DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdog and Abcc8

DIOPT Version :10

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:XP_036008753.1 Gene:Abcc8 / 20927 MGIID:1352629 Length:1597 Species:Mus musculus


Alignment Length:1487 Identity:435/1487 - (29%)
Similarity:717/1487 - (48%) Gaps:269/1487 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RTRRKVVRPKN----------PFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSER 57
            :|.|:|..|::          ||  .|..|:.::|||....|..            |||.:|...
Mouse   199 KTPREVKPPEDLQDLGVRFLQPF--VNLLSKGTYWWMNAFIKTA------------HRKPIDLRA 249

  Fly    58 V----------TN--KFAELWEDELKRSNPS------VVRMILRAYGKIFVPMGLAFSISETICK 104
            :          ||  :....::.:.::...|      :.|.:..|:|:..| :...|.|...:..
Mouse   250 IGKLPIAMRALTNYQRLCAAFDAQARKDTQSQQGARAIWRALCHAFGRRLV-LSSTFRILADLLG 313

  Fly   105 SLMPLFLGGLVG------------------YFATNQTDISENTAYLYAMGIVICMLVPVITFHPF 151
            ...||.:.|:|.                  ||.::|..:  ..||:.|:.:.:.:|:. .||...
Mouse   314 FAGPLCIFGIVDHLGKENHVFQPKTQFLGVYFVSSQEFL--GNAYVLAVLLFLALLLQ-RTFLQA 375

  Fly   152 IFYI-FQVGTKLRLALSGLIYRKVLQVSKSSSNDG--LRGRAINILSNDLGRFDVALCFLHDTWK 213
            .:|: .:.|..||.|:...||.|::.:|.|:.:.|  ..|:..|:::.|..:.........:.|.
Mouse   376 SYYVAIETGINLRGAIQTKIYNKIMHLSTSNLSMGEMTAGQICNLVAIDTNQLMWFFFLCPNLWA 440

  Fly   214 GPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTAERTDMRVKLMNEIIQG 278
            .|::.|:...|:|..:|:||:||.:.::...|:|.:.|.|.:..::.|.|.::.|:|..||:::|
Mouse   441 MPVQIIVGVILLYYILGVSALIGAAVIILLAPVQYFVATKLSQAQRSTLEYSNERLKQTNEMLRG 505

  Fly   279 IQVIKMYAWEKSFARVIAEVRLKEVKAIRGTA-------YIHAALGCTSMI-------------- 322
            |:::|:||||..|...:...|.||:.::|..|       :::.|:...:::              
Mouse   506 IKLLKLYAWENIFCSRVEMTRRKEMTSLRAFAVYTSISIFMNTAIPIAAVLITFVGHVSFFKESD 570

  Fly   323 -SPLSVFLALCSYVYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLL 386
             ||...|.:|..:..|..||     :.:||.               :....:||||.::..:||.
Mouse   571 FSPSVAFASLSLFHILVTPL-----FLLSSV---------------VRSTVKALVSVQKLSEFLS 615

  Fly   387 DGDKAE---VPINLEANQQTGK---------NKRKISKKDKQKNVELNGSLLSNGQVHHNRLR-D 438
            ..:..|   .|.......|.||         |:::.::::.:   :|.|.|        .||. .
Mouse   616 SAEIREEQCAPREPAPQGQAGKYQAVPLKVVNRKRPAREEVR---DLLGPL--------QRLTPS 669

  Fly   439 YDPEATKKCVVLKNVSASWDTSDGHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEV- 502
            .|.:|...||.:.....:| |.||..  .:.:.:..|....|..:||.||.||||.|...|||: 
Mouse   670 MDGDADNFCVQIIGGFFTW-TPDGIP--TLSNITIRIPRGQLTMIVGQVGCGKSSLLLATLGEMQ 731

  Fly   503 ----------------GID----------------KGEAMVHGKISYASQESWVFEGTIRDNIVF 535
                            |.|                ..:|...|.::||||:.|:...|:.:||.|
Mouse   732 RVSGAVFWNSSLPDSEGEDPRYCLRTSNPERETAADSDARSRGPVAYASQKPWLLNATVEENITF 796

  Fly   536 VEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKARVSLARAVYRKADIYLLDD 600
            ...:|::|||.|::.|.|:.|:::||.||.|.:||||::|||||:.|:|:|||:|:..::..|||
Mouse   797 ESPFNKQRYKMVIEACSLQPDIDILPHGDQTQIGERGINLSGGQRQRISVARALYQHTNVVFLDD 861

  Fly   601 PLSAVDTHVGKHIFDRCIRDFLSNKIR--ILVTHQVQYLFDVEHLLLMGSGKIMAQGSYQELQRS 663
            |.||:|.|:..|:....|.:.|.:..|  :||||::|||...:.::.|..|.|..:|:.::.|||
Mouse   862 PFSALDVHLSDHLMQAGILELLRDDKRTVVLVTHKLQYLPHADWIIAMKDGTIQREGTLKDFQRS 926

  Fly   664 RQFQFLEQ----TQHDESGIDTHSVSSYLSRSDSE---KSMEHQHNQLLRPDEHVEDV--NQEQQ 719
             :.|..|.    ....:..::..:|....:...|:   ::|..:...||..||..|:.  ::|..
Mouse   927 -ECQLFEHWKTLMNRQDQELEKETVMERKAPEPSQGLPRAMSSRDGLLLDEDEEEEEAAESEEDD 990

  Fly   720 TVGSIKMHVYA-----SYIKALDSTFLLGIVISLFVCARIM----LTGVDYFLSRWVIWEEQIAV 775
            .:.|: :|..|     :..|.|.|..:|  ::||.|.::::    |..:||:|::|         
Mouse   991 NLSSV-LHQRAKIPWRACTKYLSSAGVL--LLSLLVFSQLLKHMVLVAIDYWLAKW--------- 1043

  Fly   776 NRTTTLLNETDTTIANDTLPINATDPYIAPLLASDIQAGIRQELVL---FYATI------LGATL 831
                     ||:.:.            ::|...:   ..:.||..|   .||.:      ||..|
Mouse  1044 ---------TDSALV------------LSPAARN---CSLSQECALDQSVYAMVFTVLCSLGIAL 1084

  Fly   832 IVYLIRTFGFFKMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTDLPHTLL 896
            .  |:.:.......|:::..||..|...|..|.|.||.|...|.||||||.|..|:|..:|.| |
Mouse  1085 C--LVTSVTVEWTGLKVAKRLHRSLLNRIILAPMRFFETTPLGSILNRFSSDCNTIDQHIPST-L 1146

  Fly   897 DCL--AFIIDVSGVVIIVAIANYWL--LIPAAIIGVILGMIRYLYVNTSRSVKRLESISRSPVFS 957
            :||  :.::.||.:.:|..:...:|  |:|.|::...:.  :|..| .||.:::|:..::.|:.|
Mouse  1147 ECLSRSTLLCVSALTVISYVTPVFLVALLPLAVVCYFIQ--KYFRV-ASRDLQQLDDTTQLPLLS 1208

  Fly   958 LTNQTFQGLTTIRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDV------------- 1009
            ...:|.:|||||||.:.::..:|:..||.::|..| .|||:....   |.:|             
Mouse  1209 HFAETVEGLTTIRAFRYEARFQQKLLEYTDSNNIA-SLFLTAANR---WLEVRMPGPAAVLPQEY 1269

  Fly  1010 --LCIVYMTAVTFSFLLLKDEFDSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERV--LE 1070
              .|:|.:.|.|.....|..|..:|.|||.:.::..::....|.:|..|::|.|:.:|:|:  |.
Mouse  1270 IGACVVLIAAATSISNSLHRELSAGLVGLGLTYALMVSNYLNWMVRNLADMEIQLGAVKRIHTLL 1334

  Fly  1071 YTEQPSEALLETPEKFKPKSEWPSKGRIEFINFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTG 1135
            .||..|...|..|... ||: ||.:|:|:..|..:||.....||||.:|..|.|.:||||.||||
Mouse  1335 KTEAESYEGLLAPSLI-PKN-WPDQGKIQIQNLSVRYDSSLKPVLKHVNALIAPGQKIGICGRTG 1397

  Fly  1136 AGKSSIIQSIFRLA-CNEGMIRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERS 1199
            :||||...:.||:. ..||.|.||.:||..:.||.|||::|||.|||||||||:|:||||..:.|
Mouse  1398 SGKSSFSLAFFRMVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCS 1462

  Fly  1200 DEEMWKALGDVELRSYVSTLIGGLNCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANV 1264
            |..:|:||...:|:..|..|.|||:..:.:||.|||.|||||.|||||.:|...|.|||||||::
Mouse  1463 DSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASI 1527

  Fly  1265 DPETDKLIQQTIRSKFAHCTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQR 1321
            |..|:.::|:.:.:.||..||:|||||:||::.:|.|:|:..|.:.|...|.:||.:
Mouse  1528 DMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVMVLKRGAILEFDKPEKLLSQ 1584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 MRP_assoc_pro 14..1323 CDD:188098 431/1466 (29%)
Abcc8XP_036008753.1 MRP_assoc_pro 224..1594 CDD:188098 428/1460 (29%)

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