DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdog and Abcc1

DIOPT Version :9

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_032602.1 Gene:Abcc1 / 17250 MGIID:102676 Length:1528 Species:Mus musculus


Alignment Length:1423 Identity:488/1423 - (34%)
Similarity:722/1423 - (50%) Gaps:212/1423 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVVRPKNPF--TKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFAELWEDE 69
            :.|..:||.  :.|:|.|:.:|||:..:...|.:.||...:|:...|...||.|.......|:.|
Mouse   200 ETVHDRNPCPESSASFLSRITFWWITGMMVHGYRQPLESSDLWSLNKEDTSEEVVPVLVNNWKKE 264

  Fly    70 LKRS------------------------------------------NPSVVRMILRAYGKIFVPM 92
            ..:|                                          .||:.:::.:.:|..|: |
Mouse   265 CDKSRKQPVRIVYAPPKDPSKPKGSSQLDVNEEVEALIVKSPHKDREPSLFKVLYKTFGPYFL-M 328

  Fly    93 GLAFSISETICKSLMPLFLGGLVGYFATNQTDISENTAYLYAMGIVICMLVPVITFHPFIFYIFQ 157
            ...:.....:.....|..|..::.:  .|..:..:...|.|...:.:...:..:..|.:....|.
Mouse   329 SFLYKALHDLMMFAGPKILELIINF--VNDREAPDWQGYFYTALLFVSACLQTLALHQYFHICFV 391

  Fly   158 VGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRAINILSNDLGRFDVALCFLHDTWKGPMESILIG 222
            .|.:::.|:.|.:|||.|.::.::......|..:|::|.|..||.....:::..|..|::.||..
Mouse   392 SGMRIKTAVVGAVYRKALLITNAARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILAL 456

  Fly   223 FLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTAERTDMRVKLMNEIIQGIQVIKMYAW 287
            :.::..:|.|.:.||:.|:..:||.|..|.|...|:....:..|.|:||||||:.||:|:|:|||
Mouse   457 YFLWLSLGPSVLAGVAVMILMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAW 521

  Fly   288 EKSFARVIAEVRLKEVKAIRGTAYIHAALG-----CTSMISPLSVFLALCSYVYLGDPLTAQKVY 347
            |.:|...:..:|.:|:|.::.:||: ||:|     ||..:..||.| |:...|...:.|.|:|.:
Mouse   522 ELAFQDKVMSIRQEELKVLKKSAYL-AAVGTFTWVCTPFLVALSTF-AVFVTVDERNILDAKKAF 584

  Fly   348 TVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFL----LDGDKAEVPINLEANQQTGKNKR 408
            ...:.||:|...: ...||.|:.|.:|.||.||.:.||    |:.|..|              :|
Mouse   585 VSLALFNILRFPL-NILPMVISSIVQASVSLKRLRIFLSHEELEPDSIE--------------RR 634

  Fly   409 KISKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKNVSASWDTSDGHANCAIEDFST 473
            .|      |:.|.|.                        :.:||.:.:|...:..   .:...:.
Mouse   635 SI------KSGEGNS------------------------ITVKNATFTWARGEPP---TLNGITF 666

  Fly   474 DIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVHGKISYASQESWVFEGTIRDNIVFVED 538
            .|.:..|.||||.||.||||.|:.||.|:...:|...:.|.::|..|::|:...::|:||:|...
Mouse   667 SIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVTLKGSVAYVPQQAWIQNDSLRENILFGHP 731

  Fly   539 YNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKARVSLARAVYRKADIYLLDDPLS 603
            ..|..||.|::.|.|..|:|:||.||.|.:||:||:||||||.|||||||||..:||||.|||||
Mouse   732 LQENYYKAVMEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNSDIYLFDDPLS 796

  Fly   604 AVDTHVGKHIFDRCI--RDFLSNKIRILVTHQVQYLFDVEHLLLMGSGKIMAQGSYQE-LQRSRQ 665
            |||.|||||||::.:  ...|.||.||||||.:.||..|:.:::|..|||...||||| |.|...
Mouse   797 AVDAHVGKHIFEKVVGPMGLLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLDRDGA 861

  Fly   666 F-QFLEQTQHDESGIDTHSVSSYLSRSDSE-KSME-----------HQHNQLLRPDEHVEDVNQE 717
            | :||....:.|.  |..|....:|.|..| |.:|           |....|.....|..|.:|:
Mouse   862 FAEFLRTYANAEQ--DLASEDDSVSGSGKESKPVENGMLVTDTVGKHLQRHLSNSSSHSGDTSQQ 924

  Fly   718 QQTV-----------------------GSIKMHVYASYIKALDSTFLLGIVISLFVCARIMLTGV 759
            ..::                       |.:::.||.:|:||: ..|:..:.|.||:|..:.....
Mouse   925 HSSIAELQKAGAKEETWKLMEADKAQTGQVQLSVYWNYMKAI-GLFITFLSIFLFLCNHVSALAS 988

  Fly   760 DYFLSRWVIWEEQIAVNRTTTLLNETDTTIANDTLPINATDPYIAPLLASDIQAGIRQELVLFYA 824
            :|:||.|.  ::...||.|....|                                      |..
Mouse   989 NYWLSLWT--DDPPVVNGTQANRN--------------------------------------FRL 1013

  Fly   825 TILGATLIVYLIRTFGFFKMCLRI-----SLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDI 884
            ::.||..|:.....|| :.|.:.|     |..||..|...:.|:.|.||....||.::|||||::
Mouse  1014 SVYGALGILQGAAIFG-YSMAVSIGGIFASRRLHLDLLYNVLRSPMSFFERTPSGNLVNRFSKEL 1077

  Fly   885 RTVDTDLPHTLLDCLAFIIDVSGVVIIVAIANYWLLIPAAII---GVILGMIRYLYVNTSRSVKR 946
            .|||:.:|..:...:..:..|.|.|||:.:|.   .|.|.||   |::...::..||.:||.:||
Mouse  1078 DTVDSMIPQVIKMFMGSLFSVIGAVIIILLAT---PIAAVIIPPLGLVYFFVQRFYVASSRQLKR 1139

  Fly   947 LESISRSPVFSLTNQTFQGLTTIRALQAQSALEQEFHEYQ---NTNTSAWFLFLSCTRAFALWSD 1008
            |||:|||||:|..|:|..|::.|||.:.|   |:..|:..   :.|..|::..:...|..|:..:
Mouse  1140 LESVSRSPVYSHFNETLLGVSVIRAFEEQ---ERFIHQSDLKVDENQKAYYPSIVANRWLAVRLE 1201

  Fly  1009 VL--CIVYMTAVTFSFLLLKDEFDSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEY 1071
            .:  |||...|: |: ::.:....:|.|||::.:|..:|....|.:|.::|:|..:.:|||:.||
Mouse  1202 CVGNCIVLFAAL-FA-VISRHSLSAGLVGLSVSYSLQITAYLNWLVRMSSEMETNIVAVERLKEY 1264

  Fly  1072 TEQPSEALLETPEKFKPKSEWPSKGRIEFINFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTGA 1136
            :|...||..:..|. .|.|.||..||:||.::.|||......|||.:|.|||..||:||||||||
Mouse  1265 SETEKEAPWQIQET-APPSTWPHSGRVEFRDYCLRYREDLDLVLKHINVTIEGGEKVGIVGRTGA 1328

  Fly  1137 GKSSIIQSIFRL-ACNEGMIRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSD 1200
            ||||:...:||: ...||.|.||.|:|..||||:||.:::|||||||||||:||.||||..:.||
Mouse  1329 GKSSLTLGLFRINESAEGEIIIDGVNIAKIGLHNLRFKITIIPQDPVLFSGSLRMNLDPFSQYSD 1393

  Fly  1201 EEMWKALGDVELRSYVSTLIGGLNCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANVD 1265
            ||:|.||....|:.:||.|...||....:||.|.|||||||||||||:||..|||::|||||.||
Mouse  1394 EEVWMALELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVD 1458

  Fly  1266 PETDKLIQQTIRSKFAHCTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQRTG 1323
            .|||.|||.|||::|..||||||||||:|:||..||:|:|.|||||.|.|.||||:.|
Mouse  1459 LETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVRECGAPSELLQQRG 1516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 487/1418 (34%)
ABC_membrane 94..360 CDD:294371 73/270 (27%)
ABCC_MRP_domain1 448..650 CDD:213217 92/203 (45%)
ABC_membrane 821..1046 CDD:294371 76/237 (32%)
ABCC_MRP_domain2 1096..1315 CDD:213211 134/219 (61%)
Abcc1NP_032602.1 MRP_assoc_pro 7..1527 CDD:188098 488/1423 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 876..895 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 909..929 4/19 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841654
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.660

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