DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdog and YOR1

DIOPT Version :9

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_011797.3 Gene:YOR1 / 853198 SGDID:S000003513 Length:1477 Species:Saccharomyces cerevisiae


Alignment Length:1435 Identity:420/1435 - (29%)
Similarity:676/1435 - (47%) Gaps:178/1435 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RKVVRPKNPFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQ--HRKTLDS------------- 55
            ||:.    |....|..|...|||:..:.:.|.:..:...:|::  .|.::::             
Yeast   105 RKIY----PLFHTNIISNMFFWWVLPILRVGYKRTIQPNDLFKMDPRMSIETLYDDFEKNMIYYF 165

  Fly    56 ERVTNKF----AELWEDEL----KRSNPSVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLG 112
            |:...|:    .|..|:|:    |....:|:|.:|..:.|.:. |.:.|:|.........|:...
Yeast   166 EKTRKKYRKRHPEATEEEVMENAKLPKHTVLRALLFTFKKQYF-MSIVFAILANCTSGFNPMITK 229

  Fly   113 GLVGYFATNQT--DISENTAYLYAMGIVICMLVPVITFHPFIFYIFQV-GTKLRLALSGLIYRKV 174
            .|:.:......  .:..|....||:|..:.|.|..:||:.| |:..|: |.:.:..|:....:|:
Yeast   230 RLIEFVEEKAIFHSMHVNKGIGYAIGACLMMFVNGLTFNHF-FHTSQLTGVQAKSILTKAAMKKM 293

  Fly   175 LQVSKSSSNDGLRGRAINILSNDLGRFDVALCFLHDTWKGPMESILIGF---------LMYREIG 230
            ...|..:.:....|:..:.::.||.|.:.||.|         :..|.||         |:...:|
Yeast   294 FNASNYARHCFPNGKVTSFVTTDLARIEFALSF---------QPFLAGFPAILAICIVLLIVNLG 349

  Fly   231 ISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTAERTDMRVKLMNEIIQGIQVIKMYAWEKSFARVI 295
            ..|::|:........:..:|.|....:|......||.||.:|.|::..|::||.|.||.::.:.|
Yeast   350 PIALVGIGIFFGGFFISLFAFKLILGFRIAANIFTDARVTMMREVLNNIKMIKYYTWEDAYEKNI 414

  Fly   296 AEVRLKEVKAIR----GTAYIHAALGCTSMISPLSVFLALCSYVYLGDPLTAQKVYTVSSYFNML 356
            .::|.||:..:|    ...::.|.......|:.|..|||:  |...........::...|.|.:|
Yeast   415 QDIRTKEISKVRKMQLSRNFLIAMAMSLPSIASLVTFLAM--YKVNKGGRQPGNIFASLSLFQVL 477

  Fly   357 NDSMVTFWPMSITFIAEALVSAKRCKDFLLDGDKAEVPINLEANQQTGKNKRKISK--------K 413
            :..|. |.|::|....:.::...|.:. ||:..:.:....:|.....|.:.:...|        :
Yeast   478 SLQMF-FLPIAIGTGIDMIIGLGRLQS-LLEAPEDDPNQMIEMKPSPGFDPKLALKMTHCSFEWE 540

  Fly   414 DKQKN---VELNGSLLSNGQVHHNRLRDY--DPEA-TKKCVVLKNVSASWDTSDGHANCA---IE 469
            |.:.|   .|..|.....|:.:..:.:|.  .|.| |.|...|.|:....|..:.....:   .:
Yeast   541 DYELNDAIEEAKGEAKDEGKKNKKKRKDTWGKPSASTNKAKRLDNMLKDRDGPEDLEKTSFRGFK 605

  Fly   470 DFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVHGKISYASQESWVFEGTIRDNIV 534
            |.:.|||......:.||:|.||||.||.:.|.:....|:..|:|.:..... .|:...::||||:
Yeast   606 DLNFDIKKGEFIMITGPIGTGKSSLLNAMAGSMRKTDGKVEVNGDLLMCGY-PWIQNASVRDNII 669

  Fly   535 FVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKARVSLARAVYRKADIYLLD 599
            |...:|:.:|.:||:||.|:.|:::||.||:|.:||||::||||||||::|||:||:|.||||.|
Yeast   670 FGSPFNKEKYDEVVRVCSLKADLDILPAGDMTEIGERGITLSGGQKARINLARSVYKKKDIYLFD 734

  Fly   600 DPLSAVDTHVGKHIFDRCIRDFLSNKIRILVTHQVQYLFDVEHLLLMGSGKIMAQGSYQELQRSR 664
            |.|||||:.|||||.|.|:...|:||.|||.|||:..:.....::::|:...:..|:..||:...
Yeast   735 DVLSAVDSRVGKHIMDECLTGMLANKTRILATHQLSLIERASRVIVLGTDGQVDIGTVDELKARN 799

  Fly   665 Q-----FQFLEQTQHDESGIDTHSVSSYLSRSDSEKSMEH---------QHNQLLRPDEHVED-- 713
            |     .||..|....|.......|:..|.:...|..::.         :.:|.....:.|.|  
Yeast   800 QTLINLLQFSSQNSEKEDEEQEAVVAGELGQLKYESEVKELTELKKKATEMSQTANSGKIVADGH 864

  Fly   714 -VNQEQQTVGSIKMHVYASYIKALDSTFLLG----IVISLFVCARIMLTGVDYFLSRWV-IWEEQ 772
             .::|::.|.||.:.:|..||||     .:|    |.:.|:....:..|....|.|.|: .|.|.
Yeast   865 TSSKEERAVNSISLKIYREYIKA-----AVGKWGFIALPLYAILVVGTTFCSLFSSVWLSYWTEN 924

  Fly   773 IAVNRTTTLLNETDTTIANDTLPINATDPYIAPLLASDIQAGIRQELVLFYATILGATLIVYLIR 837
            ...||..:                                         ||..:....:....|.
Yeast   925 KFKNRPPS-----------------------------------------FYMGLYSFFVFAAFIF 948

  Fly   838 TFGFF----KMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTDLPHTLLDC 898
            ..|.|    .|.:..|..|:.|..:.|....|.:.:|...|||||||:||..::|.:|..:|...
Yeast   949 MNGQFTILCAMGIMASKWLNLRAVKRILHTPMSYIDTTPLGRILNRFTKDTDSLDNELTESLRLM 1013

  Fly   899 LAFIIDVSGVVIIVAIANYWLLIPAAIIGVILGMIRYLYVNTSRSVKRLESISRSPVFSLTNQTF 963
            .:...::.||.::..:...|..|....:.||..:|...|.::.|.:||||::.||.|::..|:..
Yeast  1014 TSQFANIVGVCVMCIVYLPWFAIAIPFLLVIFVLIADHYQSSGREIKRLEAVQRSFVYNNLNEVL 1078

  Fly   964 QGLTTIRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDVLCIVYMTAVTFSFLLLKDE 1028
            .|:.||:|.::|.....:.....|....|.:|.:...|...::.|::.|.:...:|...:.....
Yeast  1079 GGMDTIKAYRSQERFLAKSDFLINKMNEAGYLVVVLQRWVGIFLDMVAIAFALIITLLCVTRAFP 1143

  Fly  1029 FDSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEY-TEQPSEALLETPEKFKPKSEW 1092
            ..:..||:.:.:...:.|:....:|...:.||.|.|.||::.| ||.|.||....||...|:| |
Yeast  1144 ISAASVGVLLTYVLQLPGLLNTILRAMTQTENDMNSAERLVTYATELPLEASYRKPEMTPPES-W 1207

  Fly  1093 PSKGRIEFINFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFRLACNE---GM 1154
            ||.|.|.|.|....|.|....|||:||..|:..|||||.||||||||:|:.:::||  ||   |.
Yeast  1208 PSMGEIIFENVDFAYRPGLPIVLKNLNLNIKSGEKIGICGRTGAGKSTIMSALYRL--NELTAGK 1270

  Fly  1155 IRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKA-----------LG 1208
            |.||:|||..:||.|||.:::|||||||||.||:|.||||.:||:|:|:|.|           |.
Yeast  1271 ILIDNVDISQLGLFDLRRKLAIIPQDPVLFRGTIRKNLDPFNERTDDELWDALVRGGAIAKDDLP 1335

  Fly  1209 DVELRSYVSTLIGGLNCRMY---------DGGSNFSVGQRQLVCLARAILRHNKILIMDEATANV 1264
            :|:|:....   .|.:.:|:         :.|||||:|:|||:.|.||::|.:||||:||||::|
Yeast  1336 EVKLQKPDE---NGTHGKMHKFHLDQAVEEEGSNFSLGERQLLALTRALVRQSKILILDEATSSV 1397

  Fly  1265 DPETDKLIQQTIRSKFAHCTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQRTGGYLRQL 1329
            |.|||..||..|..:|..||:|.|||||.|:::.||:||::.|||.|...|:.|..:.....|.:
Yeast  1398 DYETDGKIQTRIVEEFGDCTILCIAHRLKTIVNYDRILVLEKGEVAEFDTPWTLFSQEDSIFRSM 1462

  Fly  1330 VDNTG 1334
            ...:|
Yeast  1463 CSRSG 1467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 418/1429 (29%)
ABC_membrane 94..360 CDD:294371 63/281 (22%)
ABCC_MRP_domain1 448..650 CDD:213217 85/204 (42%)
ABC_membrane 821..1046 CDD:294371 55/228 (24%)
ABCC_MRP_domain2 1096..1315 CDD:213211 116/241 (48%)
YOR1NP_011797.3 MRP_assoc_pro 92..1468 CDD:188098 420/1435 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I2258
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1827
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.660

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