DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11898 and cftr

DIOPT Version :10

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:XP_031754831.1 Gene:cftr / 100486085 XenbaseID:XB-GENE-853972 Length:1485 Species:Xenopus tropicalis


Alignment Length:1525 Identity:401/1525 - (26%)
Similarity:716/1525 - (46%) Gaps:269/1525 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QPNPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGHWEQELKRSK- 72
            |.:|:.||:.||:.||.||:.||.||.::.|:.||:|:..|...:..:|..|...|::|:..|| 
 Frog     2 QRSPLEKASIFSQIFFSWTKPILWKGYRQRLELSDIYQIHPGDSADNLSERLEREWDREVATSKK 66

  Fly    73 -PNVLRMIFKAYGWSFVPASIVYSIMAIAVHTT---QPLMLGGLVSFFSESTGKITKHS---AYL 130
             |.::..:.:.:.|.|    :.|.|:......|   |||:||.:::.:...    .:|.   ||.
 Frog    67 NPKLINALKRCFFWKF----LFYGILLYLGEVTKAVQPLLLGRIIASYDRD----NEHERSIAYY 123

  Fly   131 YAMGVVLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGYAISLMATD 195
            .|:|:.|..::..|..||.:..|..:|.::|:|...|:|:|.|::|....:...:|..:||::.:
 Frog   124 LAIGLCLLFVVRMLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISTGQLVSLLSNN 188

  Fly   196 LPTFNESFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIARYKRSSA 260
            |..|:|.....|.:|..||:.::.:.:::.|:...|..|||.::.....|||..|.:.:|:...|
 Frog   189 LNKFDEGLALAHFVWIAPLQVLLLMGLLWDLLQASAFCGLGFLIILALFQAWLGRMMMKYRDKRA 253

  Fly   261 DVGDERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYI-YAGLQCTGMISKLS 324
            ...:||:.:.:|||..:|.:|.|.||.:..|:|..:|:.|:...|.:.|: |.............
 Frog   254 GKINERLVITSEIIENIQSVKAYCWESAMEKIIETIRETELKLTRKAAYVRYFNSSAFFFSGFFV 318

  Fly   325 LFLSLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVKDFLFQHENP 389
            :||.:|.::.. |.::.:|:|...|:...|..::...:|.|:..|.::..|.|::::||.:.|  
 Frog   319 VFLCIVPHLLL-DGISLRKIFTTISFSIVLRMAVTRQFPWAVQTWYDSLGVINKIQEFLQKEE-- 380

  Fly   390 ADGGVHNFKEAEDNPEHGNFFGRTHKPKAEVKSITVHKLSASWDQ--------KKQEKRHRHI-- 444
                   :|..|.|              .....:.:..:|||||:        .|||....:|  
 Frog   381 -------YKSLEYN--------------LTTTEVAMENVSASWDEGIGEFFEKAKQEVNGGNISN 424

  Fly   445 ED------------------VSFQAQDQQFVGIVGTVGAGKSTLLQVILGELDIISGSVEVNGVL 491
            ||                  ::|:.:..|.:.|.|:.||||::||.:|:|||:..:|.::.:|.:
 Frog   425 EDPSPFFSNFSLHVAPVLRNINFKIEKGQLLAIAGSTGAGKTSLLMMIMGELEPSAGKIKHSGRI 489

  Fly   492 SYAPQEPWLLRGSLRDNILFTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQK 556
            |::||..|::.|::::||:|...||:.|||.|::.|.|:.|:.:.|..|:|.:||||.:|||||:
 Frog   490 SFSPQVSWIMPGTIKENIIFGVSYDQYRYLSVIKACQLEEDISKFPEKDNTVLGEGGITLSGGQR 554

  Fly   557 ARVSLARAVYRKADIYLLDDPLSAVDSHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHLVL 621
            ||:|||||||:.||:||:|.|.|.:|....|.:.:.|:.:.::.|.|||||.:|:.|:..|.:::
 Frog   555 ARISLARAVYKDADLYLMDSPFSYLDLFTEKEIFESCVCKLMANKTRILVTSKVEQLKKADKVLI 619

  Fly   622 LEGGRISVQG--------------------HYDA------LKKLIRFRMSVAND----------- 649
            |..|.....|                    |::|      :.:.:| |.|:.:|           
 Frog   620 LHEGSCYFYGTFSELQDQRPEFSSHLTGFDHFNAERRNSIITETLR-RCSIDSDPTAVRNEVKNK 683

  Fly   650 --VEVAKLRAMRTDSVYEEPEPRKSLSQEEHMDRHEIEQQFKEQQQI----GSVKLQTYKE---- 704
              .:||.....|.:||.   .||||..:...|.:.:.:....|::.|    |..||....|    
 Frog   684 SFKQVADFSEKRKNSVI---NPRKSSRKFSIMQKSQPQMSGIEEEDIPPNQGERKLSLVPESEQG 745

  Fly   705 -----YFKVL-------GHPLVVVLILLMFV-VARSSEA---------------------TMDIF 735
                 ...||       |.....||.|:... |::.|.|                     .:||:
 Frog   746 EASLPRSNVLNTGPTFQGRRRQSVLNLMTRTSVSQGSNAFATRNTSVRKMSVGSFSNSSFEVDIY 810

  Fly   736 ---LSKWATWEETEPNQHEPIPEYH-------------RTRLRMMILYT----FLILCTLIF--- 777
               ||:.:..|.:|....|.:.|..             .|.:|.:..:.    .|:.|.:||   
 Frog   811 NRRLSQDSILEVSEEINEEDLKECFLDDTDSPSPTTTWNTYIRFLTAHKNFIFILVFCIVIFLAE 875

  Fly   778 ------------------------------------------------YV-----LRTFGFFM-- 787
                                                            ||     |...|.|.  
 Frog   876 VIASSAGLWIIKRNAPVSNMTSNENISEASDILSVIVTHTSFYYVFYIYVGVADSLLALGIFRGL 940

  Fly   788 ----MTLRISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDVLAIDVNLPQAMMDSIEFAVN 848
                ..:.:|..:|.::...::.|.|..|....:||||||||.|...:|..||.::.|..:..:.
 Frog   941 PLVHSLISVSRVLHKKMLHSILHAPMSTFNTMRAGRILNRFSKDTAILDDILPLSIFDFTQLVLI 1005

  Fly   849 ALAVLAVVSTANIWLLIPATVVVALLYGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATI 913
            .:..:.|||....::.:....|:|.....|..::..|:.||::|:.:||||::|...:.|||.|:
 Frog  1006 VIGAITVVSLLEPYIFLATVPVIAAFILLRSYFLHTSQQLKQLESEARSPIFAHLITSLKGLWTL 1070

  Fly   914 RALNGTKYMERDFHYYQNENTSALYLHVSINRAFAFWTDLICVLYILAVTFSFLLFDKHRGYYSG 978
            ||.....|.|..||...|.:|:..:|::|..|.|....::|.|::.:||:|..:...   |....
 Frog  1071 RAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMTIEMIFVIFFIAVSFISIATS---GAGEE 1132

  Fly   979 DVGLAITQSMKLVLMCQAGMRQTVELENMMTSVERVMEYVNIPSEP----------------AYE 1027
            .||:.:|.:|.::...|..:..:::::::|.||.|:..::::|.|.                .||
 Frog  1133 KVGIVLTLAMNIMNTLQWAVNASIDVDSLMRSVSRIFRFIDMPREELIHDNNHKDDQLSEVLIYE 1197

  Fly  1028 TEESVNLPKHWPSGGQLDFRDLRLRYSNHGPYILKGLTFTIRGEEKIGIVGHTAAGKSSIVHALF 1092
             .:.:...:.||||||:..::|..:|.:.|..:|:.::|::...:::|::|.|.:|||:::.|..
 Frog  1198 -NDYIKKNQVWPSGGQMTVKNLSAKYKDGGHTVLENISFSLNPGQRVGLLGRTGSGKSTLLSAFL 1261

  Fly  1093 RLAHINGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLRFNLDPFEEKTDEELWLALEAVK 1157
            ||....|.|.|||.....:.|...|:...::||...:|||::|.||||:.:.:||||....|.|.
 Frog  1262 RLLSTQGDIQIDGVSWQTIPLQKWRKAFGVVPQKVFIFSGTIRKNLDPYGKWSDEELLKVTEEVG 1326

  Fly  1158 LKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIMDEATANVDPETDNLIQEAI 1222
            ||..:......::..|.|.|...|.|.:|||||||::|.:.|||::||.:|::||.|..:|::.:
 Frog  1327 LKSIIDQFPGQLDFVLLDGGCVLSHGHKQLVCLARSVLSKAKILLLDEPSAHLDPITFQIIRKTL 1391

  Fly  1223 HTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELLHNRHGYLHRFVEKTGVGTAQ-- 1285
            ...||:|||:...|||..:::....:|::...|.:.....:|::.:..:      |..:..:.  
 Frog  1392 KHAFANCTVILSEHRLEAMLECQHFLVIEDNTVRQYDSIQKLMNEKSFF------KQAISQSDRL 1450

  Fly  1286 -----HLRHLAEQSYRKRVLGRKSEDQGSV 1310
                 |.|:.:::..|.::...:.|.:..|
 Frog  1451 KLFPLHRRNSSKRKSRPKISALQEETEEEV 1480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 MRP_assoc_pro 2..1268 CDD:188098 395/1474 (27%)
cftrXP_031754831.1 CFTR_protein 1..1472 CDD:273530 399/1515 (26%)

Return to query results.
Submit another query.