DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11898 and abcc4

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:XP_002939329.2 Gene:abcc4 / 100491006 XenbaseID:XB-GENE-957302 Length:1324 Species:Xenopus tropicalis


Alignment Length:1355 Identity:478/1355 - (35%)
Similarity:771/1355 - (56%) Gaps:110/1355 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAVHEQRQPNPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGHWE 65
            |..|.:..:.||...|||.||.||.|...:.:.|.:|.|:..|:||..|...|.::...|..:||
 Frog     1 MQPVPKGSKANPSQHANFCSKIFFWWLNPLFILGHKRKLEEDDMYEVLPEDASRKLGEELQWYWE 65

  Fly    66 QELKRS-----KPNVLRMIFKAYGWSFVPASIVYSIMAIAVHTTQPLMLGGLVSFFS--ESTGKI 123
            :||:::     ||.:.:.|.:.: |.......:::....::...||:.||.::|:|.  ::....
 Frog    66 KELQKAQNEGRKPRLTKAIIRCH-WKTFSVLGLFTFFEESIRVVQPIFLGNVISYFERYDANDSA 129

  Fly   124 TKHSAYLYAMGVVLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGYA 188
            ...:||:.|..:..|:||..:..|.:..:|.|.|.::|:|...::|||.||:|..|.....:|..
 Frog   130 VLANAYINAAALSACTLILAVVHHIYFYHLLRAGMKLRVAMCHMIYRKALRLSNTAMGKTTTGQI 194

  Fly   189 ISLMATDLPTFNESFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIA 253
            ::|::.|:..|::.....|.||.|||:.:....:::..||...:.|:..::..:|||....:...
 Frog   195 VNLLSNDVNKFDQVTIFLHFLWAGPLQAIAVTVLLWMEIGPSCLAGMAVLIILMPLQLCLGKFFT 259

  Fly   254 RYKRSSADVGDERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYIYA-GLQCT 317
            ..:..:|...|.|::.|||:|:.|::|||||||:||.:|:..:||:|::.:..|:|:.| .|...
 Frog   260 SLRGKTAAFTDTRIRTMNEVISGMRIIKMYAWEQSFTELVNNIRKKEINKVLRSSYLRALNLASF 324

  Fly   318 GMISKLSLFLSLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVKDF 382
            .:.||:.||::..|||..|:::::.:||:..|.|..:..::...:|.|:....|..|...|:|:|
 Frog   325 FVASKIILFVTFTTYVLLGNVISASRVFVAVSLYSAVRLTVTLFFPSAVERASEAKVSIRRIKNF 389

  Fly   383 LFQHENPADGGVHNFKEAEDNPEHGNFFGRTHKPKAEVKSITVHKLSASWDQKKQEKRHRHIEDV 447
            |...|        .||.|.:.||...          |...:.:..::..||:..:...   ::::
 Frog   390 LLLDE--------IFKPALELPEENE----------ENLLVQIQDVTCYWDKTLEIPT---LQNI 433

  Fly   448 SFQAQDQQFVGIVGTVGAGKSTLLQVILGELDIISGSVEVNGVLSYAPQEPWLLRGSLRDNILFT 512
            |...:..:.:.::|.||||||:||..:||||....|.|::.|.::|..|:||:..|::|.||||.
 Frog   434 SCSVRPGELLAVIGPVGAGKSSLLSAVLGELPKDKGFVDIRGRIAYVSQQPWVFSGTVRSNILFG 498

  Fly   513 EPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARVSLARAVYRKADIYLLDDP 577
            :.|.:::|.:|||||.|.:|:.||..||.|.:|:.|.:|||||||||:||||||:.|||||||||
 Frog   499 KEYVQEKYDKVLRVCALKKDMLQLDDGDLTIIGDRGVTLSGGQKARVNLARAVYQDADIYLLDDP 563

  Fly   578 LSAVDSHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHYDALKKLIRF 642
            |||||:.|.:.|.::|:.:.|.||:.|||||::|.|.....:::|:.||:..:|.:..|      
 Frog   564 LSAVDAEVGRHLFEKCICQALRKKLCILVTHQLQYLSAAKQILILKEGRMVGKGTFQEL------ 622

  Fly   643 RMSVANDVEVAKLRAMRTDSVYEEPEPRKSLSQEEHMDRHEIEQQF------------------- 688
               :.:.::.|        |:.:..|..:|.|||..:.:....:.|                   
 Frog   623 ---LQSGIDFA--------SLLKSEEEEQSQSQEGQLIKSSRNRTFSQSSVWSQDSTVQSHKEGA 676

  Fly   689 --------------KEQQQIGSVKLQTYKEYFKVLGHPLVVVLILLMFVVARSSEATMDIFLSKW 739
                          :|.:..|:|..:.||:||......|::.::||:.::::.:....|.:||.|
 Frog   677 TDNLAAEPVLTAIPEESRSEGTVGFKVYKKYFTSGSSYLMLFVVLLLNILSQVTYVLQDWWLSYW 741

  Fly   740 A--------------TWEETEPNQHEPIPEYHRTRLRMMI-LYTFLILCTLIFYVLRTFGFFMMT 789
            |              |..:||           :..|.:.: :|..|.:.|:||.|||....|.:.
 Frog   742 ANEQGKLNITSGTNSTGSKTE-----------QLDLTLYLGVYAGLTVATIIFGVLRCLLVFHVL 795

  Fly   790 LRISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDVLAIDVNLPQAMMDSIEFAVNALAVLA 854
            :..:..:|:|:||.:::|.:.||.....||||||||.|:..:|..:|...:|.::..:..|.|:|
 Frog   796 VCAAQALHNQMFQSLLKAPVLFFDRNPIGRILNRFSKDIGHLDDLMPFTFLDFMQVLLQILGVIA 860

  Fly   855 VVSTANIWLLIPATVVVALLYGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATIRALNGT 919
            |......|:|||...:|.:.|..|..::..||.:||:|:.:|||::||.:::.:||.||||....
 Frog   861 VAVAVIPWILIPLLPLVIVFYFLRRYFLDTSRDIKRLESTTRSPVFSHLSSSLQGLWTIRAFKAE 925

  Fly   920 KYMERDFHYYQNENTSALYLHVSINRAFAFWTDLICVLYILAVTFSFLLFDKHRGYYSGDVGLAI 984
            |..:..|...|:.::.|.:|.::.:|..|...|.||.::::|:.|..::..::..  :|.||||:
 Frog   926 KRFQDLFDAQQDLHSEAWFLFLTTSRWLAVRLDAICAVFVIAIAFGSIILAENLD--AGQVGLAL 988

  Fly   985 TQSMKLVLMCQAGMRQTVELENMMTSVERVMEYVNIPSEPAYETEESVNLPKHWPSGGQLDFRDL 1049
            :..|.::...|.|:||:.|:||:|.|.||||||..:..|..:|::...  |..||:.|.:.|.::
 Frog   989 SYGMTIMGSFQWGVRQSAEVENLMISAERVMEYTQLEKEAEWESKNPP--PADWPNKGMITFENV 1051

  Fly  1050 RLRYSNHGPYILKGLTFTIRGEEKIGIVGHTAAGKSSIVHALFRLAHINGHISIDGFETSQLGLH 1114
            ...||..||.:|:.|...||.:||:||||.|.|||||::.||||||...|.|.||.:.||:||||
 Frog  1052 NFSYSLDGPVVLRHLNALIRPKEKVGIVGRTGAGKSSLIAALFRLAEPEGKIWIDKYLTSKLGLH 1116

  Fly  1115 DLRRRISIIPQDPVLFSGSLRFNLDPFEEKTDEELWLALEAVKLKEFVSNLKDGINCRLHDCGAN 1179
            |||:::|||||:||||:|::|.|||||:|..|||||..||.|:|||.|..|...|..:|.:.|:|
 Frog  1117 DLRKKMSIIPQEPVLFTGTMRKNLDPFDEHADEELWDVLEEVQLKEAVEELPGKIETQLSESGSN 1181

  Fly  1180 FSMGQRQLVCLARALLRQNKILIMDEATANVDPETDNLIQEAIHTKFAHCTVLTIAHRLHTVMDN 1244
            ||:|||||||||||:||:|:|||:|||||||||.||.|||:.|..|||.||||||||||:|::|:
 Frog  1182 FSVGQRQLVCLARAILRRNRILIIDEATANVDPRTDELIQKTIREKFAECTVLTIAHRLNTIIDS 1246

  Fly  1245 DRVMVVDMGRVVELGHPHELLHNRHGYLHRFVEKTGVGTAQHLRHLAEQSYRKRV 1299
            |::||:|.|||.|...|:.||.|:....::.|::.|...|..|...|:|.|.|::
 Frog  1247 DKIMVLDAGRVKEYDEPYLLLQNKESLFYKMVQQVGKAEATALNEAAKQVYLKKI 1301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 467/1314 (36%)
ABC_membrane 92..358 CDD:294371 78/268 (29%)
ABCC_MRP_domain1 423..626 CDD:213217 88/202 (44%)
ABC_membrane 762..988 CDD:294371 72/226 (32%)
ABCC_MRP_domain2 1042..1261 CDD:213211 132/218 (61%)
abcc4XP_002939329.2 PLN03130 2..1289 CDD:215595 472/1340 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24223
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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