DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11898 and CFTR

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_000483.3 Gene:CFTR / 1080 HGNCID:1884 Length:1480 Species:Homo sapiens


Alignment Length:1521 Identity:394/1521 - (25%)
Similarity:705/1521 - (46%) Gaps:262/1521 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QPNPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLEST-QVSSFLLGHWEQELKRSK 72
            |.:|:.||:..||.||.|||.||.||.::.|:.||:|:. ||::|. .:|..|...|::||...|
Human     2 QRSPLEKASVVSKLFFSWTRPILRKGYRQRLELSDIYQI-PSVDSADNLSEKLEREWDRELASKK 65

  Fly    73 -PNVLRMIFKAYGWSFVPASIVYSIMAIAVHTT---QPLMLGGLVSFFSESTGKITKHSAYLYAM 133
             |.::..:.:.:.|.|    :.|.|.......|   |||:||.:::.:.....:....:.|| .:
Human    66 NPKLINALRRCFFWRF----MFYGIFLYLGEVTKAVQPLLLGRIIASYDPDNKEERSIAIYL-GI 125

  Fly   134 GVVLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGYAISLMATDLPT 198
            |:.|..::..|..||.:..|..:|.::|:|...|:|:|.|::|....:....|..:||::.:|..
Human   126 GLCLLFIVRTLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQLVSLLSNNLNK 190

  Fly   199 FNESFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIARYKRSSADVG 263
            |:|.....|.:|..||:..:.:.:|::|:...|..|||.::.....||...|.:.:|:...|...
Human   191 FDEGLALAHFVWIAPLQVALLMGLIWELLQASAFCGLGFLIVLALFQAGLGRMMMKYRDQRAGKI 255

  Fly   264 DERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYI-YAGLQCTGMISKLSLFL 327
            .||:.:.:|:|..:|.:|.|.||::..|:|..:|:.|:...|.:.|: |.............:||
Human   256 SERLVITSEMIENIQSVKAYCWEEAMEKMIENLRQTELKLTRKAAYVRYFNSSAFFFSGFFVVFL 320

  Fly   328 SLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVKDFLFQHENPADG 392
            |::.|.....|:. :|:|...|:...|..::...:|.|:..|.::....|:::|||.:.|     
Human   321 SVLPYALIKGIIL-RKIFTTISFCIVLRMAVTRQFPWAVQTWYDSLGAINKIQDFLQKQE----- 379

  Fly   393 GVHNFKEAEDNPEHGNFFGRTHKPKAEVKSITVHKLSASWDQ--------KKQEKRHRH------ 443
                :|..|.|              .....:.:..::|.|::        .||...:|.      
Human   380 ----YKTLEYN--------------LTTTEVVMENVTAFWEEGFGELFEKAKQNNNNRKTSNGDD 426

  Fly   444 --------------IEDVSFQAQDQQFVGIVGTVGAGKSTLLQVILGELDIISGSVEVNGVLSYA 494
                          ::|::|:.:..|.:.:.|:.||||::||.||:|||:...|.::.:|.:|:.
Human   427 SLFFSNFSLLGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMVIMGELEPSEGKIKHSGRISFC 491

  Fly   495 PQEPWLLRGSLRDNILFTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARV 559
            .|..|::.|::::||:|...|||.||..|::.|.|:.|:.:....|:..:||||.:|||||:||:
Human   492 SQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARI 556

  Fly   560 SLARAVYRKADIYLLDDPLSAVDSHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHLVLLEG 624
            |||||||:.||:||||.|...:|....|.:.:.|:.:.::.|.|||||.:::.|:..|.:::|..
Human   557 SLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHE 621

  Fly   625 G---------------------------------------------RISVQGH------------ 632
            |                                             |.|::|.            
Human   622 GSSYFYGTFSELQNLQPDFSSKLMGCDSFDQFSAERRNSILTETLHRFSLEGDAPVSWTETKKQS 686

  Fly   633 ------------------YDALKKL--------------------IRFRMSVANDVEVAK----- 654
                              .::::|.                    :..|:|:..|.|..:     
Human   687 FKQTGEFGEKRKNSILNPINSIRKFSIVQKTPLQMNGIEEDSDEPLERRLSLVPDSEQGEAILPR 751

  Fly   655 ---------LRAMRTDSVYE-------------------------EPEPR--------KSLSQEE 677
                     |:|.|..||..                         .|:..        :.||||.
Human   752 ISVISTGPTLQARRRQSVLNLMTHSVNQGQNIHRKTTASTRKVSLAPQANLTELDIYSRRLSQET 816

  Fly   678 HMD-RHEIEQQ------FKEQQQIGSVKL-QTYKEYFKVLGHPLVVVLILLMFVVARSSEATMDI 734
            .:: ..||.::      |.:.:.|.:|.. .||..|..|  |..::.:::...|:..:..|...:
Human   817 GLEISEEINEEDLKECFFDDMESIPAVTTWNTYLRYITV--HKSLIFVLIWCLVIFLAEVAASLV 879

  Fly   735 FLSKWATWEETEPNQHEPIPEYHRTRLRMMILYTFLILCTLIFYV----------LRTFGFFM-- 787
            .|  |..  ...|.|.:....:.|..     .|..:|..|..:||          |...|||.  
Human   880 VL--WLL--GNTPLQDKGNSTHSRNN-----SYAVIITSTSSYYVFYIYVGVADTLLAMGFFRGL 935

  Fly   788 ----MTLRISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDVLAIDVNLPQAMMDSIEFAVN 848
                ..:.:|..:|.::...|::|.|.......:|.||||||.|:..:|..||..:.|.|:..:.
Human   936 PLVHTLITVSKILHHKMLHSVLQAPMSTLNTLKAGGILNRFSKDIAILDDLLPLTIFDFIQLLLI 1000

  Fly   849 ALAVLAVVSTANIWLLIPATVVVALLYGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATI 913
            .:..:|||:....::.:....|:......|..::..|:.||::|:..||||::|...:.|||.|:
Human  1001 VIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRSPIFTHLVTSLKGLWTL 1065

  Fly   914 RALNGTKYMERDFHYYQNENTSALYLHVSINRAFAFWTDLICVLYILAVTFSFLLFDKHRGYYSG 978
            ||.....|.|..||...|.:|:..:|::|..|.|....::|.|::.:||||..:|   ..|...|
Human  1066 RAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISIL---TTGEGEG 1127

  Fly   979 DVGLAITQSMKLVLMCQAGMRQTVELENMMTSVERVMEYVNIPSE--PAYETE------------ 1029
            .||:.:|.:|.::...|..:..:::::::|.||.||.:::::|:|  |...|:            
Human  1128 RVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEGKPTKSTKPYKNGQLSKVMI 1192

  Fly  1030 -ESVNLPKH--WPSGGQLDFRDLRLRYSNHGPYILKGLTFTIRGEEKIGIVGHTAAGKSSIVHAL 1091
             |:.::.|.  ||||||:..:||..:|:..|..||:.::|:|...:::|::|.|.:|||:::.|.
Human  1193 IENSHVKKDDIWPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAF 1257

  Fly  1092 FRLAHINGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLRFNLDPFEEKTDEELWLALEAV 1156
            .||.:..|.|.|||.....:.|...|:...:|||...:|||:.|.||||:|:.:|:|:|...:.|
Human  1258 LRLLNTEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEV 1322

  Fly  1157 KLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIMDEATANVDPETDNLIQEA 1221
            .|:..:......::..|.|.|...|.|.:||:||||::|.:.|||::||.:|::||.|..:|:..
Human  1323 GLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRT 1387

  Fly  1222 IHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELLHNRHGYLHRFVEKTGVGTAQH 1286
            :...||.|||:...||:..:::..:.:|::..:|.:.....:||:.|..:.........|....|
Human  1388 LKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERSLFRQAISPSDRVKLFPH 1452

  Fly  1287 LRHLAEQSYRKRVLGRKSEDQGSVLD 1312
             |:.::...:.::...|.|.:..|.|
Human  1453 -RNSSKCKSKPQIAALKEETEEEVQD 1477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 386/1475 (26%)
ABC_membrane 92..358 CDD:294371 70/269 (26%)
ABCC_MRP_domain1 423..626 CDD:213217 77/275 (28%)
ABC_membrane 762..988 CDD:294371 69/241 (29%)
ABCC_MRP_domain2 1042..1261 CDD:213211 74/218 (34%)
CFTRNP_000483.3 CFTR_protein 1..1480 CDD:273530 394/1521 (26%)
ABC_membrane 85..303 CDD:279056 59/218 (27%)
ABCC_CFTR1 389..670 CDD:213258 78/280 (28%)
CFTR_R 639..849 CDD:291094 23/209 (11%)
Disordered R region. /evidence=ECO:0000269|PubMed:10792060 654..831 20/176 (11%)
ABC_membrane 866..1147 CDD:279056 78/292 (27%)
ABCC_CFTR2 1208..1480 CDD:213256 84/271 (31%)
Interaction with GORASP2. /evidence=ECO:0000269|PubMed:21884936 1386..1480 19/93 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1452..1480 6/27 (22%)
PDZ-binding. /evidence=ECO:0000269|PubMed:11707463, ECO:0000269|PubMed:16331976 1478..1480 394/1521 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151593
Domainoid 1 1.000 62 1.000 Domainoid score I10331
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.850

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