DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdog and yejF

DIOPT Version :10

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_416685.1 Gene:yejF / 946689 ECOCYCID:EG12041 Length:529 Species:Escherichia coli


Alignment Length:565 Identity:119/565 - (21%)
Similarity:225/565 - (39%) Gaps:143/565 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   879 RFSKDIRTV--DTDLPHTLLDCLAFIIDVSGVVIIVAIANYWLLIPAAIIGVILGMIRY-----L 936
            |..:.:|||  |..|.....:.|| ::..||....|...:...|:|:..:..:.|.||:     |
E. coli    16 RHQQTVRTVVNDVSLQIEAGETLA-LVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLL 79

  Fly   937 YVN--TSRSVK--------RLESISRSPVFSLTNQTFQGLTTIRAL------------------- 972
            :.:  |.|.|:        :...:|.:|:.:|..|.::.|:..|.:                   
E. coli    80 HASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIR 144

  Fly   973 QAQSALEQEFHEYQNTNTSAWFLFLS-CTRAFALWSDVLCIVYMTAVTFSFLLLKDEFDSGDVGL 1036
            ||...|....|:..........:.:: .||...|.:|........:|....|.|..|. .|::.:
E. coli   145 QAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLREL-QGELNM 208

  Fly  1037 AILHSTTMTGMCQWGMRQTAELENQMTSVERVLE--------------YTE-----QPSEALLET 1082
            .:|..|....:.:....:.|.::|     .|.:|              ||:     :||...:..
E. coli   209 GMLFITHNLSIVRKLAHRVAVMQN-----GRCVEQNYAATLFASPTHPYTQKLLNSEPSGDPVPL 268

  Fly  1083 PEKFKPKSEWPSKGRIEFINFKLRYSPKEA---------PVLKDLNFTIEPREKIGIVGRTGAGK 1138
            ||        |:...::....::.:..::.         .|:|:::||:...|.:|:||.:|:||
E. coli   269 PE--------PASTLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGK 325

  Fly  1139 SSIIQSIFRLACNEGMIRIDDVDIEHIG---LHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSD 1200
            |:...::.||..::|.|..|...::::.   |..:|.::.::.|||   :.:|...|:.:.    
E. coli   326 STTGLALLRLINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDP---NSSLNPRLNVLQ---- 383

  Fly  1201 EEMWKALGDVELRSYVSTLIGG-----LNCRMYDGG----------SNFSVGQRQLVCLARAILR 1250
                  :.:..||.:..||...     :...|::.|          :.||.||||.:.:|||::.
E. coli   384 ------IIEEGLRVHQPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALIL 442

  Fly  1251 HNKILIMDEATANVDPETDKLIQQTIRS-----KFAHCTVLTIAHRLHTVMD-SDRVLVMDAGEV 1309
            ...::|:||.|:::|......|...::|     :.|:   |.|:|.||.|.. ..:|:::..|||
E. coli   443 KPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAY---LFISHDLHVVRALCHQVIILRQGEV 504

  Fly  1310 RELGHPYELLQRTGGYLRQLVDNTGAATSFALQQAAEQSYSKQIL 1354
            .|.|                    ..|..||..|   |.|::|:|
E. coli   505 VEQG--------------------PCARVFATPQ---QEYTRQLL 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 MRP_assoc_pro 14..1323 CDD:188098 111/532 (21%)
yejFNP_416685.1 PRK15134 1..529 CDD:237917 119/565 (21%)

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