DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdog and CG31793

DIOPT Version :9

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_609930.4 Gene:CG31793 / 326161 FlyBaseID:FBgn0051793 Length:1307 Species:Drosophila melanogaster


Alignment Length:1369 Identity:548/1369 - (40%)
Similarity:820/1369 - (59%) Gaps:94/1369 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PKNPFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFAELWEDELKR--- 72
            |.||...|...|...|.:...:..:|.:..|...:||:.....::..:.::|.:.||||:.|   
  Fly     7 PPNPRESAGILSSLMFCFALPILFKGRKQTLQPTDLYKTLNEHEAASLGDEFFQGWEDEVARCRR 71

  Fly    73 -----SNPSVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLGGLVGYFATNQTDISENTAYL 132
                 ..|||:|:|.|.:|...:..|:..:..|...::.:||.|.||:..|:.:....|.| |.:
  Fly    72 KGDSGRKPSVLRVIGRVFGWRLIMSGITIAALELGTRATVPLLLAGLISEFSEHGNGHSYN-AQI 135

  Fly   133 YAMGIVICMLVPVITFHPFIFYIFQVGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRAINILSND 197
            ||:.::.|:|..|:..||::..:..:..|:|:|:|..||||.|::|::|......|:.:|:||||
  Fly   136 YAVLLIACILASVLLTHPYMMGMMHLAMKMRVAVSSAIYRKALRLSRTSLGGTTTGQVVNLLSND 200

  Fly   198 LGRFDVALCFLHDTWKGPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTA 262
            |.|||..|...|..|.||:|.::..:.:|.:||:::..|:|.::.::|||.:.::..:..|..||
  Fly   201 LNRFDRCLIHFHFLWLGPLELLIASYFLYEQIGMASFYGISILVLYLPLQTYLSRVTSKLRLQTA 265

  Fly   263 ERTDMRVKLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYIHA-ALGCTSMISPLS 326
            .|||.||::|||||.||||||||.||:.|.::|.::|..|:.:||....:.. .|.....:..::
  Fly   266 LRTDQRVRMMNEIISGIQVIKMYTWERPFGKLIGQMRRSEMSSIRQMNLLRGILLSFEITLGRIA 330

  Fly   327 VFLALCSYVYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLLDGDKA 391
            :|::|..:|..|..|||::.:.|::::|:|..::..|:|..::..||.|||.:|..:|::     
  Fly   331 IFVSLLGFVLGGGELTAERAFCVTAFYNILRRTVSKFFPSGMSQFAELLVSMRRITNFMM----- 390

  Fly   392 EVPINLEANQQTGKNKRKISKKDKQ---KNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKNV 453
                ..|||......:|....:::|   |.||.....:..|:         :|:.   .|.:|.:
  Fly   391 ----REEANVIDMSERRDEKAEEEQHLLKEVEKRSYPVGIGK---------EPDT---LVEIKAL 439

  Fly   454 SASWDTSDGHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVHGKISYA 518
            .|.|. .:.| :..:.:.:..::...|.||:||||:||||.:..:|||:..:.|...|.||.|||
  Fly   440 RARWG-QEQH-DLVLNNVNMSLRRGQLVAVIGPVGSGKSSLIQAILGELPPESGSVQVSGKYSYA 502

  Fly   519 SQESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKARV 583
            |||.|:|..::||||:|....:::||:.|:|.|.||||:||| .||.|:|||||.||||||:||:
  Fly   503 SQEPWLFNASVRDNILFGLPMDKQRYRTVLKRCALERDLELL-HGDGTIVGERGASLSGGQRARI 566

  Fly   584 SLARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCIRDFLSNKIRILVTHQVQYLFDVEHLLLMGS 648
            .|||||||:||:|||||||||||||||:|:||.|:|.||..::.||||||:|:|.|.:.:::|..
  Fly   567 CLARAVYRRADVYLLDDPLSAVDTHVGRHLFDECMRGFLGKQLVILVTHQLQFLEDADLIVIMDK 631

  Fly   649 GKIMAQGSYQELQRSRQ--FQFLEQTQHDESGIDTHSVSSYLSRSDSEKSMEHQHNQLLRPDEHV 711
            |.:.|.|:|:|:.:|.|  .|.|.::..:..|.|....|..|||..|..|.:..:......:..|
  Fly   632 GHVSACGTYEEMLKSGQDFAQLLVESTQNSGGGDEIITSPNLSRQSSALSTKSSNGSSSSLESMV 696

  Fly   712 ED--------VNQEQQTVGSIKMHVYASYIKALDSTFLLGIVISLFVCARIMLTGVDYFLSRWVI 768
            |.        .:||.::.|.|.:.:|..|..|.....:..::|.|.:..:|:.:|.|||||.|| 
  Fly   697 EKEKPKPSAVSSQESRSGGQIGLSMYKKYFGAGCGVLVFVVLIMLCIGTQILASGGDYFLSYWV- 760

  Fly   769 WEEQIAVNRTTTLLNETDTTIANDTLPINATDPYIAPLLASDIQAGIRQELVLFYATILGATLIV 833
                             ..|.::.||.|                         :|.|.:...|::
  Fly   761 -----------------KNTASSSTLDI-------------------------YYFTAINVGLVI 783

  Fly   834 -YLIRTFGFFKMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTDLPHTLLD 897
             .|:||..||.:.:..|..||:.:|:|::|.::|||:||.||||||||:.|:..||..:|..:||
  Fly   784 CALLRTLLFFNITMHSSTELHNTMFQGLSRTALYFFHTNPSGRILNRFANDLGQVDEVMPAVMLD 848

  Fly   898 CLAFIIDVSGVVIIVAIANYWLLIPAAIIGVILGMIRYLYVNTSRSVKRLESISRSPVFSLTNQT 962
            |:...:.::|::.::.:.|.|.||....:.:.....|..|:.|||.|||||:::|||::|..:.|
  Fly   849 CIQIFLTLTGIICVLCVTNPWYLINTFAMMLAFYYWRDFYLKTSRDVKRLEAVARSPMYSHFSAT 913

  Fly   963 FQGLTTIRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDVLCIVYMTAVTFSFLLLKD 1027
            ..||.||||:.||..|..::..||:.::|.::.|:|.:|||..:.|:.|:.|:.:|.........
  Fly   914 LVGLPTIRAMGAQQTLIGQYDNYQDLHSSGYYTFVSTSRAFGYYLDLFCVAYVISVILHNFFNPP 978

  Fly  1028 EFDSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEYTEQPSEALLETPEKFKPKSEW 1092
            ..::|.:||||..:..||||.||||||:|||||.||||||||||.:...|....:|.:.:|...|
  Fly   979 LHNAGQIGLAITQALGMTGMVQWGMRQSAELENAMTSVERVLEYKDLDPEGDFNSPAEKQPPKSW 1043

  Fly  1093 PSKGRIEFINFKLRYSP-KEAP-VLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFRLACNEGMI 1155
            |.:|::...:..|||.| ..:| |||.|:|||:|.||:||||||||||||:|.::|||:.|:|.|
  Fly  1044 PKEGKLVTKDLSLRYEPDTNSPCVLKGLSFTIQPMEKVGIVGRTGAGKSSLINALFRLSYNDGAI 1108

  Fly  1156 RIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKALGDVELRSYVSTLI 1220
            .||.:|...||||||||::|||||:|||||||:||||||.::..|:::||||.||.|:..:|.|.
  Fly  1109 LIDSLDTNDIGLHDLRSKISIIPQEPVLFSGTMRYNLDPFEQYPDDKLWKALEDVHLKEEISELP 1173

  Fly  1221 GGLNCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANVDPETDKLIQQTIRSKFAHCTV 1285
            .||...:.:||:||||||||||||||||||.|:||:||||||||||:||.|||.|||:||..|||
  Fly  1174 SGLQSIISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQATIRNKFKDCTV 1238

  Fly  1286 LTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQRT-GGYLRQLVDNTGAATSFALQQAAEQSY 1349
            |||||||:|:||||:|||||||.|.|.|.|||||..: ......:|..||.|:...|.:.||.:.
  Fly  1239 LTIAHRLNTIMDSDKVLVMDAGHVVEFGSPYELLTASKAKVFHGMVMQTGKASFDHLLKVAENTK 1303

  Fly  1350 SKQI 1353
            ...|
  Fly  1304 QNHI 1307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 544/1356 (40%)
ABC_membrane 94..360 CDD:294371 92/266 (35%)
ABCC_MRP_domain1 448..650 CDD:213217 105/201 (52%)
ABC_membrane 821..1046 CDD:294371 81/225 (36%)
ABCC_MRP_domain2 1096..1315 CDD:213211 144/220 (65%)
CG31793NP_609930.4 CFTR_protein 1..1273 CDD:273530 539/1333 (40%)
ABC_membrane 112..364 CDD:294371 91/252 (36%)
ABCC_MRP_domain1 434..632 CDD:213217 105/200 (53%)
ABC_membrane 736..955 CDD:294371 85/261 (33%)
ABCC_MRP_domain2 1047..1268 CDD:213211 144/220 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455741
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I246
Isobase 1 0.950 - 0 Normalized mean entropy S1827
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm14754
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - P PTHR24223
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X771
1110.840

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