DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11898 and Abcc3

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_542148.2 Gene:Abcc3 / 140668 RGDID:71101 Length:1523 Species:Rattus norvegicus


Alignment Length:1357 Identity:441/1357 - (32%)
Similarity:702/1357 - (51%) Gaps:156/1357 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PNPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGHWEQEL------ 68
            |.|...|.|||:..|.|..::.:.|.:|.|:.|||:.......|.:|...||..|:::.      
  Rat   206 PCPEASAGFFSRLSFWWFTKLAILGYRRPLEDSDLWSLSEEDCSHKVVQRLLEAWQKQQTQASGP 270

  Fly    69 ---------------------KRSKPNVLRMIFKAYGWSFVPASIVYSIMAIAVHTTQPLMLGGL 112
                                 |..||:.||.:.:.:..|.:..: .:.::...:....|.:|..|
  Rat   271 QTAALEPKIAGEDEVLLKARPKTKKPSFLRALVRTFTSSLLMGA-CFKLIQDLLSFINPQLLSIL 334

  Fly   113 VSFFSESTGKITKHSAYLYAMGVVLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSV 177
            :.|.|:.|.  .....:|.|..:.:.|.:..|..|.....:|.:..|:|.|..|::|||.|.::.
  Rat   335 IRFISDPTA--PTWWGFLLAGLMFVSSTMQTLILHQHYHCIFVMALRIRTAIIGVIYRKALTITN 397

  Fly   178 AADNSGVSGYAISLMATDLPTFNESFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFI 242
            :.......|..::||:.|...|.:.....:.||..||:.::.:|.::|::|..|:.|:..||..|
  Rat   398 SVKREYTVGEMVNLMSVDAQRFMDVSPFINLLWSAPLQVILAIYFLWQILGPSALAGVAVIVLLI 462

  Fly   243 PLQAWAARAIARYKRSSADVGDERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRG- 306
            ||....:..:..|:.......|.|:|||:||:..::::|:||||.:|.:.:..:|:.|:..:|. 
  Rat   463 PLNGAVSMKMKTYQVQQMKFKDSRIKLMSEILNGIKVLKLYAWEPTFLEQVEGIRQSELQLLRKG 527

  Fly   307 ------STYIYAGLQCTGMISKLSLFLSLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLA 365
                  ||:|:.   ||..:..| :.|.:...|...:::.::|.|:..|.::.|... |:..|..
  Rat   528 AYLQAISTFIWV---CTPFMVTL-ITLGVYVCVDKNNVLDAEKAFVSLSLFNILKIP-LNLLPQL 587

  Fly   366 INMWVETFVVANRVKDFLFQHENPADGGVHNFKEAEDNPEHGNFFGRTHKPKAEVKSITVHKLSA 430
            |:...:|.|...|::|||.|.|.              :|:...     .|..:..::||:|..:.
  Rat   588 ISGMTQTSVSLKRIQDFLNQDEL--------------DPQCVE-----RKTISPGRAITIHNGTF 633

  Fly   431 SWDQKKQEKRHRHIEDVSFQAQDQQFVGIVGTVGAGKSTLLQVILGELDIISGSVEVNGVLSYAP 495
            ||.:......|    .::.|......|.:||.||.|||:|:..:|||::.:.|:|.|.|.::|.|
  Rat   634 SWSKDLPPTLH----SLNIQIPKGALVAVVGPVGCGKSSLVSALLGEMEKLEGAVSVKGSVAYVP 694

  Fly   496 QEPWLLRGSLRDNILFTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARVS 560
            |:.|:...:|::|:||.:|.:.:||.:.|..|.|..|::.||.||.|.:||.|.:|||||:.|||
  Rat   695 QQAWIQNCTLQENVLFGQPMNPKRYQQALETCALLADLDVLPGGDQTEIGEKGINLSGGQRQRVS 759

  Fly   561 LARAVYRKADIYLLDDPLSAVDSHVSKMLLDRCLNE--FLSKKIRILVTHRVQLLRHVDHLVLLE 623
            ||||||..|:|:|||||||||||||:|.:.|:.:..  .|:.|.|:||||.:..|...|.:::|.
  Rat   760 LARAVYSDANIFLLDDPLSAVDSHVAKHIFDQVIGPEGVLAGKTRVLVTHGISFLPQTDFIIVLA 824

  Fly   624 GGRISVQGHYDALKKLIRFRMSVAN---------------------DVEVAKLR---AMRTDSVY 664
            .|:|:..|||   .:|::...|.||                     :.||..|.   :..||...
  Rat   825 DGQITEMGHY---SELLQHDGSFANFLRNYAPDENQEANEGVLQHANEEVLLLEDTLSTHTDLTD 886

  Fly   665 EEP---EPRK-------SLSQE-EHMDRHEIEQ------------QFKE-----QQQI---GSVK 698
            .||   |.||       |||.| |..:|..:::            |.||     :::|   |:||
  Rat   887 TEPAIYEVRKQFMREMSSLSSEGEGQNRPVLKRYTSSLEKEVPATQTKETGALIKEEIAETGNVK 951

  Fly   699 LQTYKEYFKVLGHPLVVVLILLMFVVARSSEAT-MDIFLSKWATWEETEPNQHEPIPEYHRTRLR 762
            |..|.:|.|.:|  |...|.:.:....:::.|. .:::||.|.       |..|...:.:.|.:|
  Rat   952 LSVYWDYAKSVG--LCTTLFICLLYAGQNAVAIGANVWLSAWT-------NDVEEHGQQNNTSVR 1007

  Fly   763 MMILYTFLILCTLIFYVLRTFGFFMMTLRISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSD 827
            :.:..|..||..|: .:|..|...:..::.:..:|..|....|||...||....|||||||||.|
  Rat  1008 LGVYATLGILQGLL-VMLSAFTMVVGAIQAARLLHTALLHNQIRAPQSFFDTTPSGRILNRFSKD 1071

  Fly   828 VLAID-VNLPQAMMDSIEFAVNALAVLAVVSTANIWLLIPATVVVALLYG-CRCLYIGASRSLKR 890
            :..|| |..|..:|....|..:...::.:|::..::.::  .:.:|:.|| .:..|:..||.|||
  Rat  1072 IYVIDEVLAPTILMLFNSFYTSISTIVVIVASTPLFCVV--VLPLAVFYGFVQRFYVATSRQLKR 1134

  Fly   891 IETISRSPIYSHTNATFKGLATIRALNGTKYMERDFHYYQ----NENTSALYLHVSINRAFAFWT 951
            :|::|||||:||.:.|..|.:.|||....    :||....    :.|....|.:::.||......
  Rat  1135 LESVSRSPIFSHFSETVTGTSVIRAYGRV----QDFKVLSDAKVDSNQKTTYPYIASNRWLGVHV 1195

  Fly   952 DLI--CVLYILAVTFSFLLFDKHRGYYSGDVGLAITQSMKLVLMCQAGMRQTVELENMMTSVERV 1014
            :.:  ||:...|:   |.:..:: ....|.|||:::.::::.|.....:|...:||:.:.:||||
  Rat  1196 EFVGNCVVLFSAL---FAVIGRN-SLNPGLVGLSVSYALQVTLSLNWMIRTLSDLESNIIAVERV 1256

  Fly  1015 MEYVNIPSEPAYETEESVNLPKHWPSGGQLDFRDLRLRYSNHGPYILKGLTFTIRGEEKIGIVGH 1079
            .||....:|..: ..||...|:.||..|.::||:..:||......:||.||..::|.||:||||.
  Rat  1257 KEYSKTETEAPW-VLESNRAPEGWPRSGVVEFRNYSVRYRPGLELVLKNLTLHVQGGEKVGIVGR 1320

  Fly  1080 TAAGKSSIVHALFR-LAHINGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLRFNLDPFEE 1143
            |.|||||:...||| |....|.|.|||...:.:||||||.:::||||||:||||:||.|||||..
  Rat  1321 TGAGKSSMTLCLFRILEAAEGEIFIDGLNVAHIGLHDLRSQLTIIPQDPILFSGTLRMNLDPFGR 1385

  Fly  1144 KTDEELWLALEAVKLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIMDEATA 1208
            .:||::|..||...|..|||:...|::.:..:.|.|.|:||||||||||||||::::|::|||||
  Rat  1386 YSDEDIWRTLELSHLSAFVSSQPTGLDFQCSEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATA 1450

  Fly  1209 NVDPETDNLIQEAIHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELL 1265
            .:|.|||:|||..|.|:|..||||||||||:|:||.:||:|:|.|.|.|...|..|:
  Rat  1451 AIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLI 1507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 441/1357 (32%)
ABC_membrane 92..358 CDD:294371 68/272 (25%)
ABCC_MRP_domain1 423..626 CDD:213217 87/204 (43%)
ABC_membrane 762..988 CDD:294371 67/233 (29%)
ABCC_MRP_domain2 1042..1261 CDD:213211 117/219 (53%)
Abcc3NP_542148.2 MRP_assoc_pro 7..1522 CDD:188098 441/1357 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345003
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.650

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