DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rdog and abcc10

DIOPT Version :10

Sequence 1:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster
Sequence 2:NP_001135594.1 Gene:abcc10 / 100216149 XenbaseID:XB-GENE-6465377 Length:1501 Species:Xenopus tropicalis


Alignment Length:1348 Identity:435/1348 - (32%)
Similarity:711/1348 - (52%) Gaps:116/1348 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NFFSQWSFWWMRDLFKRGLQGPLT---DEELYQHRKTLDSERVTNKFAELWEDELKRSNPSVVRM 80
            ::.|::.:.|:..|.::|.:|.|.   |..|..|  .|.:.|:...|.       .:|:.:::|:
 Frog   229 SWLSRFFYLWLNPLLRQGARGGLKHPGDVLLLPH--CLGTARICQHFQ-------SKSSSTILRL 284

  Fly    81 I--LRA-YGKIFVPMGLAFSISETICKSLMPLFLGGLVGYFATNQTDISENTAYLYAMGIVICML 142
            :  |.| :|..:..:|| ..:.......|.||.|..||.:.......:|  ...||.:|:.....
 Frog   285 LPTLHASFGARYYALGL-LKLGAVTLAFLGPLLLNLLVNFMEAADEPLS--WGILYTLGLFSSCF 346

  Fly   143 VPVITFHPFIFYIFQVGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRAINILSNDLGRFDVALCF 207
            :..:..:.|...:.::...:|.::...:|||.::...:......:|..:|.:|.|..|.......
 Frog   347 LAALLQNQFTHEVNKLILAVRASVLTSVYRKAIRGVGTGLAGFSKGEIVNFMSTDADRISNFCRS 411

  Fly   208 LHDTWKGPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTAERTDMRVKLM 272
            .|:.|..|::..:..:|:|.::||:.:.|:...:..:|:....|.:...|........|.|||||
 Frog   412 FHEVWSLPLQFSVTLYLLYLQVGIAFLGGLGLAVLLLPINKVIANRIVDYNSDLLNHKDARVKLM 476

  Fly   273 NEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYIHAALGCTSMISPLSVFLAL---CSY 334
            .|::.|::|:|.|.|||.||..:..:|.||::::|....:.|.  |..:.:.|.|.:::   .:|
 Frog   477 TELLSGMRVVKFYTWEKHFAEAVTSLREKELRSLRALKMLDAV--CVYLWAALPVLISIITFITY 539

  Fly   335 VYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLLDGDKAEVPINLEA 399
            |.||..|||.||:|..:...||...:..| |..:..:.||.||.:|.:.|:      ::|     
 Frog   540 VLLGHQLTAAKVFTALALVGMLILPLNNF-PWVLNGVLEAKVSLERIQLFM------DLP----- 592

  Fly   400 NQQTGKNKRKISKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKNVSASW---DTSD 461
                        ::|          ||:    ::::....||.:   .:.|::.:.||   ::.|
 Frog   593 ------------EQD----------LLN----YYSQEPPADPSS---ALELRSAAFSWMPEESED 628

  Fly   462 -GHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMV-HGKI--SYASQES 522
             |.....||..|  ::...|..|||.||.||||.|..|.||:....||... |.::  .:|:||.
 Frog   629 SGSLQLFIEHLS--VQKGVLVGVVGKVGCGKSSLLAALTGELSRSGGELFASHQELGFGFAAQEP 691

  Fly   523 WVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKARVSLAR 587
            |:...|||:||:|.:::|.:.|:.|::.|.|..|:.:||.||.|.|||.||:||||||||::|||
 Frog   692 WIQFATIRENILFGKEFNGKLYQGVLEACALNDDLSILPSGDQTEVGENGVTLSGGQKARLALAR 756

  Fly   588 AVYRKADIYLLDDPLSAVDTHVGKHIFDRCIRDFLSNKIRILVTHQVQYLFDVEHLLLMGSGKIM 652
            |||:..|||||||||:|||..|..|:.::||...|.||.|||.||:.:.|...:.:|||..||::
 Frog   757 AVYQDKDIYLLDDPLAAVDADVAAHLMEKCILGILKNKTRILCTHRTELLDKADIVLLMEGGKMV 821

  Fly   653 AQGSYQEL----QRSRQFQFLEQTQHDESGIDTHSVSSYLSRSDSEKSMEHQHNQLLRPDEHVED 713
            ..|:..::    :.||......|||     ::..|.::..|..:.|:..|::.|.:   .....:
 Frog   822 GSGTPDKILPLVESSRNRGSRGQTQ-----MNHISQAAEQSLEEDEEEAENEGNPI---QPITAE 878

  Fly   714 VNQEQQTVGSIKMHVYASYIKALDSTFLLGIVISLFV--CARIMLTGVDYFLSRWVIWEEQIAVN 776
            |.||::..|::.:.||.:|.||:.......::::||:  .:|.:   .|::||.|:...:...  
 Frog   879 VGQEEKQEGAVALQVYWAYWKAVGGCLAGSVLLALFLMQASRNI---SDWWLSHWISSLQDSP-- 938

  Fly   777 RTTTLLNETDTTIANDTLPINATDPYIAPLLASDIQAGIRQEL--VLFYATILG----ATLIVYL 835
            |..:|.|.|.::..:.:|.:.:....::|:  |.:.:..:...  :.||.::.|    |..|...
 Frog   939 RNVSLTNLTPSSFPSASLLLFSQGGLVSPI--SSVHSAEKNSSLDITFYLSVYGGIAVANSIFTA 1001

  Fly   836 IRTFGFFKMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTDLPHTLLDCLA 900
            :|.|.|....:..::.:|.||...:.:|::.||::...|||:||||.|:..||..||..|...||
 Frog  1002 LRAFLFALGTVHAAVVIHRRLLSSVLQATVSFFDSTPIGRIINRFSSDLYCVDDSLPFVLNIFLA 1066

  Fly   901 FIIDVSGVVIIVAIANYWLLIPAAIIGVILGMIRYLYVNTSRSVKRLESISRSPVFSLTNQTFQG 965
            |...:.|::::::....|:|.....:.::...::..|.::||.:|||:||:.||:::..::|..|
 Frog  1067 FTFGLLGMLVMISYGLPWILPVLLPLCLLYYYLQRFYRHSSRELKRLQSITLSPIYTHFSETLTG 1131

  Fly   966 LTTIRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDV---LCIVYMTAVTFSFLLLKD 1027
            ||||||.:.....|.|.......|....|    .:.|...|.|:   :..|.:.|......:::.
 Frog  1132 LTTIRATRHADRFEAECVSRLEVNQRCMF----ASNAAVQWLDIRLQMIGVMVVAAISVIAIIQH 1192

  Fly  1028 EFDSGD---VGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEY-TEQPSEALLETPEKFKP 1088
            :..|||   ||||:.::.::||:....:....:.|..|.||||..|| |..|||:   .....:.
 Frog  1193 QRKSGDPGLVGLALSYALSITGILSGLISSFTQTEAMMVSVERTEEYSTTLPSES---AEGSLQV 1254

  Fly  1089 KSEWPSKGRIEFINFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFR-LACNE 1152
            :.:||:.|.|||.|..|.|.......|..::|||.|.||||||||||:|||::..::|| :...|
 Frog  1255 ELDWPTNGHIEFRNVVLCYRLGLPNALDGISFTISPGEKIGIVGRTGSGKSTLFLALFRMMELKE 1319

  Fly  1153 GMIRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKALGDVELRSYVS 1217
            |.|.||:|....:.|..|||:::|||||..||||::|.||||:...:|.|:.|.|....|:..|.
 Frog  1320 GSILIDNVPSHLLNLELLRSRLAIIPQDAFLFSGSVRVNLDPLSYHTDVEILKVLDQCHLQDVVR 1384

  Fly  1218 TLIGGLNCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANVDPETDKLIQQTIRSKFAH 1282
            . ||||:..:.|.|.|||:|||||:|||||:|.|.|||.:|||||:||.:||:|:|:|||.:|..
 Frog  1385 R-IGGLDADVGDRGKNFSLGQRQLLCLARALLTHAKILCIDEATASVDHQTDELLQRTIRERFRE 1448

  Fly  1283 CTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQRTGGYLRQLV 1330
            .|||||||||:|:|||||||||.||::.||..|..|.:|......:|:
 Frog  1449 RTVLTIAHRLNTIMDSDRVLVMHAGKLVELDSPANLSKREDSNFYRLI 1496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdogNP_651678.1 MRP_assoc_pro 14..1323 CDD:188098 434/1339 (32%)
abcc10NP_001135594.1 MRP_assoc_pro 180..1484 CDD:188098 432/1334 (32%)

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