DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdog and ABCC9

DIOPT Version :9

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_191575.2 Gene:ABCC9 / 825186 AraportID:AT3G60160 Length:1506 Species:Arabidopsis thaliana


Alignment Length:1379 Identity:414/1379 - (30%)
Similarity:668/1379 - (48%) Gaps:186/1379 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NPFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSER-VTNKFAELWEDELKRSNP- 75
            :|:..|..|.:.:|.|:..||..|.:.||..::: ......||.| .::.|.:..:...::..| 
plant   235 SPYGNATLFQRITFSWINPLFSLGYKRPLEKDDV-PDIDVKDSARFCSHAFDQKLKTTKEKEGPG 298

  Fly    76 ------SVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLGGLVGYFATNQTDISENTAYLYA 134
                  ||:|.:.|.     ..:...|::.......:.|..:...|.:.:..|:. |.|..||.|
plant   299 NAFFYNSVLRYVWRK-----AAINAVFAVVNASTAYIGPYLINDFVEFLSEKQSQ-SLNHGYLLA 357

  Fly   135 MGIVICMLVPVITFHPFIFYIFQVGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRAINILSNDLG 199
            :|.:...:|..:|...:||...|:|.:||.||...||:|.|.:|..|......|..||.:|.|:.
plant   358 LGFLTAKIVETVTQRQWIFGARQLGLRLRAALISHIYQKGLVLSSQSRQSHTSGEIINYMSVDVQ 422

  Fly   200 RFDVALCFLHDTWKGPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTAER 264
            |....:.::::.|..|::.....:::.:.:|:.|:..:...|..:.......:....|:......
plant   423 RITDFIWYVNNIWMLPIQIFSAIYILQKHLGLGALAALVTTLMVMACNYPLTRLQRNYQSDIMNA 487

  Fly   265 TDMRVKLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKEV----KAIRGTAYIHAAL-GCTSMISP 324
            .|.|:|..:||::.::::|:.||:..|...:..:|.||.    |::|..|:....| |..|:|| 
plant   488 KDDRMKATSEILKNMKILKLQAWDNQFLNKVKTLRKKEYDCLWKSLRLQAFTTFILWGAPSLIS- 551

  Fly   325 LSVFLALCSYVYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLLDGD 389
             .|....|  :.:|..|||..|.:..:.|.|| .|.:...|..::.:.::.|||.|...:|    
plant   552 -VVTFVTC--MLMGVKLTAGAVLSALATFQML-QSPIFGLPDLLSALVQSKVSADRIASYL---- 608

  Fly   390 KAEVPINLEANQQTGKNKRKI---SKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLK 451
                       ||:...|..:   ||...:.:||:.....|           ::||:::.     
plant   609 -----------QQSETQKDAVEYCSKDHTELSVEIENGAFS-----------WEPESSRP----- 646

  Fly   452 NVSASWDTSDGHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVHGKIS 516
                           .::|....:|.....||.|.||:||||.|:.:|||:...||...|.||.:
plant   647 ---------------TLDDIELKVKSGMKVAVCGAVGSGKSSLLSSILGEIQKLKGTVRVSGKQA 696

  Fly   517 YASQESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKA 581
            |..|..|:..|||||||:|...|...:|::.||.|.|.:|.||...||||.:||||:::|||||.
plant   697 YVPQSPWILSGTIRDNILFGSMYESEKYERTVKACALIKDFELFSNGDLTEIGERGINMSGGQKQ 761

  Fly   582 RVSLARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCIRDFLSNKIRILVTHQVQYLFDVEHLLLM 646
            |:.:|||||:.|||||||||.||||.|.|:.:|:.|:...|.:|..:.|||||::|...:.:|:|
plant   762 RIQIARAVYQNADIYLLDDPFSAVDAHTGRELFEDCLMGILKDKTVLYVTHQVEFLPAADLILVM 826

  Fly   647 GSGKIMAQGSYQEL-------------------------QRSRQFQFLEQTQHDESGIDTHSVSS 686
            .:|::|..|.::||                         :.||.|:       :.|..||.|::.
plant   827 QNGRVMQAGKFEELLKQNIGFEVLVGAHNEALDSILSIEKSSRNFK-------EGSKDDTASIAE 884

  Fly   687 YL-SRSDSEKSMEHQHNQLLRPDEHVEDVNQEQQTVGSIKMHVYASYIKALDSTFLLGIVISLFV 750
            .| :..|||.::..::.:     :..:.|..|:...|.|...||.:|:..:....|:..:|....
plant   885 SLQTHCDSEHNISTENKK-----KEAKLVQDEETEKGVIGKEVYLAYLTTVKGGLLVPFIILAQS 944

  Fly   751 CARIMLTGVDYFLSRWVIWEEQIAVNRTTTLLNETDTTIANDTLPINATDPYIAPLLASDIQAGI 815
            |.:::....:|    |:.|                                 .||..|..|....
plant   945 CFQMLQIASNY----WMAW---------------------------------TAPPTAESIPKLG 972

  Fly   816 RQELVLFYATILGATLIVYLIRTFGFFKMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRF 880
            ...::|.||.:...:.:..|.||.......|..:.....|:...|.||.|.||::..:||||||.
plant   973 MGRILLVYALLAAGSSLCVLARTILVAIGGLSTAETFFSRMLCSIFRAPMSFFDSTPTGRILNRA 1037

  Fly   881 SKDIRTVDTDLPHTLLDCLAFIIDVSGVVIIVA-IANYW----LLIPAAIIGVILGMIRYLYVNT 940
            |.|...:|.::...|..|...||.:.|.:.::: :|  |    :.||.|:..|...  || |..|
plant  1038 STDQSVLDLEMAVKLGWCAFSIIQIVGTIFVMSQVA--WQVCVIFIPVAVACVFYQ--RY-YTPT 1097

  Fly   941 SRSVKRLESISRSPVFSLTNQTFQGLTTIRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFAL 1005
            :|.:.|:..:.|:|:.....::..|.|||||...:...........::::..||...|...    
plant  1098 ARELSRMSGVERAPILHHFAESLAGATTIRAFDQRDRFISSNLVLIDSHSRPWFHVASAME---- 1158

  Fly  1006 W-SDVLCIVYMTAVTFSFLLL----KDEFDSGDVGLA--------ILHSTTMTGMCQWGMRQTAE 1057
            | |..|.::......||.:||    :...:....||.        :|.:|.:..:|        .
plant  1159 WLSFRLNLLSHFVFAFSLVLLVTLPEGVINPSIAGLGVTYGLSLNVLQATVIWNIC--------N 1215

  Fly  1058 LENQMTSVERVLEYTEQPSEALLETPEKFKPKSEWPSKGRIEFINFKLRYSPKEAPVLKDLNFTI 1122
            .||:|.||||:|:|::.||||.| ..:..:|...||:.|.|.|.:.::||:.....|||::....
plant  1216 AENKMISVERILQYSKIPSEAPL-VIDGHRPLDNWPNVGSIVFRDLQVRYAEHFPAVLKNITCEF 1279

  Fly  1123 EPREKIGIVGRTGAGKSSIIQSIFRLA-CNEGMIRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSG 1186
            ...:|||:|||||:|||::||::||:. .::|.|.||:|||..||||||||::.||||||.||.|
plant  1280 PGGKKIGVVGRTGSGKSTLIQALFRIVEPSQGTIVIDNVDITKIGLHDLRSRLGIIPQDPALFDG 1344

  Fly  1187 TLRYNLDPMDERSDEEMWKALGDVELRSYVSTLIGGLNCRMYDGGSNFSVGQRQLVCLARAILRH 1251
            |:|.||||:.:.:|.|:|:|:...:|...:......|:..:.:.|.|:||||||||||.|.:|:.
plant  1345 TIRLNLDPLAQYTDHEIWEAIDKCQLGDVIRAKDERLDATVVENGENWSVGQRQLVCLGRVLLKK 1409

  Fly  1252 NKILIMDEATANVDPETDKLIQQTIRSKFAHCTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPY 1316
            :.||::|||||:||..||.:||:.|..:|...||:|||||:|||::||.|||:..|.:.|...|.
plant  1410 SNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPA 1474

  Fly  1317 ELLQRTGGYLRQLV 1330
            :||||...:..:|:
plant  1475 KLLQREDSFFSKLI 1488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 414/1379 (30%)
ABC_membrane 94..360 CDD:294371 68/270 (25%)
ABCC_MRP_domain1 448..650 CDD:213217 86/201 (43%)
ABC_membrane 821..1046 CDD:294371 62/242 (26%)
ABCC_MRP_domain2 1096..1315 CDD:213211 105/219 (48%)
ABCC9NP_191575.2 PLN03232 68..1488 CDD:215640 413/1377 (30%)
ABC_membrane 319..586 CDD:294371 69/272 (25%)
ABCC_MRP_domain1 630..830 CDD:213217 91/230 (40%)
ABC_membrane 973..1209 CDD:294371 61/244 (25%)
ABCC_MRP_domain2 1253..1473 CDD:213211 105/219 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.720

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