DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdog and ABCC7

DIOPT Version :9

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_187917.3 Gene:ABCC7 / 820498 AraportID:AT3G13100 Length:1493 Species:Arabidopsis thaliana


Alignment Length:1371 Identity:416/1371 - (30%)
Similarity:664/1371 - (48%) Gaps:164/1371 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKF----AEL-WEDELKRS 73
            ||:.|.|.|..||.||..|...|.:..:..|::.|   ..:|:|....|    ::| |:|..:|.
plant   231 PFSNAGFLSHVSFSWMSPLIVLGNEKIIDSEDVPQ---VDNSDRAEKLFWIFRSKLEWDDGERRI 292

  Fly    74 NPSVVRMILRAYGKIF--VPMGLAFSISETICKSLMPLFLGGLVGYFATNQTDISENTAYLYAMG 136
              :..::|...:..::  :.:...|:...|:...:.|..:...|.|. ..|...| |...:....
plant   293 --TTYKLIKALFFSVWRDILLSTLFAFVYTVSCYVAPYLMDTFVQYL-NGQRQYS-NQGVVLVTT 353

  Fly   137 IVICMLVPVITFHPFIFYIFQVGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRAINILSNDLGRF 201
            ..:..||.......:.|.:.:.|..:|..|..:||.|.|.:...|......|..||:::.|..|.
plant   354 FFVAKLVECQARRNWYFRLQKAGIGMRSVLVSMIYEKGLTLPCYSKQGHTSGEIINLMTVDAERI 418

  Fly   202 DVALCFLHDTWKGPMESILIGFLMYREIGISAVIGVS----FMLSFIPLQAWAAKKAAYYRQMTA 262
            .....::||.|...::..|...::||.:|:.::...:    .||..|||    ||....::....
plant   419 SAFSWYMHDPWILVLQISLALLILYRSLGLGSIAAFAATFLVMLGNIPL----AKLEEKFQGNLM 479

  Fly   263 ERTDMRVKLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYIHAALGCTSMISPLSV 327
            |..|.|:|..:|.:..::::|:..||..|...|.::|..|...::...|..||:......:|..|
plant   480 ESKDNRMKKTSEALLNMRILKLQGWEMKFLHKILDLRGIEAGWLKKFVYNSAAISSVLWAAPSFV 544

  Fly   328 -FLALCSYVYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLLDGDKA 391
             ..|..:.:.|..||.:.|:....:.|.:|...:... |.:|:.|.:..||..|...||.     
plant   545 SATAFGACMLLKIPLESGKIIAALATFRILQTPIYKL-PDTISMIVQTKVSLDRIATFLC----- 603

  Fly   392 EVPINLEANQQTGKNKRKISKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKNVSAS 456
                 |:..||.|..:                  |.:|             ::|..|.:.|.:.|
plant   604 -----LDDLQQDGMER------------------LPSG-------------SSKMDVEVSNGAFS 632

  Fly   457 WDTSDGHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVHGKISYASQE 521
            ||  |......::|....|......|:.|.||:||||.|:.:||||....|...|.|:.:|.:|.
plant   633 WD--DSSPIPTLKDIRFKIPHGMNIAICGTVGSGKSSLLSSILGEVPKISGNLKVCGRKAYIAQS 695

  Fly   522 SWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKARVSLA 586
            .|:..|.:.:||:|.:......|::|::.|.|.:|:|:.|..|.||:||||::||||||.|:.:|
plant   696 PWIQSGKVEENILFGKPMQREWYQRVLEACSLNKDLEVFPFRDQTVIGERGINLSGGQKQRIQIA 760

  Fly   587 RAVYRKADIYLLDDPLSAVDTHVGKHIFDRCIRDFLSNKIRILVTHQVQYLFDVEHLLLMGSGKI 651
            ||:|:.|||||.|||.||||.|.|.|:|...:...|.||..|.||||:::|.:.:.:|:|..|:|
plant   761 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRNKTVIYVTHQLEFLPEADLILVMKDGRI 825

  Fly   652 MAQGSYQELQRSRQFQFLEQT-QHDESGIDTHSVSSYLSRSDSEKSMEHQHNQLLRPDEHVED-- 713
            ...|.|.|:..|.. .|:|.. .|.::   ..:|.||...|.|.:|...:.:::...:|..|:  
plant   826 TQAGKYNEILESGT-DFMELVGAHTDA---LAAVDSYEKGSASAQSTTSKESKVSNDEEKQEEDL 886

  Fly   714 -------VNQEQQTVGSIKMHVYASYIKALDSTFLLGIVISLFVCARIMLTGVDYFLSRWVIWEE 771
                   |.:|::..|.:...||..|:|......|:.|::.:.:..:::..|.:|    |:.|. 
plant   887 PSPKGQLVQEEEREKGKVGFTVYQKYMKLAYGGALVPIILVVQILFQVLNIGSNY----WMAWV- 946

  Fly   772 QIAVNRTTTLLNETDTTIANDTLPINATDPYIAPLLASDIQAGIRQELVLFYATILGATLIVYLI 836
                           |.::.|          :.||::.       ..|:|.|..:..|:....|:
plant   947 ---------------TPVSKD----------VKPLVSG-------STLILVYVFLATASSFCILV 979

  Fly   837 RTF-----GFFKMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTDLPHTLL 896
            |..     | ||:...:...:|.|:|    ||||.||:....||||||.|.|...||..||....
plant   980 RAMLSAMTG-FKIATELFNQMHFRIF----RASMSFFDATPIGRILNRASTDQSAVDLRLPSQFS 1039

  Fly   897 DCLAFIIDVSGVVIIVAIANYWLLIPAAIIGVILG--MIRYLYVNTSRSVKRLESISRSPVFSLT 959
            :.....:::.|::.::....:.:||  ..|.||..  ..|..|::.:|.:.||..|||||:....
plant  1040 NLAIAAVNILGIIGVMGQVAWQVLI--VFIPVIAACTWYRQYYISAARELARLSGISRSPLVQHF 1102

  Fly   960 NQTFQGLTTIRALQAQSALEQE------------FHEYQNTNTSAWFLF---LSCTRAFALWSDV 1009
            ::|..|:||||:...:.....:            ||.   .:...|..|   |..|.||||...:
plant  1103 SETLSGITTIRSFDQEPRFRTDIMRLNDCYSRLRFHA---ISAMEWLCFRLDLLSTVAFALSLVI 1164

  Fly  1010 LCIVYMTAVTFSFLLLKDEFDSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEYTEQ 1074
            |..|....:..||           .|||:.::..:..:....:....:|||:|.||||:|:|.:.
plant  1165 LVSVPEGVINPSF-----------AGLAVTYALNLNSLQATLIWTLCDLENKMISVERMLQYIDI 1218

  Fly  1075 PSEALLETPEKFKPKSEWPSKGRIEFINFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTGAGKS 1139
            |||..| ..|..:|:..||.:|.|...|.::||.|....||:.|..|.....|.|||||||.|||
plant  1219 PSEPSL-VIESTRPEKSWPCRGEITICNLQVRYGPHLPMVLRGLTCTFRGGLKTGIVGRTGCGKS 1282

  Fly  1140 SIIQSIFRLA-CNEGMIRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEM 1203
            ::||::||:. ...|.||||.::|..||||||||::|||||:|.:|.||:|.||||::|.:|:::
plant  1283 TLIQTLFRIVEPAAGEIRIDGINILTIGLHDLRSRLSIIPQEPTMFEGTVRSNLDPLEEYADDQI 1347

  Fly  1204 WKALGDVELRSYVSTLIGGLNCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANVDPET 1268
            |:||...:|...:......|:..:.:.|.|:||||||||||.|.:|:.:|:||:|||||:||..|
plant  1348 WEALDKCQLGDEIRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKVLILDEATASVDTAT 1412

  Fly  1269 DKLIQQTIRSKFAHCTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQ-RTGGYLRQLVDN 1332
            |.|||:|:|..|:.|||:|||||:.:|:|||.||::|.|.:.|...|..||: ::..:.:.:.:.
plant  1413 DTLIQETLRQHFSGCTVITIAHRISSVIDSDMVLLLDQGLIEEHDSPARLLEDKSSSFSKLVAEY 1477

  Fly  1333 TGAATS 1338
            |.::.|
plant  1478 TASSDS 1483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 416/1371 (30%)
ABC_membrane 94..360 CDD:294371 62/270 (23%)
ABCC_MRP_domain1 448..650 CDD:213217 83/201 (41%)
ABC_membrane 821..1046 CDD:294371 68/246 (28%)
ABCC_MRP_domain2 1096..1315 CDD:213211 109/219 (50%)
ABCC7NP_187917.3 PLN03232 34..1474 CDD:215640 414/1360 (30%)
ABC_membrane 309..578 CDD:294371 62/274 (23%)
ABCC_MRP_domain1 624..824 CDD:213217 83/201 (41%)
ABC_membrane 925..1199 CDD:294371 77/331 (23%)
ABCC_MRP_domain2 1239..1459 CDD:213211 109/219 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.720

Return to query results.
Submit another query.