DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdog and Abcc6

DIOPT Version :9

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:XP_006541009.1 Gene:Abcc6 / 27421 MGIID:1351634 Length:1500 Species:Mus musculus


Alignment Length:1298 Identity:379/1298 - (29%)
Similarity:605/1298 - (46%) Gaps:199/1298 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RPKNPF--TKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFAELW------ 66
            :|.||.  .:|:|.|:..|||...|..||.:..|..::|:...:...||.:.::....|      
Mouse   272 QPLNPCPEAEASFPSKAMFWWASGLLWRGYKKLLGPKDLWSLGRENSSEELVSQLEREWRRSCNG 336

  Fly    67 -------------------EDELKRSNPSVVRMILRAYGKIFVPMGLAFSISETI---CKSLMPL 109
                               :.|..:..| ::|.|.|.:...|:...|:..||:..   ...|:.|
Mouse   337 LPGHKGHSSVGAPETEAFLQPERSQRGP-LLRAIWRVFRSTFLLGTLSLVISDAFRFAVPKLLSL 400

  Fly   110 FLGGLVGYFATNQTDISENTAYLYA--MGIVICMLVPVITFHPFIFYIFQVGTKLRLALSGLIYR 172
            ||..:      ...:.|..|.:|.|  |....|:.......|.:...:.|:  :||.|::||:||
Mouse   401 FLEFM------GDRNSSAWTGWLLAVLMFAAACLQTLFEQQHMYRAKVLQM--RLRTAITGLVYR 457

  Fly   173 KVLQVSKSSSNDGLRGRAINILSNDLGRFDVALCFLHDTWKGPMESILIGFLMYREIGISAVIGV 237
            |||.:|..|......|..:|::|.|:.|...::.:|:..|...:...:....:::.:|.||:..|
Mouse   458 KVLVLSSGSRKSSAAGDVVNLVSVDIQRLAESIIYLNGLWLLFLWIFVCFVYLWQLLGPSALTAV 522

  Fly   238 SFMLSFIPLQAWAAKKAAYYRQMTAERTDMRVKLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKE 302
            :..||.:||..:..||..::::....:...|.:|.:.:::.::.||.:.||.:|...:..:|.:|
Mouse   523 AVFLSLLPLNFFITKKRGFHQEEQMRQKASRARLTSSMLRTVRTIKSHGWEHAFLERLLHIRGQE 587

  Fly   303 VKAIRGTAYIHAALGCTSMIS-PLSVFL------ALCSYVYLGDPLTAQKVYTVSSYFNMLNDSM 360
            :.|::.:..:.:    .|::| .:|.||      |:.:.|...:.:.|:|.:...:..::||.:.
Mouse   588 LSALKTSTLLFS----VSLVSFQVSTFLVALVVFAVHTLVAEDNAMDAEKAFVTLTVLSILNKAQ 648

  Fly   361 VTFWPMSITFIAEALVSAKRCKDFLLDGDKAEVPINLEANQQTGKNKRKISKKDKQKNVELNGSL 425
             .|.|.|:..|.:|.||..|...||.          ||                   .|:.||.:
Mouse   649 -AFLPFSVHCIVQARVSFDRLAAFLC----------LE-------------------EVDPNGMI 683

  Fly   426 LSNGQVHHNRLRDYDPEATKKCVVLKNVSASWDTSDGHANCAIEDFSTDIKDQTLAAVVGPVGAG 490
            .||.:           .::|..:.:.|.:.:|  |.....| :...:..:....|.|||||||||
Mouse   684 ASNSR-----------RSSKDRISVHNGTFAW--SQESPPC-LHGINLTVPQGCLLAVVGPVGAG 734

  Fly   491 KSSFLNVLLGEVGIDKGEAMVHGKISYASQESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLER 555
            |||.|:.||||:...:|...:.|.::|..||:||...::.:|:.|.::.:....:||:..|.|..
Mouse   735 KSSLLSALLGELLKVEGSVSIEGSVAYVPQEAWVQNTSVVENVCFRQELDLPWLQKVLDACALGS 799

  Fly   556 DMELLPRGDLTVVGERGVSLSGGQKARVSLARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCI-- 618
            |:...|.|..|.:||:|::||||||.|:|||||||:||.||||||||:|:|.||.:.:|.:.|  
Mouse   800 DVASFPAGVHTPIGEQGMNLSGGQKQRLSLARAVYKKAAIYLLDDPLAALDAHVSQQVFKQVIGP 864

  Fly   619 RDFLSNKIRILVTHQVQYLFDVEHLLLMGSGKIMAQGSYQE-LQRSRQFQFLEQTQHDESGIDTH 682
            ...|....||||||.:..|...:.:|::.:|.|...||||: |||:.....|.......:|....
Mouse   865 SGLLQGTTRILVTHTLHVLPQADRILVLANGTIAEMGSYQDLLQRNGALVGLLDGARQPAGTHDA 929

  Fly   683 SVSSYL-------------------------SRSDSEKSMEHQHNQLLRPDEHVEDVNQEQQTV- 721
            :.|..|                         .||.||..||...:     |.....:..|:.:| 
Mouse   930 ATSDDLGGFPGGGRPTCRPDRPRPTEAAPVKGRSTSEVQMEASLD-----DPEATGLTAEEDSVR 989

  Fly   722 -GSIKMHVYASYIKALDSTFLLGIVISLFVCARIMLTGVDYFLSRWVIWEEQIAVNRTTTLLNET 785
             |.:|..:|.||::|: .|.|....:.||:|.::......|:||.|                   
Mouse   990 YGRVKTTIYLSYLRAV-GTPLCTYTLFLFLCQQVASFSQGYWLSLW------------------- 1034

  Fly   786 DTTIANDTLPINATDPYIAPLLASDIQAGIRQELVLFYATILGATLIVYLIRTFGFFKMCLRISL 850
                        |.||.:.   ...:.|.:|       ..:.|   ::..::..|.|.....:.|
Mouse  1035 ------------ADDPVVD---GRQMHAALR-------GWVFG---LLGCLQAIGLFASMAAVFL 1074

  Fly   851 ---HLHDRLFRG----ITRASMYFFNTNSSGRILNRFSKDIRTVDTDLPHTLLDCLAFIIDVSGV 908
               .....|||.    :.|:.:.||.....|.:||||||:..|||.|:|..|...|.:...:..|
Mouse  1075 GGARASGLLFRSLLWDVARSPIGFFERTPVGNLLNRFSKETDTVDVDIPDKLRSLLTYAFGLLEV 1139

  Fly   909 VIIVAIANYWLLIPAAIIGVILGMIRY-----LYVNTSRSVKRLESISRSPVFSLTNQTFQGLTT 968
            .:.|.:|.     |.||:.::..|:.|     |||.||..::||||...|.|.|...:||||...
Mouse  1140 GLAVTMAT-----PLAIVAILPLMVLYAGFQSLYVATSCQLRRLESARYSSVCSHMAETFQGSLV 1199

  Fly   969 IRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDVL--CIVYMTAVTFSFLLLKDEFDS 1031
            :||.:||::...:.....:.|....|..|...|..|...::|  .:|::.|.  ..:|.|....:
Mouse  1200 VRAFRAQASFTAQHDALMDENQRVSFPKLVADRWLATNLELLGNGLVFVAAT--CAVLSKAHLSA 1262

  Fly  1032 GDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEYTEQPSEALLETPEKFKPKSEWPSKG 1096
            |.||.::..:..:|...||.:|...:|||.|.:||||.:|...|.||....| ....:..||..|
Mouse  1263 GLVGFSVSAALQVTQTLQWVVRSWTDLENSMVAVERVQDYARIPKEAPWRLP-TCAAQPLWPCGG 1326

  Fly  1097 RIEFINFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFRL-ACNEGMIRIDDV 1160
            :|||.:|.||:.|:....::.::..|...||:||||||||||||:...:.|| ...||.|.||.|
Mouse  1327 QIEFRDFGLRHRPELPLAVQGVSLKIHAGEKVGIVGRTGAGKSSLAWGLLRLQEAAEGNIWIDGV 1391

  Fly  1161 DIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKALGDVELRSYVSTLIGGL 1223
            .|.|:|||.|||:::|||||||||.|:||.|||.:.|.:||.:|.||..|:|:::|::|.|.|
Mouse  1392 PITHVGLHTLRSRITIIPQDPVLFPGSLRMNLDLLQEHTDEGIWAALETVQLKAFVTSLPGQL 1454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 378/1296 (29%)
ABC_membrane 94..360 CDD:294371 65/277 (23%)
ABCC_MRP_domain1 448..650 CDD:213217 81/203 (40%)
ABC_membrane 821..1046 CDD:294371 65/238 (27%)
ABCC_MRP_domain2 1096..1315 CDD:213211 66/129 (51%)
Abcc6XP_006541009.1 MRP_assoc_pro 101..1465 CDD:188098 379/1298 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841726
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.740

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