..|. ||
 Worm   302 -CLAFWVGTNFVYSGRLESGTVLTVFFSVMMGSMALGQAGQQFATIGTALGAAASLYEVIDRIPE 365

  Fly   406 HGNFFGRTHKPKAEVKSITVHKLSASWDQKKQEKRHRHIEDVSFQAQDQQFVGIVGTVGAGKSTL 470
            ...:......|......|:|:|:..::..:...|   .::.||..||..|.|.:||:.|.||||:
 Worm   366 IDAYSTEGQTPSKISGRISVNKVEFTYPTRADVK---ILKGVSLDAQPGQTVALVGSSGCGKSTI 427

  Fly   471 L------------QVILGELDIISGSV----EVNGVLSYAPQEPWLLRGSLRDNILF--TEPYDE 517
            :            |:::.::.|...::    ::.||:|   |||.|...|:..||.:  ::..||
 Worm   428 IQLLQRFYNPDAGQILIDDIPIEDFNIKYLRQLVGVVS---QEPNLFNTSIEQNIRYGRSDVSDE 489

  Fly   518 QRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARVSLARAVYRKADIYLLDDPLSAVD 582
            . ....|:..:....::..|.|.:|.||:.|..:|||||.|:::|||:.|...|.|||:..||:|
 Worm   490 D-IARALKEANAADFIKTFPEGLNTLVGDRGVQMSGGQKQRIAIARALVRNPKILLLDEATSALD 553

  Fly   583 SHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHYDAL-------KKLI 640
            :. |:.::...|......:..|::.||:..:|:.|.:::::.|::...|.::.|       .:|:
 Worm   554 AE-SESIVQSALENASRGRTTIVIAHRLSTVRNADKIIVMKAGQVMEVGTHETLIEQKGLYHELV 617

  Fly   641 RFRMSVANDVEVAKLRAMRTDSVYEEPEPRKS----LSQEEHMD------------RHEIEQQFK 689
            ..::....|.:..|..|.|..|  .:...||.    .:||..:|            ..||::..|
 Worm   618 HAQVFADVDDKPKKKEAERRMS--RQTSQRKGSVNFKTQESQVDEKPGAPPAPEAAEKEIKRLKK 680

  Fly   690 EQQQIGSVKLQTYKEYFKVLGHP----LVVVLILLMFVVARSSEATMDIFLSKWATWEETEPNQH 750
            |.::.|:||    ...||:|.:.    :.:...::..::..:......:|.|:... ..:.|::.
 Worm   681 ELEEEGAVK----ANLFKILRYARPEWIYIFFAIIAALIQGAVMPAFSLFFSQIIN-VFSNPDRD 740

  Fly   751 EPIPEYHRTRLRMMIL-----YTFLILCTLIFYVLRTFGFFMMTLRISLRIHDQLFQGVIRAFMH 810
            :...:.|...|..::|     .:.|..|:|         |.:...|:::||..::::.|:|....
 Worm   741 QMKKDGHFWALMFLVLAAVQGTSMLFQCSL---------FGVAAERLTMRIRSKVYRNVLRQDAT 796

  Fly   811 FFTLA--TSGRILNRFSSDV----LAIDVNLPQAMMDSIEFAVNALAVLAVVSTANIWLLIPATV 869
            :|.:.  :.|||..|.::|.    .|||..| .::.::|......|.:.........:|::....
 Worm   797 YFDMPKHSPGRITTRLATDAPNIKSAIDYRL-GSIFNAIASVGGGLGIAFYYGWQMAFLVMAIFP 860

  Fly   870 VVALLYGCRCLYIGAS----------------RSLKRIETIS----RSPIY----SHTNATFKG- 909
            .:|:.......|.|.|                .:::.|.|:.    ::.:|    ||.:|...| 
 Worm   861 FMAVGQALMMKYHGGSATSDAKEMENAGKTAMEAIENIRTVQALTLQTKLYNIFCSHLDAPHGGN 925

  Fly   910 --LATIRALNGTKYMERDFHYYQNENTSALYLHVSINRAFAFWTDLIC----------VLYIL-A 961
              .|.||.|.           |...|:...:.:.:   ||.|...||.          ||.:| |
 Worm   926 ISKAIIRGLT-----------YGFANSIQFFTYAA---AFRFGLFLIFDKNVLMEPENVLRVLFA 976

  Fly   962 VTFSFLLFDKHRGYYSGDVGLAITQSMKLV-LMCQAGMRQTVELENMMTSVERVMEYVNIPSEPA 1025
            ::|||           |.:|.|.:...:.: ....||:     :.||:....|:....:..:.|.
 Worm   977 ISFSF-----------GTIGFAASYFPEYIKATFAAGL-----IFNMLEEEPRIDGMTSSGTYPQ 1025

  Fly  1026 YETEESVNLPKHWPSGGQLDFRDLRLRYSNHGPY-ILKGLTFTIRGEEKIGIVGHTAAGKSSIVH 1089
            .              .|::....:..||...... ||:||...::..:.:.:||.:..|||:::.
 Worm  1026 L--------------SGEVKLNKVFFRYPERPAVPILQGLNVHVKPGQTLALVGPSGCGKSTVIS 1076

  Fly  1090 ALFRLAH-INGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLR----FNLDPFEEKTDEEL 1149
            .|.||.. :.|.:::|..:..|:....||:.|:::.|:|:||..|:|    :.|.| .|.|.|::
 Worm  1077 LLERLYDPLEGAVTVDNNDLRQMNPKHLRKHIALVSQEPILFDTSIRENIVYGLQP-GEYTHEQI 1140

  Fly  1150 WLALEAVKLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIMDEATANVDPET 1214
            ..|.....:.:|:..|.||...|:.:.|...|.||:|.:.:||||:|..|||::||||:.:|.|:
 Worm  1141 ETACSKANIHKFIDELPDGYETRVGEKGTQLSGGQKQRIAIARALIRNPKILLLDEATSALDTES 1205

  Fly  1215 DNLIQEAIHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELLHNRHGY 1271
            :..:|.|:.......|.:.:||||.|:::...:|||..|:|||.|..:||:..|..|
 Worm  1206 EKQVQVALDAAAKDRTCIVVAHRLSTIVNAGCIMVVKNGQVVEQGTHNELIAKRGAY 1262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 291/1287 (23%)
ABC_membrane 92..358 CDD:294371 49/253 (19%)
ABCC_MRP_domain1 423..626 CDD:213217 62/220 (28%)
ABC_membrane 762..988 CDD:294371 55/274 (20%)
ABCC_MRP_domain2 1042..1261 CDD:213211 73/224 (33%)
pgp-9NP_507487.1 PTZ00265 28..1262 CDD:240339 292/1290 (23%)
ABC_membrane 50..334 CDD:279056 56/292 (19%)
ABC_MTABC3_MDL1_MDL2 383..620 CDD:213216 66/244 (27%)
ABC_membrane 710..977 CDD:279056 53/291 (18%)
ABC_MTABC3_MDL1_MDL2 1030..1269 CDD:213216 76/234 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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