DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdog and abcc9

DIOPT Version :9

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:XP_005164758.1 Gene:abcc9 / 561160 ZFINID:ZDB-GENE-050517-23 Length:1583 Species:Danio rerio


Alignment Length:1439 Identity:422/1439 - (29%)
Similarity:696/1439 - (48%) Gaps:213/1439 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VRPKNPFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFAELWED-ELKR 72
            ||...||  .|..|:.::|||..|.....:.|:   ||.:..|...:.|....:..|.:. |.:|
Zfish   215 VRFLQPF--VNLLSKATYWWMNPLIIGAHKRPI---ELKKIGKLPIAMRALTNYLRLKDSYEEQR 274

  Fly    73 SN-------PSVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLGGLV--------------- 115
            .|       ||:.:.:.||:|...: :...|.....:.....||.:.|:|               
Zfish   275 QNTEDPEKSPSIWKSMYRAFGGSIL-LSSTFRYMADLLGFAGPLCISGIVEHLHNSTEIDRTNKT 338

  Fly   116 -----GYFATNQTDISENTAYLYAMGIVICMLVPVI--TFHPFIFYI-FQVGTKLRLALSGLIYR 172
                 |.:..:.|::.:||:.|    .|:..|..|:  ||....:|: .:.|..||.||..:||.
Zfish   339 GNMTFGVYFMSSTELLQNTSVL----AVLLFLALVLQRTFLQASYYVTIETGINLRGALLAMIYN 399

  Fly   173 KVLQVSKSSSNDG--LRGRAINILSNDLGRFDVALCFLHDTWKGPMESILIGFLMYREIGISAVI 235
            |:|::|.|:.:.|  ..|:..|:::.:..:....|....:.|..|::.|:...|:|..:|.||:|
Zfish   400 KILRLSTSNMSMGEMTLGQINNLVAIETNQLMWFLFLCPNLWAMPVQIIMGVILLYYLLGNSALI 464

  Fly   236 GVSFMLSFIPLQAWAAKKAAYYRQMTAERTDMRVKLMNEIIQGIQVIKMYAWEKSFARVIAEVRL 300
            |...:|...|:|...|.|.|..::.|.:.:..|:|...||::||:::|:||||..|...:.|.|.
Zfish   465 GAGVILLLAPVQYLIATKLADIQKSTLDYSTDRLKKTTEILKGIKLLKLYAWENIFCDRVEETRG 529

  Fly   301 KEVKAIRGTAYIHAALGC-TSMISPLSVFLA-LCSYVYL-GDPLTAQKVYTVSSYFNMLNDSMVT 362
            ||:.::: |..:|.::.. .:...|::..|| ..::.|: .|.|:..|.:...:.|::|   :..
Zfish   530 KELTSLK-TFALHTSMSIFMNAAIPIAAVLATFVTHAYIEEDRLSPAKAFASLALFHIL---VTP 590

  Fly   363 FWPMS--ITFIAEALVSAKRCKDFLLD---GD----KAEVPINLEANQQ---TGKNKRKISKKDK 415
            .:.:|  :.|..:||||.::..:||..   ||    ..::.::||..::   .|..| .|::|.:
Zfish   591 LFLLSTVVRFAVKALVSVQKLSEFLQSDEIGDDSWRNGDMCMSLEVGKKYKYQGDTK-AINRKGR 654

  Fly   416 QK--NVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKNVS-ASWDTSDGHANCAIEDFSTDIKD 477
            .:  |.|         |....:||   |..|:...|..|.. .:|    |.....:.|.:..|..
Zfish   655 YRMDNYE---------QPVRRQLR---PSETEDVAVQVNDGFFTW----GSNLSTLSDINIRIPT 703

  Fly   478 QTLAAVVGPVGAGKSSFLNVLLGEVGIDKG----------EAMVHGKIS---------------- 516
            ..|..:||.||.||||.|..:|||:....|          |.:..|.||                
Zfish   704 GQLTMIVGQVGCGKSSLLLAMLGEMQTISGKVYWSKLPDCEILFDGNISGHDMELSHEERSKNRY 768

  Fly   517 ---YASQESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGG 578
               ||:|:||:...|:.:||.|...:|::|||.|:..|.|:.|::|||.||.|.:||||::||||
Zfish   769 SVAYATQKSWLLNATVEENITFGSPFNKQRYKAVIDACSLQPDIDLLPFGDQTEIGERGINLSGG 833

  Fly   579 QKARVSLARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCIRDFLSNKIR--ILVTHQVQYLFDVE 641
            |:.|:.:|||:|:..:|..||||.||:|.|:..|:....|..||.:..|  :||||::|||...:
Zfish   834 QRQRICVARALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTVVLVTHKLQYLIHAD 898

  Fly   642 HLLLMGSGKIMAQGSYQELQRSRQFQFLEQTQHDESGIDTHSVSSY------LSRSDSE----KS 696
            .::.|..|.::.:|:.:::|                   ||.|..|      ::|.|.|    ..
Zfish   899 WIIAMKDGSVLREGTLKDIQ-------------------THDVELYEHWKTLMNRQDQELEKDTD 944

  Fly   697 MEHQ---HNQLLR-------PDEHVEDVNQEQQTV--------------GSIKMHVYASYIKALD 737
            :|.|   ..:.||       ...||:|.::|::..              ..|...:...|:.: .
Zfish   945 LESQTTLERKTLRRAFYSREAKNHVDDEDEEEEVEEEDDDNMSTTTSRRSKIPWKMCCCYLSS-G 1008

  Fly   738 STFLLGIVISLFVCARIMLTGVDYFLSRWVIW--EEQIAVNRT-TTLLNETDTTIANDTLPINAT 799
            ...::.:::|..:....::..:||:|:.|...  ..|..||.: ...||:..|.||.....:   
Zfish  1009 GFLMVFLMVSSKLAKHSVMVAIDYWLAAWTSSNPHNQSFVNSSFNHTLNDDATQIAEHRSYV--- 1070

  Fly   800 DPYIAPLLASDIQAGIRQELVLFYATILGATLIVYLIRTFGFFKMCLRISLHLHDRLFRGITRAS 864
             |....|.|:.|...:...|.:.:..:..||                    :||..|...|..|.
Zfish  1071 -PVFIILCAAAIALCLITSLTVEFLGVAAAT--------------------NLHHNLLNKIIHAP 1114

  Fly   865 MYFFNTNSSGRILNRFSKDIRTVDTDLPHTL-------LDCLAFIIDVSGVVIIVAIANYWLLIP 922
            :.||:....|:||||||.|...:|..:|.||       |.||:.|    ||:..|..|....|:|
Zfish  1115 IRFFDVTPLGQILNRFSADTNIIDQHIPPTLESLTRSTLLCLSAI----GVIAFVTPAFLIALVP 1175

  Fly   923 AAIIGVILGMIRYLYVNTSRSVKRLESISRSPVFSLTNQTFQGLTTIRALQAQSALEQEFHEYQN 987
            .|:....:.  :|..| .|:.::.|:..::.|:....::|.:|||||||.:.::..:|...|..:
Zfish  1176 LAVAFYFIQ--KYFRV-ASKDLQELDDSTQLPLLCHFSETAEGLTTIRAFRHEARFKQRMLELTD 1237

  Fly   988 TNTSAWFLFLSCTRAFALWSDVL-CIVYMTAVTFSFLLLKDEFDSGDVGLAILHSTTMTGMCQWG 1051
            ||.:|:....:..|...:.:|.| .::.:||...:   :.....||.|||.:.::.|:|....|.
Zfish  1238 TNNTAYLFLSAANRWLEVRTDYLGAVIVLTAAVAA---IWSTSPSGLVGLGLTYALTLTNYLNWV 1299

  Fly  1052 MRQTAELENQMTSVERVLEYTEQPSEALLETPEKFKPKSEWPSKGRIEFINFKLRYSPKEAPVLK 1116
            :|..|:||.||.:|::|..:....||....:.:..:...:||..|.|...:..:||.....||||
Zfish  1300 VRNLADLEVQMAAVKKVNSFLSTESENYEGSMDVSQVPEDWPQHGEITIHDLCVRYDSMLKPVLK 1364

  Fly  1117 DLNFTIEPREKIGIVGRTGAGKSSIIQSIFRLA-CNEGMIRIDDVDIEHIGLHDLRSQVSIIPQD 1180
            .:|..|.|.:|:||.||||:||||:..:.|.:. ..||.|.||.:||..:.|..|||::|||.||
Zfish  1365 HVNAHINPGQKVGICGRTGSGKSSLSLAFFNMVDVFEGKIVIDGIDICKLPLQTLRSRLSIILQD 1429

  Fly  1181 PVLFSGTLRYNLDPMDERSDEEMWKALGDVELRSYVSTLIGGLNCRMYDGGSNFSVGQRQLVCLA 1245
            ||||||::|.||||....:|:.:|:||...:|::.|..|.|||:..:.:||.|||||||||.|||
Zfish  1430 PVLFSGSIRLNLDPERTCTDDRLWEALEIAQLKNMVKALPGGLDAVVTEGGENFSVGQRQLFCLA 1494

  Fly  1246 RAILRHNKILIMDEATANVDPETDKLIQQTIRSKFAHCTVLTIAHRLHTVMDSDRVLVMDAGEVR 1310
            ||.:|.:.|||||||||::|..|:.::|:.:.:.||..||:||||.:.:::::::|||..:|.:.
Zfish  1495 RAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHLVSSILEAEQVLVFSSGILV 1559

  Fly  1311 ELGHPYELL 1319
            |......||
Zfish  1560 ENDSAINLL 1568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 420/1436 (29%)
ABC_membrane 94..360 CDD:294371 75/293 (26%)
ABCC_MRP_domain1 448..650 CDD:213217 83/233 (36%)
ABC_membrane 821..1046 CDD:294371 61/232 (26%)
ABCC_MRP_domain2 1096..1315 CDD:213211 102/219 (47%)
abcc9XP_005164758.1 CFTR_protein 223..1575 CDD:273530 418/1429 (29%)
ABC_membrane 304..591 CDD:294371 75/294 (26%)
ABCC_SUR1_N 678..907 CDD:213257 83/232 (36%)
ABC_membrane 1045..1300 CDD:294371 76/288 (26%)
ABCC_SUR2 1269..1583 CDD:213255 124/303 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586006
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.650

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