DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11898 and abcc10

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_001135594.1 Gene:abcc10 / 100216149 XenbaseID:XB-GENE-6465377 Length:1501 Species:Xenopus tropicalis


Alignment Length:1351 Identity:439/1351 - (32%)
Similarity:694/1351 - (51%) Gaps:154/1351 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QRQPNPVTKANFFSKWFFIWTREILVKGLQRNL-DPSDLYETEPSLESTQVSSFLLGHWEQELKR 70
            :||.......::.|::|::|...:|.:|.:..| .|.|:......|.:.::..    |::   .:
 Frog   219 ERQHPAEDGESWLSRFFYLWLNPLLRQGARGGLKHPGDVLLLPHCLGTARICQ----HFQ---SK 276

  Fly    71 SKPNVLRM---IFKAYGWSFVPASIVYSIMAIAVHTTQPLMLGGLVSFFSESTGKITKHSAYLYA 132
            |...:||:   :..::|..:....:: .:.|:.:....||:|..||:|...:...::  ...||.
 Frog   277 SSSTILRLLPTLHASFGARYYALGLL-KLGAVTLAFLGPLLLNLLVNFMEAADEPLS--WGILYT 338

  Fly   133 MGV----VLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVS-GYAISLM 192
            :|:    .|.:|:...|.|...|.:..|.:.|..:    ||||.:| .|....:|.| |..::.|
 Frog   339 LGLFSSCFLAALLQNQFTHEVNKLILAVRASVLTS----VYRKAIR-GVGTGLAGFSKGEIVNFM 398

  Fly   193 ATDLPTFNESFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIARYKR 257
            :||....:.....|||:|..||:..|.:|::|..:|...:.|||..|..:|:....|..|..|..
 Frog   399 STDADRISNFCRSFHEVWSLPLQFSVTLYLLYLQVGIAFLGGLGLAVLLLPINKVIANRIVDYNS 463

  Fly   258 SSADVGDERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRG-------STYIYAGLQ 315
            ...:..|.|||||.|:::.|:::|.|.|||.||:.:..:|::|:.|:|.       ..|::|.|.
 Frog   464 DLLNHKDARVKLMTELLSGMRVVKFYTWEKHFAEAVTSLREKELRSLRALKMLDAVCVYLWAALP 528

  Fly   316 CTGMISKLSLFLSLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVK 380
            .  :||    .::.:|||..|..:|:.|||...:....| ...|:::|..:|..:|..|...|::
 Frog   529 V--LIS----IITFITYVLLGHQLTAAKVFTALALVGML-ILPLNNFPWVLNGVLEAKVSLERIQ 586

  Fly   381 DFLFQHENPADGGVHNFKEAEDNPEHG--NFFGRTHKPKAEVKS-ITVHKLSASWDQKKQE---K 439
            .|:                  |.||..  |::  :.:|.|:..| :.:...:.||..::.|   .
 Frog   587 LFM------------------DLPEQDLLNYY--SQEPPADPSSALELRSAAFSWMPEESEDSGS 631

  Fly   440 RHRHIEDVSFQAQDQQFVGIVGTVGAGKSTLLQVILGEL-----DIISGSVEVNGVLSYAPQEPW 499
            ....||.:|  .|....||:||.||.|||:||..:.|||     ::.:...|:.  ..:|.||||
 Frog   632 LQLFIEHLS--VQKGVLVGVVGKVGCGKSSLLAALTGELSRSGGELFASHQELG--FGFAAQEPW 692

  Fly   500 LLRGSLRDNILFTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARVSLARA 564
            :...::|:||||.:.::.:.|..||..|.|:.|:..||.||.|.|||.|.:||||||||::||||
 Frog   693 IQFATIRENILFGKEFNGKLYQGVLEACALNDDLSILPSGDQTEVGENGVTLSGGQKARLALARA 757

  Fly   565 VYRKADIYLLDDPLSAVDSHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISV 629
            ||:..|||||||||:|||:.|:..|:::|:...|..|.|||.|||.:||...|.::|:|||::..
 Frog   758 VYQDKDIYLLDDPLAAVDADVAAHLMEKCILGILKNKTRILCTHRTELLDKADIVLLMEGGKMVG 822

  Fly   630 QGHYDALKKLIRFRMSVANDVEVAKLRAMR--TDSVYEEPEPRKSLSQEEHMDRHE-------IE 685
            .|..|.:..|          ||.::.|..|  |...:......:||.::|....:|       ..
 Frog   823 SGTPDKILPL----------VESSRNRGSRGQTQMNHISQAAEQSLEEDEEEAENEGNPIQPITA 877

  Fly   686 QQFKEQQQIGSVKLQTYKEYFKVLGHPLVVVLILLMFVVARSSEATMDIFLSKWATWEETEPNQ- 749
            :..:|::|.|:|.||.|..|:|.:|..|...::|.:|:: ::|....|.:||.|.:..:..|.. 
 Frog   878 EVGQEEKQEGAVALQVYWAYWKAVGGCLAGSVLLALFLM-QASRNISDWWLSHWISSLQDSPRNV 941

  Fly   750 -----------------------HEPIPEYHRTRLRMMILYTF-------LILCTLIFYVLRTFG 784
                                   ..||...|.......:..||       :.:...||..||.|.
 Frog   942 SLTNLTPSSFPSASLLLFSQGGLVSPISSVHSAEKNSSLDITFYLSVYGGIAVANSIFTALRAFL 1006

  Fly   785 FFMMTLRISLRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDVLAIDVNLPQAMMDSIEFAVNA 849
            |.:.|:..::.||.:|...|::|.:.||.....|||:||||||:..:|.:||..:...:.|....
 Frog  1007 FALGTVHAAVVIHRRLLSSVLQATVSFFDSTPIGRIINRFSSDLYCVDDSLPFVLNIFLAFTFGL 1071

  Fly   850 LAVLAVVSTANIWLLIPATVVVALL-YGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATI 913
            |.:|.::|....|:| |..:.:.|| |..:..|..:||.|||:::|:.||||:|.:.|..||.||
 Frog  1072 LGMLVMISYGLPWIL-PVLLPLCLLYYYLQRFYRHSSRELKRLQSITLSPIYTHFSETLTGLTTI 1135

  Fly   914 RALNGTKYMERDFHYYQNENTSALYLHVSINRAFAF-------WTD----LICVLYILAVTFSFL 967
            ||   |::.:|    ::.|..|.|    .:|:...|       |.|    :|.|:.:.|::...:
 Frog  1136 RA---TRHADR----FEAECVSRL----EVNQRCMFASNAAVQWLDIRLQMIGVMVVAAISVIAI 1189

  Fly   968 LFDKHRGYYSGDVGLAITQSMKLVLMCQAGMRQTVELENMMTSVERVMEY-VNIPSEPAYETEES 1031
            :..:.:....|.||||::.::.:..:....:....:.|.||.||||..|| ..:|||.|   |.|
 Frog  1190 IQHQRKSGDPGLVGLALSYALSITGILSGLISSFTQTEAMMVSVERTEEYSTTLPSESA---EGS 1251

  Fly  1032 VNLPKHWPSGGQLDFRDLRLRYSNHGPYILKGLTFTIRGEEKIGIVGHTAAGKSSIVHALFRLAH 1096
            :.:...||:.|.::||::.|.|....|..|.|::|||...|||||||.|.:|||::..||||:..
 Frog  1252 LQVELDWPTNGHIEFRNVVLCYRLGLPNALDGISFTISPGEKIGIVGRTGSGKSTLFLALFRMME 1316

  Fly  1097 I-NGHISIDGFETSQLGLHDLRRRISIIPQDPVLFSGSLRFNLDPFEEKTDEELWLALEAVKLKE 1160
            : .|.|.||...:..|.|..||.|::|||||..|||||:|.||||....||.|:...|:...|::
 Frog  1317 LKEGSILIDNVPSHLLNLELLRSRLAIIPQDAFLFSGSVRVNLDPLSYHTDVEILKVLDQCHLQD 1381

  Fly  1161 FVSNLKDGINCRLHDCGANFSMGQRQLVCLARALLRQNKILIMDEATANVDPETDNLIQEAIHTK 1225
            .|..: .|::..:.|.|.|||:|||||:|||||||...|||.:|||||:||.:||.|:|..|..:
 Frog  1382 VVRRI-GGLDADVGDRGKNFSLGQRQLLCLARALLTHAKILCIDEATASVDHQTDELLQRTIRER 1445

  Fly  1226 FAHCTVLTIAHRLHTVMDNDRVMVVDMGRVVELGHPHELLHNRHGYLHRFV 1276
            |...|||||||||:|:||:|||:|:..|::|||..|..|........:|.:
 Frog  1446 FRERTVLTIAHRLNTIMDSDRVLVMHAGKLVELDSPANLSKREDSNFYRLI 1496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 437/1339 (33%)
ABC_membrane 92..358 CDD:294371 80/277 (29%)
ABCC_MRP_domain1 423..626 CDD:213217 90/210 (43%)
ABC_membrane 762..988 CDD:294371 74/244 (30%)
ABCC_MRP_domain2 1042..1261 CDD:213211 110/219 (50%)
abcc10NP_001135594.1 MRP_assoc_pro 180..1484 CDD:188098 437/1337 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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