DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdog and CG7627

DIOPT Version :9

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_001245943.1 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster


Alignment Length:1375 Identity:602/1375 - (43%)
Similarity:863/1375 - (62%) Gaps:69/1375 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PKNPFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFAELWEDELKRS-- 73
            |:||....||.|...||:....|.:|.:..|..::||:..|...||.:.||....||.||:::  
  Fly    10 PENPREHCNFISAACFWYTMPTFIKGRKRTLDTKDLYRALKEHKSETLGNKLCASWELELEKTKG 74

  Fly    74 NPSVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLGGLVGYFATNQTDISENTAYLYAMGIV 138
            .|:::|.:||.:|..|..:||...:.|...::|.|:||..|:.|:......|  .:||.||.|::
  Fly    75 KPNLLRALLRVFGWYFALLGLVLFLLELGLRTLQPIFLLKLIAYYTHGSESI--ESAYYYAAGVI 137

  Fly   139 ICMLVPVITFHPFIFYIFQVGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRAINILSNDLGRFDV 203
            :|..:.||..||::.....||.|:|:.:..:||||.|::|||:..|...|..:|::|||:||.|:
  Fly   138 LCSALNVIIMHPYMLGTMHVGLKMRVGMCSMIYRKALRLSKSALGDTTAGHVVNLMSNDVGRLDL 202

  Fly   204 ALCFLHDTWKGPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTAERTDMR 268
            |..|:|..|.||:|::.|.:||||||||:||.||:|||.||||||:..|:.:..|..||.|||.|
  Fly   203 ATIFVHYLWVGPLETLFITYLMYREIGIAAVFGVAFMLLFIPLQAYLGKRTSVLRLRTALRTDER 267

  Fly   269 VKLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYIHA-ALGCTSMISPLSVFLALC 332
            |::|||||.|||||||||||..|..::|..|.||:.|||..:||.. .|.....::.:|:||:|.
  Fly   268 VRMMNEIISGIQVIKMYAWELPFEHMVAFARKKEINAIRHVSYIRGILLSFIIFLTRVSIFLSLV 332

  Fly   333 SYVYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLLDGDKAEVPINL 397
            .||.||..||.:..:.:::|:|:|..:|..|:|..|:.:||.|||.||.:.::...:...:.:::
  Fly   333 GYVLLGTFLTPEVAFLITAYYNILRTTMTVFFPQGISQMAETLVSIKRVQKYMQSDETNVMDMSV 397

  Fly   398 EANQQ-TGKNKRKISKKDKQKNVELNGSLLSN--GQVHHNRLRDYDPEATKKCVVLKNVSASWDT 459
            :..:. .|.|:..:.....::..|....||..  ..|:.|      .:.::..:.:..:.|.||.
  Fly   398 DLTEDFQGSNQETVHADGDEERDEAEDKLLGPPIATVNEN------AKLSEAGISISGLMAKWDV 456

  Fly   460 SDGHANCAIEDFSTD-----IKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVHGKISYAS 519
            :.       .|:|.:     ::..|:..:||..|:||||.:..:|||:..:.||..|:|.:||||
  Fly   457 NS-------PDYSLNGVNLRVQPGTMLGIVGRTGSGKSSLIQAILGELPAESGEIKVNGSMSYAS 514

  Fly   520 QESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKARVS 584
            ||.|:|.||:|.||:|.:..:.|||.||||.|.||||.||||..|.|:|||||.|||||||||:|
  Fly   515 QEPWLFSGTVRQNILFGQPMDRRRYAKVVKKCALERDFELLPFKDKTIVGERGASLSGGQKARIS 579

  Fly   585 LARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCIRDFLSNKIRILVTHQVQYLFDVEHLLLMGSG 649
            |||||||:..|||||||||||||||.:|:|::|:|.:|..:|.||.|||:|:|...:.:::|..|
  Fly   580 LARAVYRETSIYLLDDPLSAVDTHVARHLFEQCMRGYLRERIVILATHQLQFLQHADQIVIMDKG 644

  Fly   650 KIMAQGSYQELQRS-----------RQFQFLEQTQHDESGIDTHSVSSYLSRSDSEKSMEHQHNQ 703
            ::.|.|:|:.|:.|           .:.:..|:.....||..|||.|.  .|.:||:|:      
  Fly   645 RVSAVGTYESLRESGLDFASMLADPERDEQSEERSRSRSGSYTHSHSD--QRRNSEQSL------ 701

  Fly   704 LLRPDEHVEDV------NQEQQTVGSIKMHVYASYIKALDSTFLLGIVISLFVCARIMLTGVDYF 762
            |...|..::|:      |||:|..|.|.:.:|:.|.||....|...:::...|.::.:.:..|||
  Fly   702 LSMADSCMDDLEAEQANNQERQEAGQIGLRLYSKYFKAGGGFFAFFVMMGFCVLSQGLASLGDYF 766

  Fly   763 LSRWVIWEEQIAVNRTTTLLNETDTTIANDTLPINATDPYIAPLLASDIQAGIRQELV--LFYAT 825
            ||.||..:..:|.....           |||......:|.::..| .||...:..|::  ..:..
  Fly   767 LSYWVTKKGNVAYRADN-----------NDTTRSEELEPRLSTWL-RDIGLSVDAEMLDTYIFTV 819

  Fly   826 ILGATLIVYLIRTFGFFKMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTD 890
            |...|::|.:.|:|.||.:.::.|:.||:.:|||||||:|||||||.|||||||||||:..||..
  Fly   820 ITVLTILVTVARSFLFFNLAMKASIRLHNSMFRGITRAAMYFFNTNPSGRILNRFSKDMGQVDEI 884

  Fly   891 LPHTLLDCLAFIIDVSGVVIIVAIANYWLLIPAAIIGVILGMIRYLYVNTSRSVKRLESISRSPV 955
            ||..::|.:...:.::|:||::|:.|...|||..::|:|...:|..|:.|||.|||:|:|:||||
  Fly   885 LPAVMMDVIQIFLALAGIVIVIAVVNPLFLIPTVVLGIIFYQLRTFYLKTSRDVKRMEAITRSPV 949

  Fly   956 FSLTNQTFQGLTTIRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDVLCIVYMTAVTF 1020
            :|....:..||:||||..||..||.||..||:.::||:::|:|.:|||..|.|..|::|:..:|.
  Fly   950 YSHLAASLTGLSTIRAFGAQRVLEAEFDNYQDMHSSAFYMFISTSRAFGYWLDCFCVIYIAIITL 1014

  Fly  1021 SFLLLKDEFDSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEYTEQPSEALLETPEK 1085
            ||.:.... :.|||||||..:..||||.||||||:|||||.||:||||:||.:...|..||.|..
  Fly  1015 SFFIFPPA-NGGDVGLAITQAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDIEPEGALEAPAD 1078

  Fly  1086 FKPKSEWPSKGRIEFINFKLRYS--PKEAPVLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFRL 1148
            .||...||.:|:|.|....|||:  ||...|||.|:|.|:|:||:||||||||||||:|.::|||
  Fly  1079 KKPPKSWPEQGKIVFDELSLRYTPDPKSENVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRL 1143

  Fly  1149 ACNEGMIRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKALGDVELR 1213
            :.|:|.:.||..|...:|||||||::|||||:|||||||:||||||.||.||:::|::|.:|:|:
  Fly  1144 SYNDGSVLIDKRDTSEMGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDDKLWRSLEEVKLK 1208

  Fly  1214 SYVSTLIGGLNCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANVDPETDKLIQQTIRS 1278
            ..|:.|..||..::.:||:||||||||||||||||||.|:||:||||||||||:||.|||.|||:
  Fly  1209 EVVADLPSGLQSKITEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQTTIRN 1273

  Fly  1279 KFAHCTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQRTGG-YLRQLVDNTGAATSFALQ 1342
            ||..||||||||||||:||||:|||||||...|.|.|||||..... ....:|..||.||..:|.
  Fly  1274 KFKECTVLTIAHRLHTIMDSDKVLVMDAGRAVEFGTPYELLTLADSKVFHGMVKQTGHATYESLL 1338

  Fly  1343 QAAEQSYSKQ 1352
            :.|::::..:
  Fly  1339 KIAQKAFENR 1348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 600/1363 (44%)
ABC_membrane 94..360 CDD:294371 118/266 (44%)
ABCC_MRP_domain1 448..650 CDD:213217 103/206 (50%)
ABC_membrane 821..1046 CDD:294371 101/224 (45%)
ABCC_MRP_domain2 1096..1315 CDD:213211 143/220 (65%)
CG7627NP_001245943.1 CFTR_protein 12..1315 CDD:273530 593/1338 (44%)
ABC_membrane 107..360 CDD:294371 116/254 (46%)
ABCC_MRP_domain1 445..645 CDD:213217 103/206 (50%)
ABC_membrane 815..1014 CDD:294371 90/198 (45%)
ABCC_MRP_domain2 1089..1310 CDD:213211 143/220 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440888
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I246
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm14754
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - P PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X771
1110.800

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