DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdog and mrp-4

DIOPT Version :9

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_509658.1 Gene:mrp-4 / 181202 WormBaseID:WBGene00003410 Length:1573 Species:Caenorhabditis elegans


Alignment Length:1476 Identity:462/1476 - (31%)
Similarity:712/1476 - (48%) Gaps:269/1476 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RPKNPFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFAELWEDELKRSN 74
            |..:|.|.::|.::.:.||...|...|::.||...:||...:...|..:..|:..||:.:.|:..
 Worm   214 RNPSPETTSSFLNRITMWWFNSLCSLGVKKPLEVSDLYSLNEADTSNLLVPKWYNLWDKQSKKFE 278

  Fly    75 PSVVRMILRA--------------------------YGKIFVPMG--------------LAFS-- 97
            .:..|..:.:                          ||.  ||.|              |.|.  
 Worm   279 ETAARRRIGSNASRTNRRRTSSNDTTPLLNDQSTDDYGS--VPAGQSTQKMPSIIWTLFLMFKWD 341

  Fly    98 -ISETICKSLM-------PLFLGGLVGYFATNQTDISENTAYLYAMGIVICM-------LVPVIT 147
             |:....|.|.       ||.|..|:.:     |:..|...:   .|:|:..       |..::.
 Worm   342 VITAMFVKLLSDVLLFCNPLLLKSLIRF-----TEELERPMW---QGVVLAFTMFFSAELSSILL 398

  Fly   148 FHPFIFYIFQVGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRAINILSNDLGRFDVALCFLHDTW 212
            .| :.:.:::|||:::..|:..:|||.|::|.::..:...|..:|:::.|:.||..........|
 Worm   399 SH-YFYLMYRVGTRVQTCLTAAVYRKTLRLSNAARREKTVGEIVNLMAIDVDRFQQITPQTMQYW 462

  Fly   213 KGPMESILIGFLMYREIGISAVIGVSFMLSFIP--------LQAWAAKKAAYYRQMTAERTDMRV 269
            ..|.:..|..||:::::|:|...||:.|:...|        ::.|...: .||:       |.|.
 Worm   463 SNPFQIGLALFLLFQQLGVSVFSGVAVMVLLFPINFVITMIIRKWQIAQ-MYYK-------DERT 519

  Fly   270 KLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYIHAALGCTSMISPLSVFLA-LCS 333
            |::||::.||:|||:||||....:||.::|.:|:..|:..|::.......:..||..|.|: ..:
 Worm   520 KMVNEVLNGIKVIKLYAWEPPMEQVIEDLREQELGLIKKAAFLRTFSDMLNTASPFLVALSTFAT 584

  Fly   334 YVYLGDP---LTAQKVYTVSSYFNMLNDSMVTFWPMS-----ITFIAEALVSAKRCKDFLLDGDK 390
            ::|: ||   ||.:..:...:.||.|..      |||     ||...:.:||.:|.|:||:..: 
 Worm   585 FIYI-DPKNVLTPEIAFVSLTLFNQLRS------PMSQVAELITQTVQVVVSNRRLKEFLVSEE- 641

  Fly   391 AEVPINLEANQQTGKNKRKISKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKNVSA 455
                :|:||                               :.| |.||     ....:.||....
 Worm   642 ----LNVEA-------------------------------IDH-RARD-----NNDVICLKEACL 665

  Fly   456 SWDTSDGHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVHGKISYASQ 520
            ||::::......:.:.|..:....|..:||.|||||||.|..|:||:....|...:||::.|..|
 Worm   666 SWESAEHQPVPTLTNISFSVNRGQLVTIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQ 730

  Fly   521 ESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKARVSL 585
            :.|:...|:|.||.|.:.::|..|.:|:..|.|.||:::||.||.|.:||:|::||||||||:||
 Worm   731 QPWMQNNTLRQNITFGKQFDEYFYSRVLDACALYRDLQILPLGDNTEIGEKGINLSGGQKARISL 795

  Fly   586 ARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCI--RDFLSNKIRILVTHQVQYLFDVEHLLLMGS 648
            |||||:..||||||||:||||.|||..:|...|  ...|.||.|||||:::.:|...:.:::|..
 Worm   796 ARAVYQNHDIYLLDDPMSAVDAHVGSQLFGSVIGPEGMLRNKTRILVTNELSFLEKSDLIIVMNE 860

  Fly   649 GKIMAQGSYQELQRSRQFQFL-------------------EQTQHDESG---------------- 678
            |||...|.|.:|.:...|:.|                   |..::.|.|                
 Worm   861 GKIEYSGKYDDLMQQGAFEQLLIECEKEERERREAEASADEDDENSEPGGIMIGGDSDFEYDDDV 925

  Fly   679 -----ID-----TH--SVSSYLSRSDSEKSMEHQHNQLLRPDEHVEDVNQ-----------EQQT 720
                 ||     :|  :||..::|.....|...|..:|.....|...:..           |:..
 Worm   926 MASPIIDHVLGTSHMSTVSGIINRRRISTSTHKQRRRLSTTKSHTHSITSASTQTRQLTGTERVE 990

  Fly   721 VGSIKMHVYASYIKALDST----FLLGIVISLFVCARIMLTGVDYFLSRWVIWEEQIAVNRTTTL 781
            .|.:||..|..|..|:..:    |:||:..|     .|...|.:.:|:.|               
 Worm   991 TGRVKMDTYYKYFGAMGMSIAVLFVLGMTTS-----TIFSMGRNLWLTDW--------------- 1035

  Fly   782 LNETDTTIANDTLPINATDPYIAPLLASDIQAGIRQELVLFYATILGATLIVYLIRTFGFFKMCL 846
                    :||....:.::....|:.   |:.|:       ||.:..:.:|:..|.........:
 Worm  1036 --------SNDNAARSGSNTTGQPIA---IRLGV-------YAGLGFSEIILLFIGMLSLLYGGV 1082

  Fly   847 RISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTDLPHTL---LDCLAFIIDVSGV 908
            ..|.:||..|.|.:.|..|.|::|...||||||..|||.|||..||..:   ..||..::....:
 Worm  1083 SASRNLHAPLMRNLFRVPMAFYDTTPFGRILNRIGKDIETVDVLLPFNVQFFAQCLLQVVSTLII 1147

  Fly   909 VIIVAIANYWLLIPAAIIGVILGMIRYLYVNTSRSVKRLESISRSPVFSLTNQTFQGLTTIRALQ 973
            ::|.......::||.::  :.|.::|| |:.|||.:||||||:|||::|..:::.||..||||..
 Worm  1148 IMISTPVFGIVIIPLSV--MYLMVMRY-YIATSRQLKRLESITRSPIYSHLSESIQGSATIRAYH 1209

  Fly   974 ------AQSALEQEFH---EYQNTNTSAWFLFLSCTRAFALWSDVLCIVYMTAVTFSFLLLKDEF 1029
                  ..|..:.:.|   .|.|...:.|   ||....|.    ..|||..:|:..:  |.:...
 Worm  1210 LVDRFCKLSETKVDSHVQCRYLNYVANRW---LSVRLEFI----GNCIVLFSALFAA--LTRTTT 1265

  Fly  1030 DSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEYTEQPSEALLETPEKFKPKSEWPS 1094
            .||.:||::.::..:|.:..:.:||..:||..:.|||||.||.|..:||..::....:|...|||
 Worm  1266 TSGVIGLSVSYALNITTVLNFAVRQITKLETNIVSVERVKEYAETETEAEWKSEPGKEPPQNWPS 1330

  Fly  1095 KGRIEFINFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFR-LACNEGMIRID 1158
            :|||...|:..||.|....|:|.||..|:|.||:||||||||||||:..|:|| :...||.|.:|
 Worm  1331 EGRIVMNNYSARYRPGLNLVVKQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRIIEAAEGQIVVD 1395

  Fly  1159 DVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKALGDVELRSYVSTLIGGL 1223
            .:::..||||||||.::||||||||||||||:||||.:..||.::||.|....|:.:.:.....|
 Worm  1396 GINLAEIGLHDLRSNLTIIPQDPVLFSGTLRFNLDPFNHYSDGDIWKTLEMANLKEFATAHNEQL 1460

  Fly  1224 NCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANVDPETDKLIQQTIRSKFAHCTVLTI 1288
            |..:.:||.|.|||||||||||||:||..::||:|||||.||..||.|||:|||.:||:.|||||
 Worm  1461 NYIITEGGDNISVGQRQLVCLARALLRKTRVLILDEATAAVDVSTDALIQKTIREEFANATVLTI 1525

  Fly  1289 AHRLHTVMDSDRVLVMDAGEVRELGHPYELLQRTGGYLRQLVDNTG 1334
            ||||:|:||.||::|::.|:|.|...|..||.........:....|
 Worm  1526 AHRLNTIMDYDRIIVLNDGKVGEFDSPANLLSNRNSEFYSMAKRAG 1571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 461/1474 (31%)
ABC_membrane 94..360 CDD:294371 75/294 (26%)
ABCC_MRP_domain1 448..650 CDD:213217 87/203 (43%)
ABC_membrane 821..1046 CDD:294371 72/236 (31%)
ABCC_MRP_domain2 1096..1315 CDD:213211 123/219 (56%)
mrp-4NP_509658.1 MRP_assoc_pro 17..1572 CDD:188098 462/1476 (31%)
ABC_membrane 346..613 CDD:294371 72/290 (25%)
ABCC_MRP_domain1 658..862 CDD:213217 87/203 (43%)
ABC_membrane 1012..1259 CDD:294371 80/294 (27%)
ABCC_MRP_domain2 1332..1552 CDD:213211 123/219 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.730

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