DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11898 and abcc5

DIOPT Version :9

Sequence 1:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster
Sequence 2:XP_012818083.1 Gene:abcc5 / 100125060 XenbaseID:XB-GENE-986260 Length:1437 Species:Xenopus tropicalis


Alignment Length:1384 Identity:434/1384 - (31%)
Similarity:688/1384 - (49%) Gaps:183/1384 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RQPNPVTKANFFSKWFFIW----TREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGH-WEQE 67
            :..:||..|..||...|.|    .|....||   .|...|::..... ||:.::|..|.. |.:|
 Frog    97 KHQHPVDNAGLFSFMTFSWLTPMARIAYKKG---ELFFEDIWPLSKH-ESSDINSKRLEKLWLEE 157

  Fly    68 L--KRSKPNVLRMIFKAYGWSFVPASIVYSIMAIAVHTTQPLMLGGLVSFFS---------ESTG 121
            :  |.:..:.||.:.    |.|....::.|||.        |||..|..|..         |.|.
 Frog   158 VTEKGADESSLRSVV----WHFCRTRLIISIMC--------LMLTQLAGFIGPAFVVKSLLEYTQ 210

  Fly   122 KITKHSAY--LYAMGVVLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGV 184
            :.:|...|  |....:::..::............:|.|||:|.|...:.::|.|::....:.|  
 Frog   211 QSSKDPGYSLLLVFALLMTEIVRSWSLALTWALNYRTGSRLRGAVLTMAFKKILKLKNIKEKS-- 273

  Fly   185 SGYAISLMATDLPTFNESFYCFHELWRGPLEGVVFVYIIYQLI--GWPAVVGLGTIVAFIPLQAW 247
            .|..|::.::|.....|:......|..||:  |..:.:||.:|  |....:|....:.|.|...:
 Frog   274 MGELINVCSSDGQRMFEAAAVGSLLAGGPI--VAILGMIYNVIILGPTGFLGSAVFILFYPAMMF 336

  Fly   248 AARAIARYKRSSADVGDERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTY--- 309
            .:|..|.::|....|.||||:.|||::..::.||||||.|:|::.:.|:|:.|...:..:.|   
 Frog   337 VSRLTAYFRRKCVSVTDERVQKMNEVLNYIKFIKMYAWVKAFSQNVQKIRENERSILERAGYFQS 401

  Fly   310 IYAGLQCTGMISKLSLFLSLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFV 374
            |..|:  ..::..::..|:...::..|..:|:.:.|.|.:.::.:..:|..: |.::....|..|
 Frog   402 ITVGI--APIVVVIASVLTFSVHMILGYDLTAAQAFTVVTVFNSMTFALKVT-PFSVKSLSEASV 463

  Fly   375 VANRVKDFLFQHENPADGGVHNFKEAEDNPEHGNFFGRTHKPKAEVKSITV-------------- 425
            ..:|.|......|      ||..|:...:|   |..       .|:|:.|:              
 Frog   464 SMDRFKSLFLMEE------VHMVKKKPSSP---NLI-------IELKNATLAWDTTYASTQCSPK 512

  Fly   426 --------------------HKLSASWDQKKQEKRHRHIEDVSFQAQDQQ--------------- 455
                                |::..|.....::|.|..|:.....:.|::               
 Frog   513 GTPKLKKGKKGVKGKKEKCSHEIEGSQAVLAEQKGHLLIDSDEHPSPDEETKELPVINVKLQRAL 577

  Fly   456 -----------FVGIVGTVGAGKSTLLQVILGELDIISGSVEVNGVLSYAPQEPWLLRGSLRDNI 509
                       .:||.|:||:||::|:..|||::.::.||:.|:|..:|..|:.|:|..:|||||
 Frog   578 YSIDLDIEKGKLIGICGSVGSGKTSLISAILGQMTLLEGSIAVSGSFAYVAQQAWILNATLRDNI 642

  Fly   510 LFTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARVSLARAVYRKADIYLL 574
            ||.:.:||:.|..||.||.|..|:..||.||.|.:||.||:|||||:.|:|||||:|....||:|
 Frog   643 LFGKEFDEEEYNAVLNVCCLRPDLAILPNGDLTEIGERGANLSGGQRQRISLARALYSDRSIYIL 707

  Fly   575 DDPLSAVDSHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHYDALKKL 639
            ||||||:|:||...:.:..:.:.|..|..:.:||::|.|...|.::.::.|.|:.:|.::.|.||
 Frog   708 DDPLSALDAHVGNHIFNSAIRKHLKSKTILFITHQLQYLVDCDDVIYMKEGCITERGTHEDLIKL 772

  Fly   640 --------IRFRMSVANDVEVAKLRAMRTDSV---YEEPEPRKSLSQEEHMDRHEIEQQFKEQQQ 693
                    ..|::..|..:|...|:....:|:   .|:.....|:.:|:.:.:.|.:....|::.
 Frog   773 NGEYAAIFNNFQLGDAPHIEQMNLKKNLKNSLKKPLEKGNKAGSVKKEKTVKKEEGQLMQLEEKG 837

  Fly   694 IGSVKLQTYKEYFKVLGHPLVVVLILLMFVVARSSEATMDIFLSKW----------ATWEET--- 745
            .|||....|..|.:..|.|...::|:.:||:...|.|..:.:||.|          ....||   
 Frog   838 KGSVPWSVYGAYIQSAGGPFAFLIIMTLFVLNVGSTAFSNWWLSYWIKQGSGNTTVVVHNETVVS 902

  Fly   746 ---EPNQHEPIPEYHRTRLRMMILYTFLILCTLIFYVLRTFGFFMMTLRISLRIHDQLFQGVIRA 807
               :.|.|.         |....:|...::..|:...:|...|...|||.|.|:||:||:.::|:
 Frog   903 NSMKDNPHV---------LFYTAIYALSMVVMLLLKAVRGIVFVKGTLRASSRLHDELFRRILRS 958

  Fly   808 FMHFFTLATSGRILNRFSSDVLAIDVNLP-QAMMDSIEFAVNALAV---LAVVSTANIWLLI--- 865
            .|.||....:||:|||||.|:..:||.|| ||.|    |..|.:.|   |.|:|....|.|:   
 Frog   959 PMKFFDTTPTGRVLNRFSKDMDEVDVRLPFQAEM----FVQNVILVFFCLGVISFVFPWFLVAVG 1019

  Fly   866 PATVVVALLYGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATIRALN-GTKYMERDFHYY 929
            |..|:..:|:....::|   |.|||:|.|::||..||..::.:||.||.|.: |.:::.|    |
 Frog  1020 PLVVLFTILHVVSRVFI---RELKRLENITQSPFLSHITSSIQGLTTIHAYSKGNEFLLR----Y 1077

  Fly   930 Q---NENTSALYLHVSINRAFAFWTDLICVLYILAVTFSFLLFDKHRGYYSGDVGLAITQSMKLV 991
            |   :.|.:..||.....|..|...|:|.|  .|..|...::...|........|||::.:::|.
 Frog  1078 QELLDNNQAPFYLFNCAMRWLAIRLDVISV--SLITTTGLMIVLMHGNISPAYAGLAMSYAVQLT 1140

  Fly   992 LMCQAGMRQTVELENMMTSVERVMEYVNIPSEPAYETEESVNLPKHWPSGGQLDFRDLRLRYSNH 1056
            .:.|..:|...|.|...|||||:..|:...:..|....::...|..||..|::.|.:..:||..:
 Frog  1141 GLFQFTVRLASETEARFTSVERINHYIKTLALEAPARIKNKAPPADWPQEGEIKFENAEMRYREN 1205

  Fly  1057 GPYILKGLTFTIRGEEKIGIVGHTAAGKSSIVHALFRLAHINGH-ISIDGFETSQLGLHDLRRRI 1120
            .|.:||.::|||:.:|||||||.|.:||:|:..|||||..::|. |.|||.:.|.:||.|||.::
 Frog  1206 LPLVLKKVSFTIKPKEKIGIVGRTGSGKTSLGMALFRLVELSGGCIKIDGVKISDIGLADLRSKL 1270

  Fly  1121 SIIPQDPVLFSGSLRFNLDPFEEKTDEELWLALEAVKLKEFVSNLKDGINCRLHDCGANFSMGQR 1185
            |||||:||||||::|.|||||.:.::|::|.|||...:||.|:.|...:...:.:.|.|||:|:|
 Frog  1271 SIIPQEPVLFSGTVRSNLDPFSQYSEEQIWDALERTHMKECVAQLPLKLETEVLENGENFSVGER 1335

  Fly  1186 QLVCLARALLRQNKILIMDEATANVDPETDNLIQEAIHTKFAHCTVLTIAHRLHTVMDNDRVMVV 1250
            ||:|:||.|||:.||||:|||||.:|.|||.||||.|...||.||:||||||||||:..||:||:
 Frog  1336 QLMCIARVLLRRCKILILDEATAAMDTETDLLIQETIREAFAECTMLTIAHRLHTVLSCDRIMVL 1400

  Fly  1251 DMGRVVELGHPHELLHNRH 1269
            ..|:|:|...|..||.|.:
 Frog  1401 AQGQVMEYDTPSALLSNEN 1419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 433/1380 (31%)
ABC_membrane 92..358 CDD:294371 67/281 (24%)
ABCC_MRP_domain1 423..626 CDD:213217 82/262 (31%)
ABC_membrane 762..988 CDD:294371 77/236 (33%)
ABCC_MRP_domain2 1042..1261 CDD:213211 116/219 (53%)
abcc5XP_012818083.1 PLN03130 101..1425 CDD:215595 434/1380 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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