DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11898 and abcc2

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:XP_004915926.1 Gene:abcc2 / 100485020 XenbaseID:XB-GENE-1012796 Length:1552 Species:Xenopus tropicalis


Alignment Length:1432 Identity:448/1432 - (31%)
Similarity:709/1432 - (49%) Gaps:222/1432 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAVHEQRQPNPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGHWE 65
            :|..:|..:.||...|:|.|:..|.|...|:|||.::.|:..||:|.....::..:......|.:
 Frog   192 ISEKNESTKENPELTASFLSRITFNWYNSIVVKGYKKPLEMEDLWELNEEDKTKNMYEIFEKHMK 256

  Fly    66 QELKRSKPNV---------------LRMIFKAYG------------------------------W 85
            .:::::|.::               :..|.||..                              |
 Frog   257 HDVRKAKKDLEKRKNKRKQKESGIEMNGISKAQSQDILVMEEKKKEKKKKEKSIDGTAKDYPKRW 321

  Fly    86 ----------SFVPASIVYSIMAIAVHTTQPLMLGGLVSFFSESTGKITKH--SAYLYAMGVVLC 138
                      |.:..|.::.::...:....|.:|..:|:|    |...::|  ..:.||:.:::.
 Frog   322 LIKTLIKTFPSTLLTSAIFKLLHDLLAFVSPQILKVMVTF----TADPSQHQWQGFFYAVLLLVT 382

  Fly   139 SLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGYAISLMATDLPTFNESF 203
            :|:.......:....|.:|.|||......||:|.|.||.|.......|..::||:.|...|.:..
 Frog   383 ALLQSFLLQQYFHGCFVLGMRVRSLLMAAVYKKALTVSNAIRKESTVGETVNLMSADAQRFMDLT 447

  Fly   204 YCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIARYKRSSADVGDERVK 268
            ...|.||..||:..:.:..:::.:|...:.|||.::..||:.|..|....:.:..:....|:|:|
 Frog   448 NFIHLLWSSPLQIAISIVFLWEELGPSVLAGLGVMILLIPINAVLATVSRKLQMKNMKNKDKRMK 512

  Fly   269 LMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYIYAGLQCTGMISKLSLF------- 326
            :||||:..::::|:||||.||...:.::|::|:..:...||:::          :|||       
 Frog   513 IMNEILNGIKILKLYAWEPSFENQVQEIREKELKDMLHFTYLHS----------VSLFVFTCAPF 567

  Fly   327 -LSLVTY-----VFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVKDFLFQ 385
             :|:.|:     |...:::.::|.|...|.::.|...|. ..|:.|:..|:|.|.:.|::.:|  
 Frog   568 LVSVATFAVYVAVDPSNVLNAEKAFTSISLFNILRFPLA-MLPMLISSMVQTSVSSARLEKYL-- 629

  Fly   386 HENPADGGVHNFKEAEDNPEHGNFFGRTHKPKAEVK---SITVHKLSASWDQKKQEKRHRHIEDV 447
                  ||        ||.:       |...:.:..   ::.....:.||    :|..:..:.:|
 Frog   630 ------GG--------DNLD-------TSAIRCDPNIDAAVQFSDATFSW----EEDANPAVNNV 669

  Fly   448 SFQAQDQQFVGIVGTVGAGKSTLLQVILGELDIISGSVEVNGVLSYAPQEPWLLRGSLRDNILFT 512
            :...::...|.:||.||:|||:|:..:|||:|.:.|.:.:.|.::|.||:.|:...:|::||||.
 Frog   670 NLDIKEGNLVAVVGGVGSGKSSLVSAMLGEMDHVGGYINIKGSIAYVPQQAWIQNATLKNNILFG 734

  Fly   513 EPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARVSLARAVYRKADIYLLDDP 577
            ...||:||.:||..|.|..|:|.||..|.:.:||.|.:||||||.|||||||||..||||:||||
 Frog   735 SKMDEERYQKVLEACALLPDLEMLPGHDESEIGEKGINLSGGQKQRVSLARAVYNDADIYILDDP 799

  Fly   578 LSAVDSHVSKMLLDRCL--NEFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHYDALKKLI 640
            |||||:||.|.:.::.:  |..|..|.||||||.|..|:|.|.:|:|...|::..|.|..|:   
 Frog   800 LSAVDAHVGKHIFEKVVGPNGLLKNKTRILVTHGVSFLKHADDIVVLVNSRVTETGSYKTLQ--- 861

  Fly   641 RFRMSVAND---VEVAKLRAMRTDSVYEEPEPRKSLSQEEHMDRHEIEQQF-------------- 688
                  ||:   .|..:|.|.:.|....|.........|:..|:.|..:..              
 Frog   862 ------ANNGAFAEFLRLYAKQNDQTDNEATVFTGEDDEDDGDQVETAEVIEDIVASTVKRENSM 920

  Fly   689 ----------------------------------------KEQQQIGSVKLQTYKEYFKVLGHPL 713
                                                    ||..:.|.||.:.|.:|.:.:|...
 Frog   921 RQRKRSSVSMNGTLRRSVKDVTKKKTGIGSNDTKGQKLIEKETVETGKVKFKLYLKYLRAVGWGF 985

  Fly   714 VVVLILLMFVVARSSEATMDIFLSKWATWEETEPNQHEPIPEYHRTRLRMMILYTF--LILCTLI 776
             ...|.:.:::..::....:|:||.|....|...|...|..:      |.|.:..|  |.:...:
 Frog   986 -SFWIFVSYILQNAAFVGQNIWLSDWTGDAEKYYNITYPASQ------RDMRVGVFGALGVAQAL 1043

  Fly   777 FYVLRTFGFFMMT---LRISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDVLAIDVNLPQA 838
            |.:|   |.|:::   :|.|..:|.||...::|..|.||....:|||:|||:.|:|.:|..:|.:
 Frog  1044 FVLL---GAFLVSGGAVRASRMLHTQLLHNILRVPMRFFDTTPTGRIVNRFAKDILTVDETIPMS 1105

  Fly   839 MMDSIEFAVNALAVLAVVSTANIWLLIPATVVVAL---LYGCRCLYIGASRSLKRIETISRSPIY 900
            ....|...:..:..|.::..|.   .|.|.|:|.|   .|..:..|:..||.|:|:::::|||||
 Frog  1106 FRSWIACFLGVIGTLFIICLAT---PIFAAVIVPLAIFYYFVQRFYVTTSRQLRRLDSVTRSPIY 1167

  Fly   901 SHTNATFKGLATIRALNGTKYMERDFHYYQNENT-----SALYLHVSINRAFAFWTDLICVLYIL 960
            ||...|..||:.|||     |..:|.....||:|     .::|..:..||..|...:.:   ..|
 Frog  1168 SHFGETVSGLSVIRA-----YGHQDRFLQHNEDTIDNNQKSVYSWIVSNRWLAIRLEFV---GNL 1224

  Fly   961 AVTFSFLLFDKHRGYY-SGDVGLAITQSMKLVLMCQAGMRQTVELENMMTSVERVMEYVNIPSEP 1024
            .|.|:.|.....||.. ||.|||:|:.::.:.......:|.|.|||..:.:||||.||:.:..|.
 Frog  1225 TVFFAALFAVLGRGTVDSGTVGLSISSALNITQTLNWLVRMTSELETNIVAVERVDEYIKVEREA 1289

  Fly  1025 AYETEESVNLPKHWPSGGQLDFRDLRLRYSNHGPYILKGLTFTIRGEEKIGIVGHTAAGKSSIVH 1089
            .:  .|....||.||..|.:.|.|.::||......:|:|::.||...||:||||.|.|||||:.:
 Frog  1290 QW--VEDHRPPKDWPEKGVVQFVDYKVRYRPELDLVLQGISCTINSMEKVGIVGRTGAGKSSLTN 1352

  Fly  1090 ALFRLAH-INGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLRFNLDPFEEKTDEELWLAL 1153
            .:||:.. ..|.|.|||.:.:.:||||||::::|||||||||||:||.|||||.:.|||::|.||
 Frog  1353 CIFRIIESAGGKIMIDGLDIASIGLHDLRQKLTIIPQDPVLFSGNLRMNLDPFNQYTDEDIWKAL 1417

  Fly  1154 EAVKLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIMDEATANVDPETDNLI 1218
            |...||.||..|::.:...:.:.|.|.|:||||||||||||||::||||:|||||.||.||||||
 Frog  1418 ELSHLKPFVEGLQEKLFHEVSEGGENLSVGQRQLVCLARALLRKSKILILDEATAAVDLETDNLI 1482

  Fly  1219 QEAIHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELLHNRHGYLHRFVEKTGVGT 1283
            |..|.::||.||||||||||||:||:.|:||:|.|:::|.|.|.||| .|.|:.....:..|:.:
 Frog  1483 QRTIRSEFADCTVLTIAHRLHTIMDSSRLMVLDAGKIIEFGSPDELL-QRQGHFFSMAKDAGIDS 1546

  Fly  1284 AQ 1285
            .|
 Frog  1547 TQ 1548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 442/1405 (31%)
ABC_membrane 92..358 CDD:294371 67/280 (24%)
ABCC_MRP_domain1 423..626 CDD:213217 90/204 (44%)
ABC_membrane 762..988 CDD:294371 75/239 (31%)
ABCC_MRP_domain2 1042..1261 CDD:213211 123/219 (56%)
abcc2XP_004915926.1 MRP_assoc_pro 10..1544 CDD:188098 446/1426 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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