DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11898 and abcc12

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:XP_002937916.3 Gene:abcc12 / 100493828 XenbaseID:XB-GENE-6465370 Length:1430 Species:Xenopus tropicalis


Alignment Length:1432 Identity:428/1432 - (29%)
Similarity:699/1432 - (48%) Gaps:204/1432 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AVHEQRQPNPVTKANFFSKWFFIWTREILVKGLQ-RNLDPSDLYETEPSLESTQVS-SFLLGHWE 65
            |.|  |..:|:..|..||.....|...:..|..: ..|..:||:.. |..||::.: ..|...||
 Frog    24 ATH--RNQHPIDNAGLFSFMTLNWITPLARKAYKLSELQMNDLWSL-PFHESSETNCQRLQSLWE 85

  Fly    66 QELKR--SKPNVLRMIFKAYGWSFVPASIVYSIMAIAVHTT-----QPLMLGGLVSFFSESTGKI 123
            :||:.  .:...|.::.    |.|.....:.:.:::.:..|     ..:.:..|:.:     ...
 Frog    86 EELQNHGKRKASLSLVL----WRFCRTRSLLAFLSLIITMTASFIGPAIFIRALLEY-----ANT 141

  Fly   124 TKHS---AYLYAMGVVLCSLISGLFF--HPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSG 183
            .||.   ..:.|.|:....|:....|  |..|.|  |.|.|::.|...|.::|.|::..:.|.. 
 Frog   142 LKHDLRYGLILASGIFAAELVRSWSFALHWAMNY--RTGVRLKGAVLALAFKKMLKLKQSNDIR- 203

  Fly   184 VSGYAISLMATDLPTFNE--SFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQA 246
             :|..:::.::|.....|  |..|.  |..||:.|::.:......:|..|::|....:.|.|...
 Frog   204 -TGELLNMCSSDGQRLFEAASIGCM--LAAGPVIGIMGLVYTALFLGPSALLGSSVFIIFYPFMM 265

  Fly   247 WAARAIARYKRSSADVGDERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYIY 311
            .|::..|.:::....|.|.||:|||||:.:::.|||||||.:|...|..:|.||...:..:.|:.
 Frog   266 LASKLTAYFRKKCIVVTDRRVRLMNEILNSIKFIKMYAWENTFRNKIQDIRSEEKTFLEKAGYVQ 330

  Fly   312 AGLQCTGMISKLSLFLSLVTYVF---TGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETF 373
            :  ..:|:...:.:..|:.|:..   .|..:.:.:.|.|.:.::.:. |.|...|||:....|..
 Frog   331 S--ITSGVAPVVVVVASVCTFTLHMALGYNLNAAEAFTVVTVFNSMT-SALKMIPLAVKAASEAS 392

  Fly   374 VVANRVKDFLFQHENPADGGVHNFKEAEDNPEHGNFFGRTHKPKAEVKSITVHKLSASWDQKKQE 438
            :..:|.:......|:    .:.|.:....| :..:|.|......::|:|.|:.|...: :||::|
 Frog   393 ISISRFQKLFLMEES----DMRNNQRLLSN-DLIDFSGAYFSWSSDVRSSTLEKQKEA-EQKQEE 451

  Fly   439 KRHRH----------------------------------IEDVSFQAQDQQFVGIVGTVGAGKST 469
            .:...                                  :.:::|..|..:.:||.|:||:||::
 Frog   452 FKETQNLINGHYLFSSSESKQIVNGTNASEYIVCEHKAALININFTVQKSKLIGICGSVGSGKTS 516

  Fly   470 LLQVILGELDIISGSVEVNGVLSYAPQEPWLLRGSLRDNILFTEPYDEQRYLEVLRVCHLDRDVE 534
            |:..|||::.::.|:|.|:|.::||.|:.|:...|||:||||.|.|.|::|..||:.|.|..|:|
 Frog   517 LILSILGQMTLLEGTVTVSGRIAYAAQQAWIFNESLRENILFGEEYKEKKYQRVLKTCCLYPDIE 581

  Fly   535 QLPLGDSTRVGEGGASLSGGQKARVSLARAVYRKADIYLLDDPLSAVDSHVSKMLLDRCLNEFLS 599
            .||.||.|.:||.|.:|||||:.|:|||||:|.:..:.||||||||||..|...|..:.:...:.
 Frog   582 SLPHGDLTEIGERGTNLSGGQRQRISLARALYSERSVVLLDDPLSAVDVQVGAQLFKKAIKHGMM 646

  Fly   600 KKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHYDALKK-----LIRFRM-----SVANDVEVAK 654
            .:|.:.|||::|.|...|.:::::.|.|:.||.::.|.|     .:.|:.     |:.:||:.:.
 Frog   647 NRIVLFVTHQLQYLVECDEVLMMKNGSIAEQGTHEELMKYQGDYAVLFQSMQQVNSIKSDVQCSP 711

  Fly   655 LRAMRTD---------SVYEEPEPRKSLS------------------------------------ 674
            ::..:.|         :|.::.:.:.:||                                    
 Frog   712 MKYEQLDRQVTSSHHATVVQQSKEQGTLSELTNQEETGHFTSEDVSADHLTHKSEMVNRDFMVTD 776

  Fly   675 --------------QEEHMDRHE-------------IEQQFK-----EQQQIGSVKLQTYKEYFK 707
                          ||:..|..|             .|:|.:     |::..|||....|..|.|
 Frog   777 GQITGCKQADQYGDQEDDADEDEKGSVLGNTIIVNNNERQNRDLMEPEEKGCGSVPCPIYWVYIK 841

  Fly   708 VLGHPLVVVLILLMFVVARSSEATMDIFLSKW----------ATWEETEPNQH---EPIPEYHRT 759
            ..|..|..||..::|:....|.|..:.:||.|          .|...|..:.:   .|..|::  
 Frog   842 AAGGALFCVLNAVLFIFTTGSMAFSNWWLSYWIKQGSGNTSVVTSNVTLSSDNMSDNPDLEFY-- 904

  Fly   760 RLRMMILYTFLILCTLIFYVLRTFGFFMMTLRISLRIHDQLFQGVIRAFMHFFTLATSGRILNRF 824
                :.:|...:...|.|..:|.:.|...||:.|.::||||||.|:.:.:..|.....|||||||
 Frog   905 ----IYVYISTLAAVLGFRFIRGYVFVKSTLKASTKLHDQLFQKVLHSPLKLFDTTPLGRILNRF 965

  Fly   825 SSDVLAIDVNLPQAMMDSIEFAVNALAVLAVVSTANIWLLI---PATVVVALLYGCRCLYIGASR 886
            :.|:..:|..||..:...|:..:..|..|.::|....|.|:   |.:::..|:.....:.|   |
 Frog   966 TKDMDEVDARLPCQLEQLIQNMILVLFCLGMISFVFPWFLVSVLPLSILFFLINKVSRVLI---R 1027

  Fly   887 SLKRIETISRSPIYSHTNATFKGLATIRALN-GTKYMERDFHYYQNENTSALYLHVSINRAFAFW 950
            .|||::.||:||..||..|:..|:.||:|.| .|.::.| |....:.|....:|....:|..|..
 Frog  1028 ELKRLDNISQSPFLSHVTASLHGITTIQAYNKNTDFILR-FQKLLDINQVPCFLFSCASRWLAVR 1091

  Fly   951 TDLICVLYILAVTFSFLLFDKH--RGYYSGDVGLAITQSMKLVLMCQAGMRQTVELENMMTSVER 1013
            .|||.::.|...:...:|...|  ..|    .||||:.:::|..:.|..:|...|.|...|||||
 Frog  1092 LDLISMIVITLTSVCIVLMHGHIPPAY----AGLAISYAVQLTGLFQYTVRLVTETEARFTSVER 1152

  Fly  1014 VMEYV-NIPSEPAYETEESVNLPKHWPSGGQLDFRDLRLRYSNHGPYILKGLTFTIRGEEKIGIV 1077
            :..|: |:.||...:.:|..  ||.||..|.:.|.::.:||.:..|.:||.::|:||.:||||||
 Frog  1153 INHYIKNLESEEPLKAKEIT--PKTWPQEGAITFENVEMRYRDKLPLVLKNISFSIRPKEKIGIV 1215

  Fly  1078 GHTAAGKSSIVHALFRLAHI-NGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLRFNLDPF 1141
            |.|.:||||:...||||..: .|.::||.|..:.:||.:||.::|::|||||||.||:|.||||.
 Frog  1216 GRTGSGKSSLGMVLFRLVDLAGGSVTIDNFCINTIGLKNLRGKLSVLPQDPVLFVGSIRSNLDPL 1280

  Fly  1142 EEKTDEELWLALEAVKLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIMDEA 1206
            ...||||:|.|||...:|:.||.|...:|..:.:.|:|||:|:|||:|:||||||.:|:|::|||
 Frog  1281 NLHTDEEVWNALERTHMKQHVSKLVGKLNYEVSENGSNFSVGERQLLCMARALLRSSKVLLLDEA 1345

  Fly  1207 TANVDPETDNLIQEAIHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELLHNRHGY 1271
            ||.:|.|||.||||.:...|..||||.|||||:|::..||:||:|.|::||...|..||.|:...
 Frog  1346 TAAIDNETDALIQETVKEAFHDCTVLIIAHRLNTILHCDRIMVMDKGKIVEFEKPSVLLSNKKSR 1410

  Fly  1272 LH 1273
            .|
 Frog  1411 FH 1412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 423/1419 (30%)
ABC_membrane 92..358 CDD:294371 63/280 (23%)
ABCC_MRP_domain1 423..626 CDD:213217 82/236 (35%)
ABC_membrane 762..988 CDD:294371 70/231 (30%)
ABCC_MRP_domain2 1042..1261 CDD:213211 111/219 (51%)
abcc12XP_002937916.3 MRP_assoc_pro 27..1415 CDD:188098 426/1427 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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