DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdog and NFT1

DIOPT Version :9

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_013029.3 Gene:NFT1 / 853978 SGDID:S000001811 Length:1218 Species:Saccharomyces cerevisiae


Alignment Length:1067 Identity:242/1067 - (22%)
Similarity:455/1067 - (42%) Gaps:238/1067 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 AELWEDELKRSNPSVV----------RM---ILRAYGKIFV-PMGLAF--SISETICKSLMPLFL 111
            |::|:.::...:.:::          |:   |:..:..:|: .:.|||  |....:...|||..|
Yeast   272 ADIWDLDINNKSIAILANFEMSSKKGRLLPNIICYFKAVFISQLFLAFVSSFLNFVPSLLMPRIL 336

  Fly   112 GGLVGYFATNQTDISENTAYLYAMGIVICMLVPVITFHPFIFYIFQVGT-KLRLALSGLIYRKVL 175
            .     :..:....|.|...||...:::..:: ..|......::.:.|| :||..|...||.|.|
Yeast   337 S-----YVNDPKSKSWNLVSLYVSSMLVSKII-ATTCRGQGLFLGEKGTMQLRTVLISNIYSKTL 395

  Fly   176 QVS------------------------------KSSSNDGLRGRAINILSNDLGRFDVALCFLHD 210
            :.:                              |||..|   ....|::|.|..:...|:...:.
Yeast   396 RRTILKDSTTSLQKNASTSFEENPDSSEAEPRKKSSRKD---NSVNNVMSIDAFKVSEAMNTFYL 457

  Fly   211 TWKGPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTAER---TDMRVKLM 272
            ..:....::....::|..:|.||..|...:|:.|||..|.   |.:|....|::   ||.|...:
Yeast   458 ACEAVFMTVTALMILYSLLGWSAFAGTFALLAMIPLNFWC---ATFYGNYQADQLILTDKRTSGI 519

  Fly   273 NEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYI----HAA--LGCTSMISPL--SVFL 329
            :|.:..|:|||:.|||..|.:.|..||..|::.::..|.|    |..  .|.| ::|.:  |||:
Yeast   520 SEALNSIRVIKLLAWENLFYQKIINVRDGEIRLLKKKATIFFLNHLIWFFGPT-LVSAITFSVFI 583

  Fly   330 ALCSYVYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLLDGDKAEVP 394
            .     :....||....:|..|.|.:|...|... ..:::.:.::.:|.:|.:|:|.:.:..:..
Yeast   584 K-----FQNQTLTPTIAFTALSLFAILRTPMDQI-ASTVSLLIQSFISLERIQDYLNESETRKYE 642

  Fly   395 INLEANQQTGKNKRKISKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKNVSASWDT 459
            |..::|.:.|                                             .::.|..|:.
Yeast   643 ILEQSNTKFG---------------------------------------------FEDASMEWEA 662

  Fly   460 SDGHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVH----------GK 514
            ::  .:..:::.|.|.|..:|.|::||.|:||||.|..||||:.:..|:..|.          ||
Yeast   663 AE--TSFKLKNISIDFKLNSLNAIIGPTGSGKSSLLLGLLGELNLLSGKIYVPTVESRDDLEIGK 725

  Fly   515 ------ISYASQESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGV 573
                  ::|.||..|:..|||:||:||.|.:|::::..|:|.|.|::|::.:..|..|.||:.|.
Yeast   726 DGMTNSMAYCSQTPWLISGTIKDNVVFGEIFNKQKFDDVMKSCCLDKDIKAMTAGIRTDVGDGGF 790

  Fly   574 SLSGGQKARVSLARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCI-RDFLSNKIRILVTHQVQYL 637
            ||||||:.|::||||:|..:...:|||.|||||.....:|::.|: ...:..:..|:.:|.:..:
Yeast   791 SLSGGQQQRIALARAIYSSSRYLILDDCLSAVDPETALYIYEECLCGPMMKGRTCIITSHNISLV 855

  Fly   638 FD-VEHLLLMGSGKIMAQGSYQELQRSRQFQFLEQTQHDESGIDTHSVSSYLSRSDSEKSME--- 698
            .. .:.|:::..|::.:||...:|.:|.  :||.::.:::|...||:... |.||.:.|..:   
Yeast   856 TKRADWLVILDRGEVKSQGKPSDLIKSN--EFLRESINNDSKNTTHNQID-LKRSTTSKKTKNGD 917

  Fly   699 ----HQHNQLLRPDEHVEDVNQEQQTVGSIKMHVY---ASYIKALDSTFLLGIVISLFVCARIML 756
                :..:::....|:.|:...|    ||:|...|   |.|...|.       |:.:|..:.|::
Yeast   918 PEGGNSQDEVCAEVENFEETKME----GSVKFSAYKWLADYFGGLG-------VVFVFTSSSILI 971

  Fly   757 TGV----DYFLSRWVIWEEQIAVNRTTTLLNETDTTIANDTLPINATDPY----------IAPLL 807
            .|:    .::|..|:                :|.::.:..|......:.:          |..|:
Yeast   972 HGITLSQGFWLRYWL----------------DTGSSGSKSTWLYRIVEGHSNIYFLLTYIIIGLV 1020

  Fly   808 ASDIQAGIRQELVLFYATILGATLIVYLIRTFGFFKMCLRISLHLHDRLFRGITRASMYFFNTNS 872
            :|.:.:|     .::.|.|.|.                 .::..:..:|...|..|.:.|.|...
Yeast  1021 SSFLTSG-----KVWIAIISGT-----------------NVTKKIFAKLLSSILYAKLRFHNVTP 1063

  Fly   873 SGRILNRFSKDIRTVDTD-------LPHTLLDCLAFIIDVSGVVIIVAIANYWLLIPAAIIGVIL 930
            :|||:||||||:..:|..       |.::::.||       .:::::.......|:.|..:..:.
Yeast  1064 TGRIMNRFSKDMDIIDQQLIPNFEGLSYSVVVCL-------WIILLIGYVTPQFLLFAIPLCALY 1121

  Fly   931 GMIRYLYVNTSRSVKRLESISRSPVFSLTNQTFQGLTTIRAL-QAQSALEQEFHEYQNTNTSAWF 994
            ..:..||:..||.:||:::|:.||:..|..:..:|:|||||| ..:..:.|.......:|...::
Yeast  1122 YTVCTLYLRASRELKRIDNINISPIHQLFAEAIKGVTTIRALADERRFITQSLVAIDRSNAPFFY 1186

  Fly   995 LFLSCTRAFALWSDVLCIVYMTAVTFS 1021
            |.::..     |......:..|.|.||
Yeast  1187 LNMATE-----WITYRVDIIGTLVLFS 1208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 242/1067 (23%)
ABC_membrane 94..360 CDD:294371 74/309 (24%)
ABCC_MRP_domain1 448..650 CDD:213217 71/219 (32%)
ABC_membrane 821..1046 CDD:294371 48/209 (23%)
ABCC_MRP_domain2 1096..1315 CDD:213211
NFT1NP_013029.3 MRP_assoc_pro 252..>1218 CDD:188098 242/1067 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344669
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - O PTHR24223
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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