DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11898 and abcc3

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_001107301.1 Gene:abcc3 / 100135090 XenbaseID:XB-GENE-1003737 Length:1531 Species:Xenopus tropicalis


Alignment Length:1375 Identity:426/1375 - (30%)
Similarity:690/1375 - (50%) Gaps:168/1375 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAVHEQRQPNPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGHWEQ 66
            |.|.::..|.|.:.|.|.|:..|.|..::.:.|.:|.|:..||:.......|..|.:.|:..||:
 Frog   198 SPVRDEINPCPESDAGFLSRLTFWWFTKMAILGYKRPLEDKDLWSLNEDDTSNVVVTNLIKEWEK 262

  Fly    67 E------------------------------------LKRSKPNVLRMIFKAYGWSFVPASIVYS 95
            |                                    .|..:|:.|:::.:.:|..|:..|. :.
 Frog   263 EKSNLAQMQVSYSKKPEAVLNHTDEKAYESDVLIVDNKKPKEPSFLKVLLRTFGPYFLIGSF-FK 326

  Fly    96 IMAIAVHTTQPLMLGGLVSFFSESTGKITKHSAYLYAMGVVLCSLISGLFFHPFMKYLFRVGSRV 160
            :....:....|.:|..|::|......  .....:..|:.:.|.||:..|..|...:|.|..|.|:
 Frog   327 LFQDLLSFVNPQLLSILITFIKNKDA--PSWWGFCIAVLMFLTSLVQTLILHQHFQYCFVTGMRL 389

  Fly   161 RLACAGLVYRKFLRVSVAADNSGVSGYAISLMATDLPTFNESFYCFHELWRGPLEGVVFVYIIYQ 225
            |.|..|::|||.|.::.:|..|...|..::||:.|...|.:.....:.||..||:..:.:|.::|
 Frog   390 RSAITGIIYRKSLVITNSAKRSSTVGEVVNLMSVDAQRFQDLTTFLNMLWSAPLQICLALYFLWQ 454

  Fly   226 LIGWPAVVGLGTIVAFIPLQAWAARAIARYKRSSADVGDERVKLMNEIIAAMQLIKMYAWEKSFA 290
            .:|...:.|:..:|..||:.|:.|.....::.......|.|:||||||:..::::|:||||.|||
 Frog   455 ALGPSVLAGVAVMVLLIPINAFIAMKTRAFQVEQMQYKDSRIKLMNEILNGIKVLKLYAWEPSFA 519

  Fly   291 KLIGKVRKEEMDSIRGSTYI-----YAGLQCTGMISKLSLFLSLVTYVFTGDIVTSQKVFIVASY 350
            :.:.::|.:|::.::.:.|:     :|......::: |:.|...|| |...:|:.::|.|:..|.
 Frog   520 QKVLEIRNKELNILKKAAYLNALSTFAWTSAPFLVA-LTTFAVYVT-VDEKNILDAEKAFVSLSL 582

  Fly   351 YDHLNDSLLHSWPLAINMWVETFVVANRVKDFLFQHENPADGGVHNFKEAEDNPEHGNFFGRTHK 415
            ::.|... |:..|..|:...:..|...|:::||...|...:.      ..:|....||       
 Frog   583 FNILRFP-LNMLPQVISNLAQASVSIKRIQNFLANDELDLNA------VTKDKTLPGN------- 633

  Fly   416 PKAEVKSITVHKLSASWDQKKQEKRHRHIEDVSFQAQDQQFVGIVGTVGAGKSTLLQVILGELDI 480
                  :||||..:.||    .:.....:::::........|.:||.||.|||:|:..:|||::.
 Frog   634 ------AITVHNGTFSW----AKNGGAILQNINLLVPSGSLVAVVGQVGCGKSSLVSALLGEMEK 688

  Fly   481 ISGSVEVNGVLSYAPQEPWLLRGSLRDNILFTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVG 545
            ..|.|.|.|.::|.||:.|:...:|:|||||....:|:.|.:||..|.|..|:|.||.||.|.:|
 Frog   689 EEGEVSVRGSVAYVPQQAWIQNCTLKDNILFGRAANEKNYKKVLEACALVTDLEVLPGGDQTEIG 753

  Fly   546 EGGASLSGGQKARVSLARAVYRKADIYLLDDPLSAVDSHVSKMLLDRCL--NEFLSKKIRILVTH 608
            |.|.:||||||.||||||||:..||:|||||||||||:||:|.:.|..:  :..|..|.|:||||
 Frog   754 EKGINLSGGQKQRVSLARAVFSNADVYLLDDPLSAVDAHVAKHIFDNVIGPDGLLRGKTRVLVTH 818

  Fly   609 RVQLLRHVDHLVLLEGGRISVQGHYDALKK----LIRFRMSVANDVEV----------------- 652
            .:..|..|||:|:|..||::..|.|..|.|    ...|..:.|.|.||                 
 Frog   819 GISFLPQVDHIVVLVDGRVTEMGSYQELLKQNGAFSEFLRNYAFDDEVEEEDITIPDEEEVLLAE 883

  Fly   653 ------------------AKLRAMRTDSVYEEPEPRKSLSQEEHMDRHEIEQQFKEQQ------- 692
                              |:.:.:|..|:..:.||..::|........:..:....:|       
 Frog   884 ETLSTHTDLADNEPVANEARKKFIRQISILSDGEPSHAMSTRRRFTEKKPSENLVAKQPPTEKLI 948

  Fly   693 -----QIGSVKLQTYKEYFKVLGHPLVVVLILLMFVVARSSEATM--DIFLSKWATWEETEPNQH 750
                 :.|.||:..:.:|.|.:|   :.:.:.:.|:.:..:.|.:  :::||.|.         :
 Frog   949 QTETTETGRVKMTVFWQYMKAVG---LAISVFICFLYSCQNAAAIGANVWLSDWT---------N 1001

  Fly   751 EPIPEYHRTRLRMMI-LYTFLILCTLIFYVLRTFGFFMMTLRISLRIHDQLFQGVIRAFMHFFTL 814
            ||:....:...:|.: :|..|.:...:..:..:|...:..:..:.::|..|....:.....|:..
 Frog  1002 EPVINQTQQNTQMRVGVYAALGILQGLLVMTSSFSLAIAGIGAARKLHSALLDNKMHTPQSFYDT 1066

  Fly   815 ATSGRILNRFSSDVLAIDVNLP-QAMMDSIEFAVNALAVLAVVSTANIWLLIPATVVVALLYGCR 878
            ...|||:||||.|:..||..:| ..:|....|..:...::.:|::..::.::...:.:|.::..|
 Frog  1067 TPIGRIINRFSKDIYVIDEVIPGTILMFLATFFTSLSTMIVIVASTPLFAVVIIPLAIAYIFVQR 1131

  Fly   879 CLYIGASRSLKRIETISRSPIYSHTNATFKGLATIRA---------LNGTKYMERDFHYYQNENT 934
             .|:..||.|||:|::||||||||.:.|..|.:.|||         |:..|.         :||.
 Frog  1132 -FYVATSRQLKRLESVSRSPIYSHFSETITGASIIRAYGRQNSFIVLSDNKV---------DENQ 1186

  Fly   935 SALYLHVSINRAFAFWTDLI--CVLYILAVTFSFLLFDKHRGYYS-GDVGLAITQSMKLVLMCQA 996
            .:.|..:..||......:.:  ||: :.|..|:.|    .|.:.| |.|||:::.::::.:....
 Frog  1187 KSYYPGIVSNRWLGVRVEFVGNCVV-LFAALFAVL----GREHLSPGLVGLSVSYALQVTMSLNW 1246

  Fly   997 GMRQTVELENMMTSVERVMEYVNIPSEPAYETEESVNLPKHWPSGGQLDFRDLRLRYSNHGPYIL 1061
            .:|.|.:||..:.:||||.||....:|..:..|:: ..|:.|||.|:::..:..:||......:|
 Frog  1247 MVRMTSDLETNIVAVERVKEYAENETEAPWHIEDT-KPPEDWPSKGEVELSNYSVRYRAGLDLVL 1310

  Fly  1062 KGLTFTIRGEEKIGIVGHTAAGKSSIVHALFR-LAHINGHISIDGFETSQLGLHDLRRRISIIPQ 1125
            |.|...:.|.||:||||.|.|||||:...||| |....|.:.||....|::||.|||.|::||||
 Frog  1311 KNLNLKVNGGEKVGIVGRTGAGKSSMTLCLFRILEPAEGIVKIDNVNISEIGLQDLRSRLTIIPQ 1375

  Fly  1126 DPVLFSGSLRFNLDPFEEKTDEELWLALEAVKLKEFVSNLKDGINCRLHDCGANFSMGQRQLVCL 1190
            |||||||:||.|||||.:.:|:|:|.|||...||:||:.....:.....:.|.|.|:||||||||
 Frog  1376 DPVLFSGTLRMNLDPFNKYSDDEIWKALELSNLKKFVAGQPSQLEYECSEGGENLSVGQRQLVCL 1440

  Fly  1191 ARALLRQNKILIMDEATANVDPETDNLIQEAIHTKFAHCTVLTIAHRLHTVMDNDRVMVVDMGRV 1255
            ||||||:.:|||:|||||.:|.|||:|||..|.|:|..||||||||||:|:||..||:|:|.||:
 Frog  1441 ARALLRKTRILILDEATAAIDLETDDLIQMTIRTQFEDCTVLTIAHRLNTIMDYTRVLVLDKGRI 1505

  Fly  1256 VELGHPHELL 1265
            .|...|..|:
 Frog  1506 AEFDTPTNLI 1515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 424/1368 (31%)
ABC_membrane 92..358 CDD:294371 71/270 (26%)
ABCC_MRP_domain1 423..626 CDD:213217 92/204 (45%)
ABC_membrane 762..988 CDD:294371 61/239 (26%)
ABCC_MRP_domain2 1042..1261 CDD:213211 116/219 (53%)
abcc3NP_001107301.1 MRP_assoc_pro 7..1530 CDD:188098 426/1375 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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