Sequence 1: | NP_651678.1 | Gene: | rdog / 43450 | FlyBaseID: | FBgn0039644 | Length: | 1374 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006236159.1 | Gene: | Cftr / 24255 | RGDID: | 2332 | Length: | 1530 | Species: | Rattus norvegicus |
Alignment Length: | 1513 | Identity: | 416/1513 - (27%) |
---|---|---|---|
Similarity: | 702/1513 - (46%) | Gaps: | 273/1513 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 RTRRKV----VRPKNPFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFA 63
Fly 64 ELWE-DELKRSNPSVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLGGLVGYFATNQTDISE 127
Fly 128 NTAYLYAMGIVICML--VPVITFHPFIFYIFQVGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRA 190
Fly 191 INILSNDLGRFDVALCFLHDTWKGPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAA 255
Fly 256 YYRQMTAERTDMRVKLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYIHAALGCTS 320
Fly 321 MISP-LSVFLALCSYVYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDF 384
Fly 385 LLDGDKAEVPINLEANQQTGKNKRKISKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVV 449
Fly 450 LKNVSASWD------------------TSDGH-----------ANCAIEDFSTDIKDQTLAAVVG 485
Fly 486 PVGAGKSSFLNVLLGEVGIDKGEAMVHGKISYASQESWVFEGTIRDNIVFVEDYNERRYKKVVKV 550
Fly 551 CGLERDMELLPRGDLTVVGERGVSLSGGQKARVSLARAVYRKADIYLLDDPLSAVDTHVGKHIFD 615
Fly 616 RCIRDFLSNKIRILVTHQVQYLFDVEHLLLMGSGKIMAQGSYQELQRSR-QFQ--------FLEQ 671
Fly 672 TQHDESGIDTHSV------------------------------SSYLSRSDSEK----------S 696
Fly 697 MEHQHNQL------LRPD-EHVEDV---------------------------------NQEQQTV 721
Fly 722 GSIKMHVYASYIK-----------ALDST-----------------------------------F 740
Fly 741 LL--GIVISLFVCARIMLTGVDYFLSRWVIWEEQIAVNRTTTLLNETDTTIANDTLPINATDPYI 803
Fly 804 APLLASDIQAGIRQELVLFYATILGATLIVYLIRTFGFFKMCLRISLHLHDRLFRGITRASMYFF 868
Fly 869 NTNSSGRILNRFSKDIRTVDTDLPHTLLDCLAFIIDVSGVVIIV-AIANYWLL--IPAAIIGVIL 930
Fly 931 GMIRYLYVNTSRSVKRLESISRSPVFSLTNQTFQGLTTIRALQAQSALEQEFHEYQNTNTSAWFL 995
Fly 996 FLSCTRAFALWSDVLCIVYMTAVTFSFLLLKDEFDSGDVGLAILHSTTMTGMCQWGMRQTAELEN 1060
Fly 1061 QMTSVERVLEY------------------TEQPSEALLETPEKFKPKSEWPSKGRIEFINFKLRY 1107
Fly 1108 SPKEAPVLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFRLACNEGMIRIDDVDIEHIGLHDLRS 1172
Fly 1173 QVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKALGDVELRSYVSTLIGGLNCRMYDGGSNFSVG 1237
Fly 1238 QRQLVCLARAILRHNKILIMDEATANVDPETDKLIQQTIRSKFAHCTVLTIAHRLHTVMDSDRVL 1302
Fly 1303 VMDAGEVRELGHPYELLQ 1320 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rdog | NP_651678.1 | CFTR_protein | 12..1343 | CDD:273530 | 413/1500 (28%) |
ABC_membrane | 94..360 | CDD:294371 | 73/268 (27%) | ||
ABCC_MRP_domain1 | 448..650 | CDD:213217 | 86/230 (37%) | ||
ABC_membrane | 821..1046 | CDD:294371 | 71/227 (31%) | ||
ABCC_MRP_domain2 | 1096..1315 | CDD:213211 | 80/218 (37%) | ||
Cftr | XP_006236159.1 | CFTR_protein | 55..1518 | CDD:273530 | 413/1502 (27%) |
ABC_membrane | 139..357 | CDD:294371 | 65/221 (29%) | ||
ABCC_CFTR1 | 444..724 | CDD:213258 | 99/297 (33%) | ||
CFTR_R | 693..898 | CDD:291094 | 29/204 (14%) | ||
ABC_membrane | 915..1196 | CDD:279056 | 86/303 (28%) | ||
P-loop_NTPase | 1258..1518 | CDD:304359 | 84/225 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166345090 | |
Domainoid | 1 | 1.000 | 58 | 1.000 | Domainoid score | I10508 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D138195at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24223 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.950 |