DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11898 and tap2

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:XP_002942649.3 Gene:tap2 / 100489020 XenbaseID:XB-GENE-481680 Length:728 Species:Xenopus tropicalis


Alignment Length:647 Identity:163/647 - (25%)
Similarity:286/647 - (44%) Gaps:126/647 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   669 PRKSLSQEEHMDRHEIEQQFKEQQQIGSVKLQTYK--EYFKVLGHPLVVVLILL--MFV---VAR 726
            |.||.         |.|...|::::...::|..|.  ::..:.|..:.:.|.|:  ||:   :.|
 Frog   136 PNKSA---------EGEANSKKRERENFIRLLKYSIPDWLPLCGAFVFLTLALIGEMFIPYYMGR 191

  Fly   727 SSEATMDIFLSKWATWEETEPNQHEPIPEYHRTRLRMMILYTFLILCTLIFYVLRTFGFFMMTL- 790
                .:||.        .|..|:.|        .||.|.......:.:.||...|. |.||.:| 
 Frog   192 ----VIDIL--------STNYNERE--------FLRAMSFMAMFSITSSIFAGSRG-GLFMFSLA 235

  Fly   791 RISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDV------LAIDVNLPQAMM------DSI 843
            |::.|:...||:.||:..:.||....||.|.:|.::|.      :|.:||:...|:      .|.
 Frog   236 RLTQRLRLLLFRSVIKQEIAFFEATKSGDITSRLTNDTARVSRSIAANVNITLRMLVKCVGVYSF 300

  Fly   844 EFAVN-ALAVLAVVSTANIWLLIPATVVVALLYGCRCLYIGASRSLKRI-ETISRSPIYSHTNAT 906
            .|::: .|.:|..:|:       |.|.::..:|.    |.... .:||: ::|:||     :...
 Frog   301 MFSLSWQLTLLTFISS-------PLTWIIQKVYN----YYHQD-LVKRVQDSIARS-----SELA 348

  Fly   907 FKGLATIRALNGTKYMERDFHYYQNENTSALYLHVSINRAFAFWTDLICVLYILAVTFSFLLFDK 971
            .:.:.::|.:......|.:...|:|   |....||...|     .|.:..||:|......|....
 Frog   349 KEIIESVRNVYSFAAEEEEAKRYEN---SLQETHVLQTR-----RDFVTALYLLVTRLVNLGTQV 405

  Fly   972 HRGYY-----------SGDVGLAITQSMKLVLMCQAGMRQTVELENMMTSVERVMEYVNIPSEPA 1025
            ...||           ||.:...|...|:.....:..:....|:.:...:.|:|.:|::  .||.
 Frog   406 TMLYYGQILIRSGFISSGKMVSFILYQMESDSYIRTLVHMLSEITHAAGAAEKVFQYLD--REPQ 468

  Fly  1026 YETEESVNLPKHWPSG--------GQLDFRDLRLRYSNHGPYI--LKGLTFTIRGEEKIGIVGHT 1080
            ...           ||        |:.:|.::...|.:. |.|  |:.::||:.......:||.:
 Frog   469 VSA-----------SGCLCPGTLQGRFEFSNVTFSYPSR-PEILALQNVSFTLPPGSVTALVGPS 521

  Fly  1081 AAGKSSIVHALFRLAH-INGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLRFNLD----- 1139
            ..||::.|..|.|... ..|:|.:||....:.....|..:::::.|:||||:||:|.|:.     
 Frog   522 GGGKTTCVSLLERFYEPQGGNILLDGKPLKEYKHEYLHSKVALVAQEPVLFAGSVRENISYGLYN 586

  Fly  1140 -PFEEKTDEELWLALEAVKLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIM 1203
             |     :|:|..|....|.::|:..::...:..:.:.||..|.||:|.|.|||||.|:.|:||:
 Frog   587 IP-----EEKLKAAARKAKAEDFIEGMEKAYDTDVGNSGAQLSAGQKQRVALARALARKPKLLIL 646

  Fly  1204 DEATANVDPETDNLIQEAIHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELL 1265
            |||::.:|.||::.||:::.: ....::|.|||||.||...|:::|::.|.:||.| .||.|
 Frog   647 DEASSCLDAETEHEIQKSLQS-IEDLSLLIIAHRLRTVQKADQILVLEAGNLVEQG-THEKL 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 163/647 (25%)
ABC_membrane 92..358 CDD:294371
ABCC_MRP_domain1 423..626 CDD:213217
ABC_membrane 762..988 CDD:294371 58/251 (23%)
ABCC_MRP_domain2 1042..1261 CDD:213211 73/227 (32%)
tap2XP_002942649.3 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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